BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002479
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   600   e-169
ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...   595   e-168
ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-li...   594   e-167
emb|CBI20795.3| unnamed protein product [Vitis vinifera]              593   e-167
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   593   e-167

>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
            gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
            Full=Retinoblastoma-related protein
            gi|223530511|gb|EEF32393.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1020

 Score =  600 bits (1548), Expect = e-169
 Identities = 296/376 (78%), Positives = 335/376 (89%), Gaps = 3/376 (0%)
 Frame = +1

Query: 1    KGSSMYNSLIVARPALSAEINRLGLLAEPMPSLDAIALHYNISFGSLPPLPSLHKHE-TP 177
            KGSSMYNSL VARP+LSAEINRLGLLAEPMPSLDAIA+H N S G LPPL S+ KHE +P
Sbjct: 608  KGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAIAVHINFSSGGLPPLSSVSKHEISP 667

Query: 178  GQNGDIRSPKRACGEYRSVLVERNSFTSPLKDRLLGFNSLKPKLLGPPLQSAFASPTRPN 357
            GQNGDIRSPKR C +YRSVLVERNSFTSP+KDRLL F +LK KL  PPLQSAFASPTRPN
Sbjct: 668  GQNGDIRSPKRPCTDYRSVLVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRPN 727

Query: 358  PGGGGETCAETGINVFFTKILKLAAVRINGLIERLKLNQ-HIRETVYCLVQQILSQRTAL 534
            PGGGGETCAETGIN+FF+KI KLAAVRING++ERL+ +Q HIRE VY L QQ+LSQ+T+L
Sbjct: 728  PGGGGETCAETGINIFFSKINKLAAVRINGMVERLQQSQQHIRENVYRLFQQVLSQQTSL 787

Query: 535  FFNRHIDQIILCSLYGVSKISQLDLKFKEIVYNYRKQPQCKPQVFRSVFVNWSSARHNAK 714
            FFNRHIDQIILC  YGV+KIS+++L F+EI+YNYRKQPQCKPQVFRSVFV+WSSARHN +
Sbjct: 788  FFNRHIDQIILCCFYGVAKISKVNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARHNGR 847

Query: 715  TGQEHVDIITFYNEIFVPSVKPLLVELGPAGATLKSDLVPQVSKKNDGQCPGSPRVSSFP 894
            TGQ+HVDIITFYNEIF+P+ KPLLVE+G AG T+K   VP+V+   DGQCP SP+VS FP
Sbjct: 848  TGQDHVDIITFYNEIFIPAAKPLLVEVGSAGITVKGSQVPEVNNNKDGQCPASPKVSPFP 907

Query: 895  TLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAIND 1074
            +LPDMSPKKVS+AHNVYVSPLR+SKMDALISHSS+SYYACVGESTHAYQSPSKDLTAIN+
Sbjct: 908  SLPDMSPKKVSAAHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINN 967

Query: 1075 RLNG-KKVNSRLNFDD 1119
            RLNG + +   LNFDD
Sbjct: 968  RLNGNRNIRGSLNFDD 983


>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score =  595 bits (1534), Expect = e-168
 Identities = 290/375 (77%), Positives = 334/375 (89%), Gaps = 2/375 (0%)
 Frame = +1

Query: 1    KGSSMYNSLIVARPALSAEINRLGLLAEPMPSLDAIALHYNISFGSLPPLPSLHKHET-P 177
            KGSS+YNSLIVA+P L AEINRLGLLAEPMPSLDAIA+  N S   +   P+L KHE+ P
Sbjct: 714  KGSSIYNSLIVAKPGLGAEINRLGLLAEPMPSLDAIAVQINFSGIGVSATPNLQKHESLP 773

Query: 178  GQNGDIRSPKRACGEYRSVLVERNSFTSPLKDRLLGFNSLKPKLLGPPLQSAFASPTRPN 357
            GQNGDIRSPKR C + RSVLVERNSFTSP+KDRL+ F+S+K KLL PPLQSAFASPTRPN
Sbjct: 774  GQNGDIRSPKRLCTDLRSVLVERNSFTSPVKDRLMAFSSIKSKLLPPPLQSAFASPTRPN 833

Query: 358  PGGGGETCAETGINVFFTKILKLAAVRINGLIERLKLNQHIRETVYCLVQQILSQRTALF 537
            PGGGGETCAETGIN+FF+KI KLAAVR+NG++ERL+L+  IRE VYCL QQILSQ+T++ 
Sbjct: 834  PGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQLSHQIRENVYCLFQQILSQKTSIL 893

Query: 538  FNRHIDQIILCSLYGVSKISQLDLKFKEIVYNYRKQPQCKPQVFRSVFVNWSSARHNAKT 717
            FNRHIDQIILC  YGV+KISQL L F+EI+YNYRKQPQCKPQVFR+VFV+WSSAR N ++
Sbjct: 894  FNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQPQCKPQVFRNVFVDWSSARRNGRS 953

Query: 718  GQEHVDIITFYNEIFVPSVKPLLVELGPAGATLKSDLVPQVSKKNDGQCPGSPRVSSFPT 897
            GQ+HVDIITFYNEIF+PSVKPLLVE+GPAG+T+K+D VPQV+  +D  CPGSP++S FP+
Sbjct: 954  GQDHVDIITFYNEIFIPSVKPLLVEIGPAGSTMKTDRVPQVNNDSDAPCPGSPKLSPFPS 1013

Query: 898  LPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAINDR 1077
            LPDMSPKKVSSAHNVYVSPLRSSKMDALISHSS+SYYACVGESTHA+QSPSKDLTAIN+R
Sbjct: 1014 LPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAFQSPSKDLTAINNR 1073

Query: 1078 LNG-KKVNSRLNFDD 1119
            LNG +K+   LNFDD
Sbjct: 1074 LNGTRKLRGTLNFDD 1088


>ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1024

 Score =  594 bits (1531), Expect = e-167
 Identities = 289/375 (77%), Positives = 334/375 (89%), Gaps = 2/375 (0%)
 Frame = +1

Query: 1    KGSSMYNSLIVARPALSAEINRLGLLAEPMPSLDAIALHYNISFGSLPPLPSLHKHET-P 177
            KGSS+YNSLIVA+P L AEINRLGLLAEPMPSLDAIA+  N S   +   P+L +HE+ P
Sbjct: 613  KGSSIYNSLIVAKPGLGAEINRLGLLAEPMPSLDAIAVQINFSGIGVSATPNLQRHESLP 672

Query: 178  GQNGDIRSPKRACGEYRSVLVERNSFTSPLKDRLLGFNSLKPKLLGPPLQSAFASPTRPN 357
            GQNGDIRSPKR C + RSVLVERNSFTSP+KDRL+ F+S+K KLL PPLQSAFASPTRPN
Sbjct: 673  GQNGDIRSPKRLCTDLRSVLVERNSFTSPVKDRLMAFSSIKSKLLPPPLQSAFASPTRPN 732

Query: 358  PGGGGETCAETGINVFFTKILKLAAVRINGLIERLKLNQHIRETVYCLVQQILSQRTALF 537
            PGGGGETCAETGIN+FF+KI KLAAVR+NG++ERL+L+  IRE VYCL QQILSQ+T++ 
Sbjct: 733  PGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQLSHQIRENVYCLFQQILSQKTSIL 792

Query: 538  FNRHIDQIILCSLYGVSKISQLDLKFKEIVYNYRKQPQCKPQVFRSVFVNWSSARHNAKT 717
            FNRHIDQIILC  YGV+KISQL L F+EI+YNYRKQPQCKPQVFR+VFV+WSSAR N ++
Sbjct: 793  FNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQPQCKPQVFRNVFVDWSSARRNGRS 852

Query: 718  GQEHVDIITFYNEIFVPSVKPLLVELGPAGATLKSDLVPQVSKKNDGQCPGSPRVSSFPT 897
            GQ+HVDIITFYNEIF+PSVKPLLVE+GPAG+T+K+D VPQV+  +D  CPGSP++S FP+
Sbjct: 853  GQDHVDIITFYNEIFIPSVKPLLVEIGPAGSTMKTDRVPQVNNDSDAPCPGSPKLSPFPS 912

Query: 898  LPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAINDR 1077
            LPDMSPKKVSSAHNVYVSPLRSSKMDALISHSS+SYYACVGESTHA+QSPSKDLTAIN+R
Sbjct: 913  LPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAFQSPSKDLTAINNR 972

Query: 1078 LNG-KKVNSRLNFDD 1119
            LNG +K+   LNFDD
Sbjct: 973  LNGTRKLRGTLNFDD 987


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  593 bits (1530), Expect = e-167
 Identities = 290/376 (77%), Positives = 335/376 (89%), Gaps = 3/376 (0%)
 Frame = +1

Query: 1    KGSSMYNSLIVARPALSAEINRLGLLAEPMPSLDAIALHYNISFGSLPPLPSLHKHET-P 177
            KGSSMYNSLIVAR ALSAE+NRLGLLAEPMPSLDAI++H N S G LPP+PSL K E+ P
Sbjct: 595  KGSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSP 654

Query: 178  GQNGDIRSPKRACGEYRSVLVERNSFTSPLKDRLLGFNSLKPKLLGPPLQSAFASPTRPN 357
            GQNGDIRSPKR C +YRSVLVERNSFTSP+KDR L  N+LK KL  PPLQSAFASPTRPN
Sbjct: 655  GQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPN 714

Query: 358  PGGGGETCAETGINVFFTKILKLAAVRINGLIERLKLNQHIRETVYCLVQQILSQRTALF 537
            PG  GETCAETGIN+FF+KI+KLAAVRING++ERL+L+Q +RE VYCL QQIL++RT+LF
Sbjct: 715  PGREGETCAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLF 774

Query: 538  FNRHIDQIILCSLYGVSKISQLDLKFKEIVYNYRKQPQCKPQVFRSVFVNWSSARHNAKT 717
            FNRHIDQIILC  YG++KISQ++L F+EI++NYRKQPQCKPQ+FRSVFV+WSSAR N KT
Sbjct: 775  FNRHIDQIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKT 834

Query: 718  GQEHVDIITFYNEIFVPSVKPLLVELGP-AGATLKSDLVPQVSKKNDGQCPGSPRVSSFP 894
            G+EHVDIITFYNEIF+P+VKPLL+E+GP  G T K++ VP+V+  ND QCP SP++S FP
Sbjct: 835  GKEHVDIITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPFP 894

Query: 895  TLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAIND 1074
            +LPDMSPKKVS+AHNVYVSPLRSSKMDALISHSS+SYYACVGESTHAYQSPSKDLTAIN+
Sbjct: 895  SLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINN 954

Query: 1075 RLNG-KKVNSRLNFDD 1119
            RLN  +K+   LNFDD
Sbjct: 955  RLNSTRKLRGALNFDD 970


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
            gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
            Full=Retinoblastoma-related protein
            gi|359392418|gb|AEV45768.1| RBR protein [Vitis
            pseudoreticulata]
          Length = 1007

 Score =  593 bits (1530), Expect = e-167
 Identities = 290/376 (77%), Positives = 335/376 (89%), Gaps = 3/376 (0%)
 Frame = +1

Query: 1    KGSSMYNSLIVARPALSAEINRLGLLAEPMPSLDAIALHYNISFGSLPPLPSLHKHET-P 177
            KGSSMYNSLIVAR ALSAE+NRLGLLAEPMPSLDAI++H N S G LPP+PSL K E+ P
Sbjct: 596  KGSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSP 655

Query: 178  GQNGDIRSPKRACGEYRSVLVERNSFTSPLKDRLLGFNSLKPKLLGPPLQSAFASPTRPN 357
            GQNGDIRSPKR C +YRSVLVERNSFTSP+KDR L  N+LK KL  PPLQSAFASPTRPN
Sbjct: 656  GQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPN 715

Query: 358  PGGGGETCAETGINVFFTKILKLAAVRINGLIERLKLNQHIRETVYCLVQQILSQRTALF 537
            PG  GETCAETGIN+FF+KI+KLAAVRING++ERL+L+Q +RE VYCL QQIL++RT+LF
Sbjct: 716  PGREGETCAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLF 775

Query: 538  FNRHIDQIILCSLYGVSKISQLDLKFKEIVYNYRKQPQCKPQVFRSVFVNWSSARHNAKT 717
            FNRHIDQIILC  YG++KISQ++L F+EI++NYRKQPQCKPQ+FRSVFV+WSSAR N KT
Sbjct: 776  FNRHIDQIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKT 835

Query: 718  GQEHVDIITFYNEIFVPSVKPLLVELGP-AGATLKSDLVPQVSKKNDGQCPGSPRVSSFP 894
            G+EHVDIITFYNEIF+P+VKPLL+E+GP  G T K++ VP+V+  ND QCP SP++S FP
Sbjct: 836  GKEHVDIITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPFP 895

Query: 895  TLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAIND 1074
            +LPDMSPKKVS+AHNVYVSPLRSSKMDALISHSS+SYYACVGESTHAYQSPSKDLTAIN+
Sbjct: 896  SLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINN 955

Query: 1075 RLNG-KKVNSRLNFDD 1119
            RLN  +K+   LNFDD
Sbjct: 956  RLNSTRKLRGALNFDD 971