BLASTX nr result

ID: Coptis23_contig00002512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002512
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523824.1| conserved hypothetical protein [Ricinus comm...   263   4e-68
ref|XP_003538110.1| PREDICTED: uncharacterized protein LOC100782...   248   8e-64
ref|XP_004140159.1| PREDICTED: uncharacterized protein LOC101218...   247   2e-63
gb|AFK41071.1| unknown [Medicago truncatula]                          243   3e-62
ref|XP_002299780.1| predicted protein [Populus trichocarpa] gi|2...   240   3e-61

>ref|XP_002523824.1| conserved hypothetical protein [Ricinus communis]
           gi|223536912|gb|EEF38550.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  263 bits (671), Expect = 4e-68
 Identities = 127/182 (69%), Positives = 149/182 (81%)
 Frame = +3

Query: 132 TDRKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTV 311
           T +KV W+W SA++G         ++ AKPKDPTFH+ISIS TSFKL++PVLDAD +LTV
Sbjct: 2   TSKKVKWSWSSALIGAASATAVTALLNAKPKDPTFHLISISFTSFKLNLPVLDADLLLTV 61

Query: 312 HVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQLIKLAGRLSGLELAHHAK 491
           HVTNPNI  I+YS T+MSIFYDGSLLGSA VEAGSQPA+SC+L++L  RL GL+LAHHA 
Sbjct: 62  HVTNPNITSIHYSSTSMSIFYDGSLLGSAQVEAGSQPARSCKLLRLQARLDGLQLAHHAS 121

Query: 492 KFLADVAKREMELDAAVDIQGTAKVLCWTHGFKVHVDSHIVVDPVFLDVIEQENKSQLQL 671
           KF +DVAKR+M LDA VDI+G AKVL W H FKVHVDSH  VDPVFLDVI+QENKSQL +
Sbjct: 122 KFFSDVAKRQMLLDAKVDIEGAAKVLWWDHKFKVHVDSHTTVDPVFLDVIDQENKSQLDV 181

Query: 672 FV 677
           FV
Sbjct: 182 FV 183


>ref|XP_003538110.1| PREDICTED: uncharacterized protein LOC100782945 [Glycine max]
          Length = 191

 Score =  248 bits (634), Expect = 8e-64
 Identities = 119/180 (66%), Positives = 145/180 (80%)
 Frame = +3

Query: 135 DRKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTVH 314
           ++K  W+W SAI+G         +I AKPKDPTFH+ISI+ TS KL+ P+LDA+ +LTVH
Sbjct: 3   NKKSKWSWSSAIIGAASAVAASALISAKPKDPTFHLISINFTSLKLNFPLLDAEVLLTVH 62

Query: 315 VTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQLIKLAGRLSGLELAHHAKK 494
           VTNPNI PI+YS T+MSIFY GSLLGSA V+AGSQP +SCQL++L  RL  LELAHHA +
Sbjct: 63  VTNPNIAPIHYSSTSMSIFYQGSLLGSAQVQAGSQPPRSCQLLRLPARLHALELAHHATR 122

Query: 495 FLADVAKREMELDAAVDIQGTAKVLCWTHGFKVHVDSHIVVDPVFLDVIEQENKSQLQLF 674
           FL DVA+REM LDAAVDI GTA+V+ W H FKVHVDSH+ VDPVFLDVI+QEN S+L++F
Sbjct: 123 FLHDVARREMFLDAAVDIAGTARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVF 182


>ref|XP_004140159.1| PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus]
           gi|449481051|ref|XP_004156067.1| PREDICTED:
           uncharacterized LOC101218134 [Cucumis sativus]
          Length = 183

 Score =  247 bits (631), Expect = 2e-63
 Identities = 118/181 (65%), Positives = 145/181 (80%)
 Frame = +3

Query: 138 RKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTVHV 317
           +K NW+W SA+VG         II AKPKDPTFH+ISI  TSFKL  PV+D + ILTVHV
Sbjct: 3   KKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHV 62

Query: 318 TNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQLIKLAGRLSGLELAHHAKKF 497
           TNPN+ PI+YS T MSIFY+GSLLGSA V+AGSQ  +SCQ+++L  RL GL+LAHH  +F
Sbjct: 63  TNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRF 122

Query: 498 LADVAKREMELDAAVDIQGTAKVLCWTHGFKVHVDSHIVVDPVFLDVIEQENKSQLQLFV 677
           ++DVAKREM LDA+VDI G A+VL W+H FKVHVDSH+ VDPVFLDV++QEN SQL+LF+
Sbjct: 123 ISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFL 182

Query: 678 D 680
           +
Sbjct: 183 N 183


>gb|AFK41071.1| unknown [Medicago truncatula]
          Length = 187

 Score =  243 bits (620), Expect = 3e-62
 Identities = 119/179 (66%), Positives = 142/179 (79%)
 Frame = +3

Query: 138 RKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTVHV 317
           +K  W+W SAI+G         I+ AKPKDPTFH+ISI+ TS K S+PV+DA+ +LTVHV
Sbjct: 5   KKSQWSWTSAIIGAASAVAATSILSAKPKDPTFHLISINFTSLKPSLPVVDAEVLLTVHV 64

Query: 318 TNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQLIKLAGRLSGLELAHHAKKF 497
           TNPNI PINYS TTMSIFY+GSLLGSA V+AGSQP +SCQL++L  RL  L LA HA + 
Sbjct: 65  TNPNIAPINYSSTTMSIFYEGSLLGSAPVQAGSQPPRSCQLLRLPARLKALRLAKHASRV 124

Query: 498 LADVAKREMELDAAVDIQGTAKVLCWTHGFKVHVDSHIVVDPVFLDVIEQENKSQLQLF 674
           ++DVAKREM LDAAVDI GTA+VL W H FKV V+SHI VDPVFLDVI+QEN +QL+LF
Sbjct: 125 MSDVAKREMVLDAAVDIAGTARVLWWDHKFKVRVNSHITVDPVFLDVIDQENTAQLELF 183


>ref|XP_002299780.1| predicted protein [Populus trichocarpa] gi|222847038|gb|EEE84585.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  240 bits (612), Expect = 3e-61
 Identities = 116/181 (64%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
 Frame = +3

Query: 138 RKVNWNWVSAIVGXXXXXXXXXIIYAKPKDPTFHVISISLTSFKLSIPVLDADFILTVHV 317
           +KV W+W +A+VG         +I AKPKDPTFH+I I+ TSFKL  PV+D D ILTVHV
Sbjct: 3   KKVKWSWTAALVGAASATAAVALISAKPKDPTFHLIKINFTSFKLRFPVIDTDVILTVHV 62

Query: 318 TNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQPAKSCQLIKLAGRLSGLEL-AHHAKK 494
           TNPNI+PI+YS T MSIFYDGSL+GSA VEAGSQ ++SCQ+++L  RL G+EL A+H+ K
Sbjct: 63  TNPNIIPIHYSSTIMSIFYDGSLIGSAQVEAGSQRSRSCQILELTARLDGVELMANHSVK 122

Query: 495 FLADVAKREMELDAAVDIQGTAKVLCWTHGFKVHVDSHIVVDPVFLDVIEQENKSQLQLF 674
           F +DVAKREM LDA VDI GTA++L W H F VHVDSHI VDP+FLD+I+QENKS+L +F
Sbjct: 123 FFSDVAKREMVLDAKVDIGGTARLLWWGHRFNVHVDSHITVDPLFLDIIDQENKSRLDVF 182

Query: 675 V 677
           +
Sbjct: 183 L 183


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