BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002511
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520196.1| conserved hypothetical protein [Ricinus comm...   283   4e-74
ref|XP_002314629.1| SIN3 component, histone deacetylase complex ...   277   3e-72
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...   276   9e-72
emb|CBI32068.3| unnamed protein product [Vitis vinifera]              276   9e-72
ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein ...   269   1e-69

>ref|XP_002520196.1| conserved hypothetical protein [Ricinus communis]
            gi|223540688|gb|EEF42251.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1452

 Score =  283 bits (725), Expect = 4e-74
 Identities = 150/260 (57%), Positives = 178/260 (68%), Gaps = 5/260 (1%)
 Frame = +1

Query: 7    KKSSLSDERKWRTSKDLGQPDYYARLLNAIYNLIDGTSDNTKFEDECRAIVGTQAYILFT 186
            K +S S ERKWR S D    D YAR ++A+YNL+DG+SDNTKFED+CRAI+GTQ+Y+LFT
Sbjct: 1196 KINSSSAERKWRASNDTNPTDLYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFT 1255

Query: 187  LDKLIHKLVKQLQTVATDEMDNKLLQLHAYENSRKPIRFVDSVYHENARV-LHDENIYRF 363
            LDKLI+KLVKQLQTVA+DEMDNKLLQL+AYE SRKP RF+D VYHENAR+ LHDENIYR 
Sbjct: 1256 LDKLIYKLVKQLQTVASDEMDNKLLQLYAYEKSRKPGRFIDVVYHENARILLHDENIYRI 1315

Query: 364  ECSSSPTRLSIQLMDYGYEKPEVTAVSIDPNFAGYLHDDFLSXXXXXXXXXXXXXXXXXX 543
            EC S+PT LSIQLMD+G++KPEVTAVS+DPNFA YLH++FLS                  
Sbjct: 1316 ECCSTPTHLSIQLMDFGHDKPEVTAVSMDPNFAAYLHNEFLSIVPDKKEKSGIFLKRNKH 1375

Query: 544  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVSYVLDTEDYLYRMKRKQR----KLSCHDQ 711
                                         KVSYVLDTED+L+R KR++R      SCHDQ
Sbjct: 1376 RCGSHDESQTMEGFQVLNGLECKIACNSSKVSYVLDTEDFLFRTKRRKRTPQPNSSCHDQ 1435

Query: 712  ANRSNGNALKVHRFHRFLSS 771
               S     KV +FHR+LSS
Sbjct: 1436 TKISK----KVEQFHRWLSS 1451


>ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
            gi|222863669|gb|EEF00800.1| SIN3 component, histone
            deacetylase complex [Populus trichocarpa]
          Length = 1385

 Score =  277 bits (709), Expect = 3e-72
 Identities = 151/260 (58%), Positives = 174/260 (66%), Gaps = 5/260 (1%)
 Frame = +1

Query: 7    KKSSLSDERKWRTSKDLGQPDYYARLLNAIYNLIDGTSDNTKFEDECRAIVGTQAYILFT 186
            K +S S ERKWR S D    D YAR ++A+YNL+DG+SDNTKFED+CRAI+GTQ+Y+LFT
Sbjct: 1129 KVNSSSAERKWRASNDTSPTDLYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFT 1188

Query: 187  LDKLIHKLVKQLQTVATDEMDNKLLQLHAYENSRKPIRFVDSVYHENARV-LHDENIYRF 363
            LDKLI+KLVKQLQTVA DEMDNKLLQL+AYE SRKP R VD VYHENARV LHDENIYR 
Sbjct: 1189 LDKLIYKLVKQLQTVAADEMDNKLLQLYAYEKSRKPGRLVDIVYHENARVLLHDENIYRI 1248

Query: 364  ECSSSPTRLSIQLMDYGYEKPEVTAVSIDPNFAGYLHDDFLSXXXXXXXXXXXXXXXXXX 543
            ECSS+PT LSIQLMD+G++KPEVTAVS+DPNFA YL +DFL                   
Sbjct: 1249 ECSSAPTHLSIQLMDFGHDKPEVTAVSMDPNFASYLLNDFLPVVPDKKEKPGIFLKRNKR 1308

Query: 544  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVSYVLDTEDYLYRMKRKQRKL----SCHDQ 711
                                         KVSYVLDTED+L+R  RK R L    SCH+Q
Sbjct: 1309 RNANSDECQAMEGFRVFNGLECKIACNSSKVSYVLDTEDFLFRTGRKSRTLQQNGSCHNQ 1368

Query: 712  ANRSNGNALKVHRFHRFLSS 771
               S     +V RFHR+LSS
Sbjct: 1369 EKISK----RVQRFHRWLSS 1384


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
            vinifera]
          Length = 1421

 Score =  276 bits (705), Expect = 9e-72
 Identities = 147/249 (59%), Positives = 172/249 (69%), Gaps = 8/249 (3%)
 Frame = +1

Query: 7    KKSSLSDERKWRTSKDLGQPDYYARLLNAIYNLIDGTSDNTKFEDECRAIVGTQAYILFT 186
            K +S S ERKWR S D    D YAR +NA+YNL+DG+SDNTKFED+CRAI+GTQ+Y+LFT
Sbjct: 1153 KLNSSSGERKWRASSDTNSTDLYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFT 1212

Query: 187  LDKLIHKLVKQLQTVATDEMDNKLLQLHAYENSRKPIRFVDSVYHENARV-LHDENIYRF 363
            LDKLI+KLVKQLQTVATDEMDNKLLQL+AYE SRKP RFVD VY+EN+RV LHDENIYR 
Sbjct: 1213 LDKLIYKLVKQLQTVATDEMDNKLLQLYAYEKSRKPGRFVDMVYYENSRVLLHDENIYRI 1272

Query: 364  ECSSSPTRLSIQLMDYGYEKPEVTAVSIDPNFAGYLHDDFLS---XXXXXXXXXXXXXXX 534
            ECSS+PT L+IQLMD G++KPEVTAVS+DPNFA YL+ DFLS                  
Sbjct: 1273 ECSSAPTHLTIQLMDNGHDKPEVTAVSMDPNFAAYLNSDFLSVVNEKKKSGIFLRRNKRK 1332

Query: 535  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVSYVLDTEDYLYRMKRKQ----RKLSC 702
                                            KVSYVLDTED+L+R+++K+    RK SC
Sbjct: 1333 YARGDEFSVACQAMEGLQVVNGLECKIACSSSKVSYVLDTEDFLFRVRKKRKTSVRKSSC 1392

Query: 703  HDQANRSNG 729
            HDQA  SNG
Sbjct: 1393 HDQAKSSNG 1401


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  276 bits (705), Expect = 9e-72
 Identities = 147/249 (59%), Positives = 172/249 (69%), Gaps = 8/249 (3%)
 Frame = +1

Query: 7    KKSSLSDERKWRTSKDLGQPDYYARLLNAIYNLIDGTSDNTKFEDECRAIVGTQAYILFT 186
            K +S S ERKWR S D    D YAR +NA+YNL+DG+SDNTKFED+CRAI+GTQ+Y+LFT
Sbjct: 1177 KLNSSSGERKWRASSDTNSTDLYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFT 1236

Query: 187  LDKLIHKLVKQLQTVATDEMDNKLLQLHAYENSRKPIRFVDSVYHENARV-LHDENIYRF 363
            LDKLI+KLVKQLQTVATDEMDNKLLQL+AYE SRKP RFVD VY+EN+RV LHDENIYR 
Sbjct: 1237 LDKLIYKLVKQLQTVATDEMDNKLLQLYAYEKSRKPGRFVDMVYYENSRVLLHDENIYRI 1296

Query: 364  ECSSSPTRLSIQLMDYGYEKPEVTAVSIDPNFAGYLHDDFLS---XXXXXXXXXXXXXXX 534
            ECSS+PT L+IQLMD G++KPEVTAVS+DPNFA YL+ DFLS                  
Sbjct: 1297 ECSSAPTHLTIQLMDNGHDKPEVTAVSMDPNFAAYLNSDFLSVVNEKKKSGIFLRRNKRK 1356

Query: 535  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVSYVLDTEDYLYRMKRKQ----RKLSC 702
                                            KVSYVLDTED+L+R+++K+    RK SC
Sbjct: 1357 YARGDEFSVACQAMEGLQVVNGLECKIACSSSKVSYVLDTEDFLFRVRKKRKTSVRKSSC 1416

Query: 703  HDQANRSNG 729
            HDQA  SNG
Sbjct: 1417 HDQAKSSNG 1425


>ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine
            max]
          Length = 1367

 Score =  269 bits (687), Expect = 1e-69
 Identities = 146/262 (55%), Positives = 177/262 (67%), Gaps = 8/262 (3%)
 Frame = +1

Query: 7    KKSSLSDERKWRTSKDLGQPDYYARLLNAIYNLIDGTSDNTKFEDECRAIVGTQAYILFT 186
            K +S S E+KWR S D G  D Y R ++A+YNL+DG+SD+TKFED+CRAI+GTQ+Y+LFT
Sbjct: 1105 KVNSSSAEKKWRASNDTGSSDQYGRFMDALYNLLDGSSDSTKFEDDCRAIIGTQSYVLFT 1164

Query: 187  LDKLIHKLVKQLQTVATDEMDNKLLQLHAYENSRKPIRFVDSVYHENARV-LHDENIYRF 363
            LDKLI+KLVKQLQ VAT+E+DNKLLQL+AYENSRKP RFVD VYHENARV LHDENIYR 
Sbjct: 1165 LDKLIYKLVKQLQAVATEEIDNKLLQLYAYENSRKPGRFVDLVYHENARVLLHDENIYRI 1224

Query: 364  ECSSSPTRL-SIQLMDYGYEKPEVTAVSIDPNFAGYLHDDFLS--XXXXXXXXXXXXXXX 534
            ECS +PT+L SIQLMDYGY+KPE+TAVS+DPNF+ YLH+DFLS                 
Sbjct: 1225 ECSPAPTQLSSIQLMDYGYDKPELTAVSMDPNFSAYLHNDFLSVVPDKMEKSGIYLKRNK 1284

Query: 535  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVSYVLDTEDYLYRMKRKQRKL----SC 702
                                            KVSYVLDTED+L+R +RK+R L    SC
Sbjct: 1285 RKYAISDEYSSQTLDGLEIINGLECKIVCNSSKVSYVLDTEDFLHRTRRKRRTLHQSSSC 1344

Query: 703  HDQANRSNGNALKVHRFHRFLS 768
            H+QA  S   + +  RF +  S
Sbjct: 1345 HEQAKSSIICSSRAQRFCKLFS 1366