BLASTX nr result

ID: Coptis23_contig00002467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002467
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276425.1| PREDICTED: uncharacterized protein LOC100253...   264   4e-68
ref|XP_003553753.1| PREDICTED: uncharacterized protein LOC100779...   263   7e-68
ref|XP_003521741.1| PREDICTED: uncharacterized protein LOC100790...   260   5e-67
emb|CAN65204.1| hypothetical protein VITISV_016716 [Vitis vinifera]   260   5e-67
ref|XP_003556486.1| PREDICTED: uncharacterized protein LOC100817...   249   1e-63

>ref|XP_002276425.1| PREDICTED: uncharacterized protein LOC100253879 [Vitis vinifera]
          Length = 395

 Score =  264 bits (674), Expect = 4e-68
 Identities = 162/308 (52%), Positives = 189/308 (61%), Gaps = 20/308 (6%)
 Frame = +1

Query: 214  PFDDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFN 393
            PFD+SRRLFQRLWTDEDEI LLQGFLEY++QRG   +S++HHDT  FYDQIKSKLQLDFN
Sbjct: 118  PFDESRRLFQRLWTDEDEIELLQGFLEYSAQRGP-NSSSHHHDTTAFYDQIKSKLQLDFN 176

Query: 394  KNQLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWN---------EXXX 546
            KNQLVEKLRRLKKKYRNV++RISSGKE SFK+PHDQ+TFEISRKIW+         E   
Sbjct: 177  KNQLVEKLRRLKKKYRNVVSRISSGKEFSFKSPHDQSTFEISRKIWSTTTAITGVPEETV 236

Query: 547  XXXXXXXXXXN--VNMSDAINGTHVIFN--------AEKKVGXXXXXXXXXXXXXTIXXX 696
                      N   N S   N T   FN        AEKKV               +   
Sbjct: 237  LEDDDANPNPNPTTNPSPNPNPTPKGFNSYSIDVNSAEKKVPRSRKRSRAKLDEKPV--- 293

Query: 697  XXXXXXNVTDAVNLMNCPVNSSVPSVIEDTVRSCLSPLFKELMASAI-XXXXXXXXXXXX 873
                       +N  N  + SS+PS+IE+TVRSCLSPLFKEL+ +A+             
Sbjct: 294  -----------LNNQNHEMPSSIPSLIEETVRSCLSPLFKELLHNAVNGPSCGARGFGGM 342

Query: 874  XLNPFAMNFGGGGDSSSMLGFLSGGEKEVMDEKWRKQQILELEVYSKRVELVQDQIKLAL 1053
             LNP  ++FGG                EV DE+WRKQQILELEVYSKR+ELVQ+QI+ AL
Sbjct: 343  ALNPMPLSFGG---------------TEVTDERWRKQQILELEVYSKRLELVQEQIRSAL 387

Query: 1054 EELRSAGS 1077
            +ELR  GS
Sbjct: 388  QELRGMGS 395


>ref|XP_003553753.1| PREDICTED: uncharacterized protein LOC100779712 [Glycine max]
          Length = 404

 Score =  263 bits (672), Expect = 7e-68
 Identities = 164/321 (51%), Positives = 187/321 (58%), Gaps = 34/321 (10%)
 Frame = +1

Query: 220  DDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFNKN 399
            DDSRRLFQRLWTDEDEI LLQGFL+YTSQRG    S++H+DTA FYDQIKSKLQLDFNKN
Sbjct: 103  DDSRRLFQRLWTDEDEIELLQGFLDYTSQRG----SSHHNDTALFYDQIKSKLQLDFNKN 158

Query: 400  QLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWNE---------XXXXX 552
            QLVEK+RRLKKKYRNV+N+I SGKE SFK+ HDQATFEISRKIW+               
Sbjct: 159  QLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSNVTPIGDNSLDDDEI 218

Query: 553  XXXXXXXXNVNMSDAINGTHVIFN--AEKKV----------------GXXXXXXXXXXXX 678
                    N+N S  I    +IF   AEKK                 G            
Sbjct: 219  NPNRSPNPNLNFSPIILKNEMIFRNPAEKKTPKRSRPRSAVKIEPNDGSASNRDHDCISN 278

Query: 679  XTIXXXXXXXXXNVTDAVNLMNCPVNS----SVPSVIEDTVRSCLSPLFKELMASAIXXX 846
             T          N T      N   NS    ++PS+IE+TVRSCLSP+ KELMA A+   
Sbjct: 279  ATPTATATAAATNTTPTAATTNDNCNSGYGNNIPSMIEETVRSCLSPVLKELMAGAMGGG 338

Query: 847  XXXXXXXXXXLNPFAM---NFGGGGDSSSMLGFLSGGEKEVMDEKWRKQQILELEVYSKR 1017
                      LNP  +   +FGGG               E++DEKWRKQQILELEVYSKR
Sbjct: 339  AFGARGFSLNLNPMPLMNWSFGGG---------------EMVDEKWRKQQILELEVYSKR 383

Query: 1018 VELVQDQIKLALEELRSAGSG 1080
            +ELVQDQIK A+EELRS G G
Sbjct: 384  LELVQDQIKAAMEELRSHGGG 404


>ref|XP_003521741.1| PREDICTED: uncharacterized protein LOC100790030 [Glycine max]
          Length = 405

 Score =  260 bits (665), Expect = 5e-67
 Identities = 161/323 (49%), Positives = 186/323 (57%), Gaps = 34/323 (10%)
 Frame = +1

Query: 214  PFDDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFN 393
            P DDSRRLFQRLWTDEDEI LLQGFL+YTSQRG    S++H+DTA FYDQIKSKLQLDFN
Sbjct: 100  PLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRG----SSHHNDTALFYDQIKSKLQLDFN 155

Query: 394  KNQLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWNE---------XXX 546
            KNQLVEK+RRLKKKYRNV+N+I SGKE SFK+ HDQATFEISRKIW+             
Sbjct: 156  KNQLVEKIRRLKKKYRNVLNKICSGKEFSFKSAHDQATFEISRKIWSNVTPVGDNSLDDD 215

Query: 547  XXXXXXXXXXNVNMSDAINGTHVIF--NAEKKV--------------GXXXXXXXXXXXX 678
                      N+N S  I     IF  + EKK                            
Sbjct: 216  EINPSRSPNPNLNFSPVILKNETIFRNSTEKKTPKRSRPRSAVKIEPNDGSASNRDHNCI 275

Query: 679  XTIXXXXXXXXXNVTDAV------NLMNCPVNSSVPSVIEDTVRSCLSPLFKELMASAIX 840
                        N T A       N  N    +++PS+IE+TV+SCLSP+ KELMA A+ 
Sbjct: 276  SNTTPTATAAATNTTAAAAAGTNNNNCNSGYGNNIPSLIEETVKSCLSPVLKELMAGAMG 335

Query: 841  XXXXXXXXXXXXLNPFA---MNFGGGGDSSSMLGFLSGGEKEVMDEKWRKQQILELEVYS 1011
                        LNP     ++FGGG               E++DEKWRKQQILELEVYS
Sbjct: 336  GGAFGGRGFSLNLNPMPFMNLSFGGG---------------EMVDEKWRKQQILELEVYS 380

Query: 1012 KRVELVQDQIKLALEELRSAGSG 1080
            KR+ELVQDQIK A+EELRS G G
Sbjct: 381  KRLELVQDQIKAAMEELRSHGGG 403


>emb|CAN65204.1| hypothetical protein VITISV_016716 [Vitis vinifera]
          Length = 424

 Score =  260 bits (665), Expect = 5e-67
 Identities = 160/304 (52%), Positives = 187/304 (61%), Gaps = 20/304 (6%)
 Frame = +1

Query: 214  PFDDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFN 393
            PFD+SRRLFQRLWTDEDEI LLQGFLEY++QRG   +S++HHDT  FYDQIKSKLQLDFN
Sbjct: 118  PFDESRRLFQRLWTDEDEIELLQGFLEYSAQRGP-NSSSHHHDTTAFYDQIKSKLQLDFN 176

Query: 394  KNQLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWN---------EXXX 546
            KNQLVEKLRRLKKKYRNV++RISSGKE SFK+PHDQ+TFEISRKIW+         E   
Sbjct: 177  KNQLVEKLRRLKKKYRNVVSRISSGKEFSFKSPHDQSTFEISRKIWSTTTAITGVPEETV 236

Query: 547  XXXXXXXXXXN--VNMSDAINGTHVIFN--------AEKKVGXXXXXXXXXXXXXTIXXX 696
                      N   N S   N T   FN        AEKKV               +   
Sbjct: 237  LEDDDANPNPNPTTNPSPNPNPTPKGFNSYSIDVNSAEKKVPRSRKRSRAKLDEKPV--- 293

Query: 697  XXXXXXNVTDAVNLMNCPVNSSVPSVIEDTVRSCLSPLFKELMASAI-XXXXXXXXXXXX 873
                       +N  N  + SS+PS+IE+TVRSCLSPLFKEL+ +A+             
Sbjct: 294  -----------LNNQNHEMPSSIPSLIEETVRSCLSPLFKELLHNAVNGPSCGARGFGGM 342

Query: 874  XLNPFAMNFGGGGDSSSMLGFLSGGEKEVMDEKWRKQQILELEVYSKRVELVQDQIKLAL 1053
             LNP  ++FGG                EV DE+WRKQQILELEVYSKR+ELVQ+QI+ AL
Sbjct: 343  ALNPMPLSFGG---------------TEVTDERWRKQQILELEVYSKRLELVQEQIRSAL 387

Query: 1054 EELR 1065
            +ELR
Sbjct: 388  QELR 391


>ref|XP_003556486.1| PREDICTED: uncharacterized protein LOC100817182 [Glycine max]
          Length = 353

 Score =  249 bits (636), Expect = 1e-63
 Identities = 147/287 (51%), Positives = 178/287 (62%)
 Frame = +1

Query: 220  DDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGGFKNSAYHHDTAPFYDQIKSKLQLDFNKN 399
            DDSRRLFQRLWTDEDEIGLLQGFLEYT+QRG    S++H+DTA FYDQIKSKLQL FNKN
Sbjct: 86   DDSRRLFQRLWTDEDEIGLLQGFLEYTAQRG----SSHHNDTALFYDQIKSKLQLGFNKN 141

Query: 400  QLVEKLRRLKKKYRNVMNRISSGKEISFKTPHDQATFEISRKIWNEXXXXXXXXXXXXXN 579
            QLVEKLRRLKKKYRNV+N+ISSGKE+SFK+PHD+ATFEISR+IW+               
Sbjct: 142  QLVEKLRRLKKKYRNVLNKISSGKEVSFKSPHDRATFEISRRIWSNTAPITGPVEDDDEI 201

Query: 580  VNMSDAINGTHVIFNAEKKVGXXXXXXXXXXXXXTIXXXXXXXXXNVTDAVNLMNCPVNS 759
            +   +  N   +  + ++                +          N  +  N  NC    
Sbjct: 202  ITNPNFGNSAKMPISRKRS-----RPQKRELNDGSTLNRDNNCNSNSNNNNNNENCNSRL 256

Query: 760  SVPSVIEDTVRSCLSPLFKELMASAIXXXXXXXXXXXXXLNPFAMNFGGGGDSSSMLGFL 939
            ++  +IE+TVRSC+SP+ KEL                  LNP  M         S++   
Sbjct: 257  NLQGLIEETVRSCVSPVLKELACGT----GGMGLGRGFALNPLQMPM-----PMSLMNLG 307

Query: 940  SGGEKEVMDEKWRKQQILELEVYSKRVELVQDQIKLALEELRSAGSG 1080
              GE   MDEKWRKQQILELEVYSKR+ELVQ++IK+ALEELRSAG G
Sbjct: 308  IVGE-TAMDEKWRKQQILELEVYSKRLELVQNEIKVALEELRSAGGG 353


Top