BLASTX nr result

ID: Coptis23_contig00002501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002501
         (3562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ72834.1| FRIGIDA-like protein [Aquilegia formosa]               533   e-148
ref|XP_002523550.1| peptidyl-prolyl cis-trans isomerase, putativ...   369   4e-99
ref|XP_003535048.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   360   1e-96
ref|XP_002309317.1| predicted protein [Populus trichocarpa] gi|2...   357   1e-95
ref|XP_003546604.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   357   2e-95

>gb|ADZ72834.1| FRIGIDA-like protein [Aquilegia formosa]
          Length = 641

 Score =  533 bits (1373), Expect = e-148
 Identities = 313/599 (52%), Positives = 385/599 (64%), Gaps = 10/599 (1%)
 Frame = +3

Query: 1395 SLESLNELFGLSAALSIFTRRYNELRKHMELIEKDIDNMHKQLNDKESQVSA-----LPN 1559
            SL+S+NELFGLS+ALSIFTRR+NEL+KHME I+K ID+M+KQ   KES V A     +PN
Sbjct: 53   SLKSMNELFGLSSALSIFTRRFNELQKHMEFIDKSIDDMYKQQKGKESVVVAPVPVSVPN 112

Query: 1560 ASTSCPGAPLLLSADLANGGSAKDKTCKETSSSTIESLCQTMGSRGFRKYIRTHMSDIXX 1739
            ASTS  G+ ++ +A+  +  SAK +T KE  SSTI++LC+TMGSRG RKYI  HMSDI  
Sbjct: 113  ASTS--GSQIVSNANQTSANSAKAETSKEACSSTIDNLCETMGSRGVRKYITMHMSDIEK 170

Query: 1740 XXXXXXXXXXCTANPPKFVLDSIGRFYLQGSKAFTEHSLINSNRLAALFILECFLLTDCT 1919
                         NP K VL+ IGRFYLQGSKAF + S +  NR A+L ILE FLLTDCT
Sbjct: 171  LREEVTAAINRAPNPSKLVLECIGRFYLQGSKAFAKDSPMILNRQASLLILEFFLLTDCT 230

Query: 1920 SVVQSVKEEAEVAAIAWRKRLIQEGGVSNSSNTDAQGLLLFLASFGIPSGFGNEDLIELF 2099
            S+  SVKEEA  AAI WRKRL+ EGG+S ++N DA+GLLLF+AS+GIPS F N+DLI+L 
Sbjct: 231  SIDPSVKEEANKAAILWRKRLLNEGGLSTATNADARGLLLFVASYGIPSDFENQDLIQLI 290

Query: 2100 HLGYAKEVSCALRRSPFLMERIPDIIRGLVKKGMCMVAVDAAYSFGVDEMFPAETILTPY 2279
             L  AKE+S ALRRS  L+++IPDII  +VKKGMC+ AVDAAY+FGV+E    ETILT Y
Sbjct: 291  RLSNAKEISNALRRSRVLVQKIPDIIHAMVKKGMCLAAVDAAYTFGVEEKLSPETILTLY 350

Query: 2280 LQESQETWERERKDLRGLPGALREVYQKHLAALKAVRKSLEDYKIDPVKLVGWS-NVKIA 2456
            LQ S+  W+  RKD +G P AL+   +K LAA K   K LEDYKI+P+KL GW+ N KIA
Sbjct: 351  LQNSEAAWKTARKDSQGNPVALKAADEKQLAAYKFAMKCLEDYKINPMKLSGWNINDKIA 410

Query: 2457 EMEKDISDLQKAIAEK--VKRKVEGFDSSTILKPKEVKRPRTSDIVLPQMPSKLMPSQEQ 2630
             +EKDISD ++ I EK  +KRK +G +SS   K ++ K PR S  + PQM  K M  QEQ
Sbjct: 411  TLEKDISDHERVIDEKGHLKRKADGVNSSQ-FKNQDAKHPRMSTGLSPQMHPKYMLPQEQ 469

Query: 2631 GSFG-HDRKTLNDGGSSGQLNGH-XXXXXXXXXXXXXXXXEMLHINIPXXXXXXXXXXXX 2804
             +FG +D +T  DGG S QLNG+                  +LH  +P            
Sbjct: 470  RAFGINDPQTFYDGGLSSQLNGYSGMSSVTGPTYPGAAGVGVLHRIVPGSVAGTSLGS-- 527

Query: 2805 XIPKGNGNVHHLGPLSWNTNVSGPVHLTSHDDRLYGWHEDGTLNDHSMGHNFTSFRTFPG 2984
                G G V H         V G VH T+H    Y WH DG LNDH   HNF   +T  G
Sbjct: 528  --TAGAGGVLH---------VDGLVHTTNHSGGPYPWHGDGALNDHLFRHNFMGPQTISG 576

Query: 2985 SGFLGSASAMDQGFSGLPSTSIGSGNSNSKADLYHFADTVL*GESYHNSSCSGSYYLAP 3161
             G  GS S M+QGFSG PS+SI  G  NS ADLY FAD VL  E+Y  SS + + Y+AP
Sbjct: 577  RGLFGSGSTMEQGFSGQPSSSIAFGTRNSSADLYQFADAVLEREAY-KSSRTANTYMAP 634


>ref|XP_002523550.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223537257|gb|EEF38889.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 296

 Score =  369 bits (946), Expect = 4e-99
 Identities = 179/238 (75%), Positives = 202/238 (84%)
 Frame = +1

Query: 193 QPDVTITDRVYIDLSICPNYFRTDRTLGDDEYTACEETEALGRVVIGLYGKQVPLTVSNF 372
           QPD TITDRVY+D S+CPNYFR DRTL D   + C E+  LGRV++GLYG+ VPLTVSNF
Sbjct: 55  QPDTTITDRVYMDFSLCPNYFRPDRTLSDTVSSLCTESTPLGRVILGLYGRLVPLTVSNF 114

Query: 373 KQMCIGTSTGSSYKGTLVHKIFPGEFFIAGKQGRRDKGEVKPPYDQLPRNTETVESKAFL 552
           K MC    T SSYK TLVHKIFPG+FF+AG+QGRRDKGEV+ P + L RNTETV+SKAF 
Sbjct: 115 KTMC----TSSSYKNTLVHKIFPGQFFLAGRQGRRDKGEVRVPLE-LVRNTETVDSKAFK 169

Query: 553 LQHSRPGVVSLCLSENDDDDEIKLDPEYRNVEFLITTGPAPTPQLDGGNIVFGTVLEGLD 732
           L HSRPG+VSLCLSENDD+D++KLDP YRNVEFLITTGP P+PQLD  NIVFG VLEGLD
Sbjct: 170 LTHSRPGIVSLCLSENDDEDDVKLDPNYRNVEFLITTGPGPSPQLDSKNIVFGVVLEGLD 229

Query: 733 VVTTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGELKVAK 906
           VVT IA+IPTYKPS+RIRQFNDLA F GDERAQ+AR+ WNRPLKTV+ISDCGEL V K
Sbjct: 230 VVTAIASIPTYKPSERIRQFNDLASFLGDERAQNARSSWNRPLKTVFISDCGELNVTK 287


>ref|XP_003535048.1| PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Glycine max]
          Length = 287

 Score =  360 bits (925), Expect = 1e-96
 Identities = 180/244 (73%), Positives = 202/244 (82%), Gaps = 2/244 (0%)
 Frame = +1

Query: 181 TPTRQPDV-TITDRVYIDLSICPNYFRTDRTLGDDEYTACEETEALGRVVIGLYGKQVPL 357
           TP   P   T+TDRV++D S+CPN F  DR   D     C +T  LGRVV+GLYG  VPL
Sbjct: 39  TPISTPTTPTVTDRVFMDFSLCPNNFLPDRA--DSLSPLCSDTTLLGRVVLGLYGNLVPL 96

Query: 358 TVSNFKQMCIG-TSTGSSYKGTLVHKIFPGEFFIAGKQGRRDKGEVKPPYDQLPRNTETV 534
           TVSNFK MC+G  ST SSYK TLVHK+FPG++F+AG+QGR DKGEV+PP+D LPRNT+TV
Sbjct: 97  TVSNFKSMCLGLNSTSSSYKNTLVHKVFPGQYFLAGRQGRPDKGEVRPPHD-LPRNTDTV 155

Query: 535 ESKAFLLQHSRPGVVSLCLSENDDDDEIKLDPEYRNVEFLITTGPAPTPQLDGGNIVFGT 714
            +KAF L HSRPGVVSL LSENDDDDEIKLDP YRNVEFLITTGP P PQLD  NIVFGT
Sbjct: 156 AAKAFALTHSRPGVVSLSLSENDDDDEIKLDPGYRNVEFLITTGPGPCPQLDNKNIVFGT 215

Query: 715 VLEGLDVVTTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGEL 894
           VLEGLDV+T IA+IPTY PS+RIRQFNDLA+FFGDERAQ+ARNIWNRPLK+VYISDCGEL
Sbjct: 216 VLEGLDVITAIASIPTYLPSERIRQFNDLAQFFGDERAQNARNIWNRPLKSVYISDCGEL 275

Query: 895 KVAK 906
           KV K
Sbjct: 276 KVTK 279


>ref|XP_002309317.1| predicted protein [Populus trichocarpa] gi|222855293|gb|EEE92840.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  357 bits (917), Expect = 1e-95
 Identities = 178/236 (75%), Positives = 198/236 (83%)
 Frame = +1

Query: 199 DVTITDRVYIDLSICPNYFRTDRTLGDDEYTACEETEALGRVVIGLYGKQVPLTVSNFKQ 378
           D TITDRV++D SIC NYFR DRTL D   T C ++  LGR+V+GLYG  VPLTVSNFK 
Sbjct: 30  DTTITDRVFLDFSICSNYFRPDRTLSDTFSTLCTDSTPLGRLVLGLYGHLVPLTVSNFKT 89

Query: 379 MCIGTSTGSSYKGTLVHKIFPGEFFIAGKQGRRDKGEVKPPYDQLPRNTETVESKAFLLQ 558
           MC    T  SYK TLVHKIFPG+FF+AG+QGRR+KGEVK P D L RN E+V+SKAF L 
Sbjct: 90  MC----TSYSYKNTLVHKIFPGQFFLAGRQGRREKGEVKVPQD-LARNIESVDSKAFKLT 144

Query: 559 HSRPGVVSLCLSENDDDDEIKLDPEYRNVEFLITTGPAPTPQLDGGNIVFGTVLEGLDVV 738
           HS PG++SLCLSENDD+D IKL+PEYRNVEFLITTGP P PQLD  NIVFG VLEGLDVV
Sbjct: 145 HSGPGILSLCLSENDDEDNIKLNPEYRNVEFLITTGPGPCPQLDYKNIVFGVVLEGLDVV 204

Query: 739 TTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGELKVAK 906
           T+IA+IPTYKPSDRIRQFNDLAEF GDERAQ+AR IWN+PLKTVYISDCGELKVAK
Sbjct: 205 TSIASIPTYKPSDRIRQFNDLAEFLGDERAQNARTIWNKPLKTVYISDCGELKVAK 260


>ref|XP_003546604.1| PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Glycine max]
          Length = 286

 Score =  357 bits (915), Expect = 2e-95
 Identities = 178/244 (72%), Positives = 202/244 (82%), Gaps = 3/244 (1%)
 Frame = +1

Query: 184 PTRQPDV-TITDRVYIDLSICPNYFRTDRTLGDDEYTACEETEALGRVVIGLYGKQVPLT 360
           PT  P   T+TDRV++D S+CPN F  DR   D     C ++  LGRVV+GLYG  VPLT
Sbjct: 38  PTPIPTTPTVTDRVFMDFSLCPNNFLPDRA--DALSPLCSDSNLLGRVVLGLYGNLVPLT 95

Query: 361 VSNFKQMCIG--TSTGSSYKGTLVHKIFPGEFFIAGKQGRRDKGEVKPPYDQLPRNTETV 534
           VSNFK MC+G   +T SSYK TLVHK+FPG++F+AG+QGR DKGEV+PP+D LPRNTETV
Sbjct: 96  VSNFKSMCLGGLNATSSSYKNTLVHKVFPGQYFLAGRQGRPDKGEVRPPHD-LPRNTETV 154

Query: 535 ESKAFLLQHSRPGVVSLCLSENDDDDEIKLDPEYRNVEFLITTGPAPTPQLDGGNIVFGT 714
           ++KAF L HSRPGVVSL LSENDDDDEIKLDP YRNVEFLITTGP P PQLD  NIVFGT
Sbjct: 155 DAKAFALTHSRPGVVSLSLSENDDDDEIKLDPGYRNVEFLITTGPGPCPQLDNKNIVFGT 214

Query: 715 VLEGLDVVTTIAAIPTYKPSDRIRQFNDLAEFFGDERAQSARNIWNRPLKTVYISDCGEL 894
           VLEGLDV+T IA+IPTY+PS+RIRQFNDLA FFGDERAQ+ARNIWNRPL +VYISDCGEL
Sbjct: 215 VLEGLDVITAIASIPTYQPSERIRQFNDLARFFGDERAQNARNIWNRPLTSVYISDCGEL 274

Query: 895 KVAK 906
           KV K
Sbjct: 275 KVTK 278


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