BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002463
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [V...   378   e-102
ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis ...   374   e-101
ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [C...   366   6e-99
gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]          349   9e-94
ref|XP_003554046.1| PREDICTED: 50S ribosomal protein L25-like [G...   345   1e-92

>ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
            gi|297735240|emb|CBI17602.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  378 bits (970), Expect = e-102
 Identities = 194/253 (76%), Positives = 214/253 (84%), Gaps = 10/253 (3%)
 Frame = -1

Query: 1204 RPLLRKAIHLRFFFSQAVVQELE----------IEGFPKPDPKHDETIIAIPRSISGKNI 1055
            R +L  A+HLR F   A    L+          +EGFP+PDPK  E I AIPR+ISGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 1054 SAKERKVGRVPSIVFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRPD 875
            SAKERKVGRVPSIVFEQE G+ GGNKRLISVRTNQI+KLVNHLGRSFFLSRLF+LEV PD
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVGPD 126

Query: 874  FESDEIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKKG 695
            FES+E+IEK+RVLPRKLHLHAGTDAVLNVTF+RAPS ALLKVDVPLVFRGEDV PGLKKG
Sbjct: 127  FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 694  AYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCNV 515
            AYLNTI RTVKYLCPADI+PPYIDVDLSELD GQKIV GDL VHPALKLL+SK+E VC +
Sbjct: 187  AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 514  KGARVTTEQKKSK 476
             G RV ++Q+KSK
Sbjct: 247  MGTRV-SDQRKSK 258


>ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
            gi|297742259|emb|CBI34408.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  374 bits (960), Expect = e-101
 Identities = 192/253 (75%), Positives = 213/253 (84%), Gaps = 10/253 (3%)
 Frame = -1

Query: 1204 RPLLRKAIHLRFFFSQAVVQELE----------IEGFPKPDPKHDETIIAIPRSISGKNI 1055
            R +L  A+HLR F   A    L+          +EGFP+PDPK  E I AIPR+ISGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 1054 SAKERKVGRVPSIVFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRPD 875
            SAKERKVGRVPSIVFEQE G+ GGNKRLISV+TNQI+KLVNHLGRSFFLSRLF+LEV P 
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLFDLEVGPH 126

Query: 874  FESDEIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKKG 695
            FES+E+IEK+RVLPRKLHLHAGTDAVLNVTF+RAPS ALLKVDVPLVFRGEDV PGLKKG
Sbjct: 127  FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 694  AYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCNV 515
            AYLNTI RTVKYLCPADI+PPYIDVDLSELD GQKIV GDL VHPALKLL+SK+E VC +
Sbjct: 187  AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 514  KGARVTTEQKKSK 476
             G RV ++Q+KSK
Sbjct: 247  MGTRV-SDQRKSK 258


>ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
            gi|449494761|ref|XP_004159639.1| PREDICTED: 50S ribosomal
            protein L25-like [Cucumis sativus]
          Length = 260

 Score =  366 bits (940), Expect = 6e-99
 Identities = 179/220 (81%), Positives = 202/220 (91%)
 Frame = -1

Query: 1135 IEGFPKPDPKHDETIIAIPRSISGKNISAKERKVGRVPSIVFEQEKGEEGGNKRLISVRT 956
            +EGFPKPDPK+ ETI+AIPRSISGK+ISAKERK GRVPSIVFEQE G+ GGNKRLISVRT
Sbjct: 41   LEGFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRT 100

Query: 955  NQIKKLVNHLGRSFFLSRLFNLEVRPDFESDEIIEKIRVLPRKLHLHAGTDAVLNVTFMR 776
            NQI KLV +LGRSFFLSRLF+LEV  DFES +I+EK+RVLPRK+HLHAGTDA LNVTF+R
Sbjct: 101  NQIVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIR 160

Query: 775  APSSALLKVDVPLVFRGEDVCPGLKKGAYLNTINRTVKYLCPADIVPPYIDVDLSELDVG 596
            APS A+LKVDVPLVFRGEDVCPGL+KG+YLNTI RTVKYLCPADI+PPYIDVDLSELDVG
Sbjct: 161  APSHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVG 220

Query: 595  QKIVRGDLNVHPALKLLQSKEEAVCNVKGARVTTEQKKSK 476
            QK+V GDL VHPALKL++SK+E VC + GARV+ +QKKSK
Sbjct: 221  QKLVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK 260


>gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]
          Length = 251

 Score =  349 bits (895), Expect = 9e-94
 Identities = 181/251 (72%), Positives = 210/251 (83%), Gaps = 5/251 (1%)
 Frame = -1

Query: 1213 LIQRPLLRKAIH---LRFFFSQA--VVQELEIEGFPKPDPKHDETIIAIPRSISGKNISA 1049
            LI+R  L  ++H   LRFF + A  VV       FPKPDPK+DETI AI R+ SGKNI+A
Sbjct: 2    LIRRVALTASLHHYHLRFFSNSAAAVVLPYPEPEFPKPDPKYDETIHAIARAKSGKNIAA 61

Query: 1048 KERKVGRVPSIVFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRPDFE 869
            KERK GRVPSIVFEQE G+ GGNKRLISV+ NQI+KLVNHLGRS FLSRLF+LEVRPDF+
Sbjct: 62   KERKAGRVPSIVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRSHFLSRLFDLEVRPDFD 121

Query: 868  SDEIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKKGAY 689
            S E++EK+RVLPRK+HL AG+DA LNVTF+RAPSSALLKVDVPL+FRGEDV PGLKKG+Y
Sbjct: 122  SVEVVEKVRVLPRKVHLEAGSDAPLNVTFIRAPSSALLKVDVPLIFRGEDVSPGLKKGSY 181

Query: 688  LNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCNVKG 509
            LN I RTVKYLCPAD++PPYIDVDLSELDVGQK+V GDL VHPALKL+Q K+  V  + G
Sbjct: 182  LNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVQPKDHPVVKIMG 241

Query: 508  ARVTTEQKKSK 476
            ARV ++QKK+K
Sbjct: 242  ARV-SDQKKAK 251


>ref|XP_003554046.1| PREDICTED: 50S ribosomal protein L25-like [Glycine max]
          Length = 257

 Score =  345 bits (886), Expect = 1e-92
 Identities = 178/256 (69%), Positives = 208/256 (81%), Gaps = 10/256 (3%)
 Frame = -1

Query: 1219 MWLIQRPLLRKAIHLRFFFSQAVVQELE---------IEGFPKPDPKHDETIIAIPRSIS 1067
            M+L +  +L +    R  FS +    L          ++GFP+PDPKHDETI+AIPR+ S
Sbjct: 1    MYLPRHHILTRLSPYRRHFSHSAAAVLRPPGPEPLTYLDGFPRPDPKHDETILAIPRADS 60

Query: 1066 GKNISAKERKVGRVPSIVFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLE 887
            GKNISAKER+ GR+PSIVFEQE G+ GGNKRLISVRT+QI+KLVNHLGRSFFLSRLF+L+
Sbjct: 61   GKNISAKERRAGRLPSIVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLQ 120

Query: 886  VRPDFES-DEIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCP 710
            VR  F+S D+ +E +RVLPR +HL AGTDA LNVTF+RAPS+ALLKVDVPLVFRGEDV P
Sbjct: 121  VRAHFDSEDDFVETVRVLPRAIHLKAGTDAPLNVTFIRAPSNALLKVDVPLVFRGEDVSP 180

Query: 709  GLKKGAYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEE 530
            GLKKGA LNTI RTVKYLCPADI+PPYIDVDLSELDVGQK+V GDL VHPALKLLQS++E
Sbjct: 181  GLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSRDE 240

Query: 529  AVCNVKGARVTTEQKK 482
            AV  + G RV+  QKK
Sbjct: 241  AVVKIMGQRVSELQKK 256