BLASTX nr result

ID: Coptis23_contig00002470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002470
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like...   280   2e-73
gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia fordii]           280   2e-73
ref|NP_001237682.1| uncharacterized protein LOC100527293 [Glycin...   280   3e-73
ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinu...   279   4e-73
ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3-like...   278   9e-73

>ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis sativus]
           gi|449521585|ref|XP_004167810.1| PREDICTED: 60S
           ribosomal protein L27a-3-like [Cucumis sativus]
          Length = 146

 Score =  280 bits (717), Expect = 2e-73
 Identities = 128/142 (90%), Positives = 136/142 (95%)
 Frame = -1

Query: 744 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 565
           MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 564 FHKLRNKFYCPIVNIDKLWSLVPQEAKDKATKDNAPVLDVTQMGYFKVLGKGMLPVNQPI 385
           FHKLRNKFYCPIVN+DK+WSL+PQE KDKA+KDN P++DVTQ GYFKVLGKG+LP NQPI
Sbjct: 61  FHKLRNKFYCPIVNVDKIWSLIPQEVKDKASKDNVPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 384 VVKAKLISKTAEKKIKEAGGAV 319
           VVKAKL+SK AEKKIKEAGGAV
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAV 142


>gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia fordii]
          Length = 146

 Score =  280 bits (716), Expect = 2e-73
 Identities = 130/142 (91%), Positives = 135/142 (95%)
 Frame = -1

Query: 744 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 565
           MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 564 FHKLRNKFYCPIVNIDKLWSLVPQEAKDKATKDNAPVLDVTQMGYFKVLGKGMLPVNQPI 385
           FHKLRNKFYCPIVNIDKLWS+VPQE KDKA+KDN P+LDVTQ GYFKVLGKG+LP NQPI
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSMVPQEVKDKASKDNVPMLDVTQFGYFKVLGKGVLPENQPI 120

Query: 384 VVKAKLISKTAEKKIKEAGGAV 319
           VVKAKL+SK AEKKIKE GGAV
Sbjct: 121 VVKAKLVSKIAEKKIKENGGAV 142


>ref|NP_001237682.1| uncharacterized protein LOC100527293 [Glycine max]
           gi|255632023|gb|ACU16364.1| unknown [Glycine max]
          Length = 146

 Score =  280 bits (715), Expect = 3e-73
 Identities = 130/142 (91%), Positives = 136/142 (95%)
 Frame = -1

Query: 744 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 565
           MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPG+FGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60

Query: 564 FHKLRNKFYCPIVNIDKLWSLVPQEAKDKATKDNAPVLDVTQMGYFKVLGKGMLPVNQPI 385
           FHKLRNKFYCPIVNIDKLWSL+PQEAKDKAT D AP+LDVTQ GYFKVLGKG+LP NQP+
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSLLPQEAKDKATADKAPLLDVTQFGYFKVLGKGVLPQNQPL 120

Query: 384 VVKAKLISKTAEKKIKEAGGAV 319
           VVKAKL+SK AEKKIKEAGGAV
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAV 142


>ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinus communis]
           gi|223532700|gb|EEF34482.1| 60S ribosomal protein L27a,
           putative [Ricinus communis]
          Length = 146

 Score =  279 bits (714), Expect = 4e-73
 Identities = 128/142 (90%), Positives = 135/142 (95%)
 Frame = -1

Query: 744 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 565
           MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 564 FHKLRNKFYCPIVNIDKLWSLVPQEAKDKATKDNAPVLDVTQMGYFKVLGKGMLPVNQPI 385
           FHKLRNKFYCPIVNIDKLWS++P++ KDKA KDN P+LDVTQ GYFKVLGKG+LP NQPI
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSMIPEDVKDKANKDNVPLLDVTQFGYFKVLGKGVLPENQPI 120

Query: 384 VVKAKLISKTAEKKIKEAGGAV 319
           VVKAKL+SK AEKKIKEAGGAV
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAV 142


>ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis sativus]
           gi|449487742|ref|XP_004157778.1| PREDICTED: 60S
           ribosomal protein L27a-3-like [Cucumis sativus]
          Length = 146

 Score =  278 bits (711), Expect = 9e-73
 Identities = 128/142 (90%), Positives = 135/142 (95%)
 Frame = -1

Query: 744 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 565
           MTTR KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 564 FHKLRNKFYCPIVNIDKLWSLVPQEAKDKATKDNAPVLDVTQMGYFKVLGKGMLPVNQPI 385
           FHKLRNKFYCPIVN+DKLWSLVPQE KDKA+KDN P++DVTQ GYFKVLGKG+LP N+P+
Sbjct: 61  FHKLRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENKPV 120

Query: 384 VVKAKLISKTAEKKIKEAGGAV 319
           VVKAKLISK AEKKIKE GGAV
Sbjct: 121 VVKAKLISKIAEKKIKENGGAV 142


Top