BLASTX nr result

ID: Coptis23_contig00002456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002456
         (2210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV64030.1| 5-enolpyruvylshikimate 3-phosphate synthase [Camp...   593   e-167
gb|ABA54869.1| putative 5-enolpyruvylshikimate 3-phosphate synth...   587   e-165
ref|XP_002280922.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyl...   582   e-163
ref|XP_003521857.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyl...   579   e-162
sp|P11043.1|AROA_PETHY RecName: Full=3-phosphoshikimate 1-carbox...   578   e-162

>gb|AAV64030.1| 5-enolpyruvylshikimate 3-phosphate synthase [Camptotheca acuminata]
          Length = 519

 Score =  593 bits (1529), Expect = e-167
 Identities = 321/428 (75%), Positives = 351/428 (82%), Gaps = 6/428 (1%)
 Frame = +2

Query: 101  MAQVSNMARCLQTGNNFITDLPKSGNAKALNCIRIGSESKSL-SLVFGRKAVKFNN-NSK 274
            MAQVSN+   +Q G+ F  + PK+ N+  +  +  GS+ KS   L  GR AV     N +
Sbjct: 1    MAQVSNIPNGVQNGH-FRPNFPKTQNSVQVYSVFCGSKLKSSWCLNHGRVAVNSPVINVR 59

Query: 275  CGFRVDASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLLAALSEGTTVLD 454
               RV AS V   EK S  PEIVLQPIKEISG VKLPGSKSLSNRILLLAALSEGTTV+D
Sbjct: 60   VPLRVSAS-VVTTEKTSMTPEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVD 118

Query: 455  NLLNSEDIHYMLAALKTLGLQLEVDSANNRAVVEGCGGQFPVGKESTEEVQLFLGNAGTA 634
            NLLNS+D+HYML AL+TLGL++E DSA  RA+VEGC G FPVGKEST+EVQLFLGNAGTA
Sbjct: 119  NLLNSDDVHYMLGALRTLGLRVEEDSAIKRAIVEGCSGLFPVGKESTDEVQLFLGNAGTA 178

Query: 635  MRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTNCPPVRVNGN 814
            MRPLTAAV AAGGN+ Y+LDGVPRMRERPIGDLV GLKQLGADVDCFLGTNCPPVRV G 
Sbjct: 179  MRPLTAAVTAAGGNSSYILDGVPRMRERPIGDLVTGLKQLGADVDCFLGTNCPPVRVIGK 238

Query: 815  GGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMERFGVS 994
            GGLPGGKVKLSG+ISSQYLT+LLMAAPLALGDVEIEIIDKLISIPYVEMTLKLM+RFGV+
Sbjct: 239  GGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMKRFGVT 298

Query: 995  VEHSDSWDHFLVRGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXXXXXXXSSLQGD 1174
            VEHSD+WD FL++GGQKYKSPGN++VEGDASSASYFL                 SSLQGD
Sbjct: 299  VEHSDNWDRFLIQGGQKYKSPGNSYVEGDASSASYFLAGAAVTGGTITVEGCGSSSLQGD 358

Query: 1175 VKFAEVLEMMGAKVTWSENSVTVTGPPRG----KRLHAVDVNMNKMPDVAMTLAVVALFA 1342
            VKFAEVLE MGAKVTW+ENSVTVTGPPR     K L AVDVNMNKMPDVAMTLAVVALFA
Sbjct: 359  VKFAEVLEKMGAKVTWTENSVTVTGPPRNSSGRKHLRAVDVNMNKMPDVAMTLAVVALFA 418

Query: 1343 DGPTAIRD 1366
            DGPTAIRD
Sbjct: 419  DGPTAIRD 426


>gb|ABA54869.1| putative 5-enolpyruvylshikimate 3-phosphate synthase [Fagus
            sylvatica]
          Length = 520

 Score =  587 bits (1513), Expect = e-165
 Identities = 317/429 (73%), Positives = 347/429 (80%), Gaps = 7/429 (1%)
 Frame = +2

Query: 101  MAQVSNMARCLQTGNNFITDLPKSGNAKALNCIRIGSE--SKSLSLVFGRKAVKFNNNSK 274
            MAQVS +    Q+   F  + PK    K++  I  GS+    S S     K V    ++K
Sbjct: 1    MAQVSKICSGAQSTQIFHNN-PKPQKPKSIGFISFGSQLLGSSTSWTLKNKHVCAVGSAK 59

Query: 275  CG-FRVDASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLLAALSEGTTVL 451
             G FRV AS VA AEKPS VPEIVLQPIK+ISG +KLPGSKSLSNRILLLAALSEGTTV+
Sbjct: 60   VGTFRVSAS-VATAEKPSTVPEIVLQPIKDISGTIKLPGSKSLSNRILLLAALSEGTTVV 118

Query: 452  DNLLNSEDIHYMLAALKTLGLQLEVDSANNRAVVEGCGGQFPVGKESTEEVQLFLGNAGT 631
            DNLLNS+DIHYML ALKTLGL++E D A  RA+VEGCGG FPVGKES +E+QLFLGNAGT
Sbjct: 119  DNLLNSDDIHYMLGALKTLGLRVEEDKAIKRAIVEGCGGLFPVGKESRDEIQLFLGNAGT 178

Query: 632  AMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTNCPPVRVNG 811
            AMRPLTAAV  AGGN+ YVLDGVPRMRERPIGDLV GL+QLGA+VDCFLGT CPPVRV G
Sbjct: 179  AMRPLTAAVTVAGGNSSYVLDGVPRMRERPIGDLVDGLQQLGANVDCFLGTKCPPVRVFG 238

Query: 812  NGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMERFGV 991
             GGLPGGKVKLSG+ISSQYLT+L+MAAPLALGDVEIEIIDKLIS+PYVEMTLKLMERFG+
Sbjct: 239  KGGLPGGKVKLSGSISSQYLTALVMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGI 298

Query: 992  SVEHSDSWDHFLVRGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXXXXXXXSSLQG 1171
            SVEH+DSWD FL+RGGQKYKSPGNA+VEGDASSASYFL                 SSLQG
Sbjct: 299  SVEHNDSWDRFLIRGGQKYKSPGNAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQG 358

Query: 1172 DVKFAEVLEMMGAKVTWSENSVTVTGPP----RGKRLHAVDVNMNKMPDVAMTLAVVALF 1339
            DVKFAEVLE MGAKVTWSE SVTVTGPP    + K L A+DVNMNKMPDVAMTLAVVALF
Sbjct: 359  DVKFAEVLEKMGAKVTWSETSVTVTGPPQDSSKKKHLRAIDVNMNKMPDVAMTLAVVALF 418

Query: 1340 ADGPTAIRD 1366
            ADGPTAIRD
Sbjct: 419  ADGPTAIRD 427


>ref|XP_002280922.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase,
            chloroplastic [Vitis vinifera]
            gi|296089200|emb|CBI38903.3| unnamed protein product
            [Vitis vinifera] gi|323695712|gb|ACY29662.2|
            5-enolpyruvylshikimate-3-phosphate synthase [Vitis
            vinifera]
          Length = 521

 Score =  582 bits (1499), Expect = e-163
 Identities = 306/394 (77%), Positives = 325/394 (82%), Gaps = 4/394 (1%)
 Frame = +2

Query: 197  IRIGSESKSLSLVFGRKAVKFNNNSKCGFRVDASSVAAAEKPSKVPEIVLQPIKEISGVV 376
            +R G    S SL   R       + +  FRV AS VA  EKPS  PEIVLQPIKEISG +
Sbjct: 36   LRSGPNVSSFSLKHERAVSNSIVSVRAPFRVSAS-VATKEKPSTAPEIVLQPIKEISGTI 94

Query: 377  KLPGSKSLSNRILLLAALSEGTTVLDNLLNSEDIHYMLAALKTLGLQLEVDSANNRAVVE 556
             LPGSKSLSNRILLLAALSEGTTV+DNLLNSED+HYML AL+TLGL +E  S N R +V+
Sbjct: 95   TLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLGALRTLGLHVEEQSENKRVIVQ 154

Query: 557  GCGGQFPVGKESTEEVQLFLGNAGTAMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLV 736
            GCGGQFP G  S  EVQLFLGNAGTAMRPLTAAV AAGGNA YVLDGVPRMRERPIGDLV
Sbjct: 155  GCGGQFPAGNGSVGEVQLFLGNAGTAMRPLTAAVTAAGGNASYVLDGVPRMRERPIGDLV 214

Query: 737  VGLKQLGADVDCFLGTNCPPVRVNGNGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVE 916
             GLKQLGADV+CFLGTNCPPVRVNGNGGLPGGKVKLSG+ISSQYLT+LLMAAPLALGDVE
Sbjct: 215  TGLKQLGADVNCFLGTNCPPVRVNGNGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVE 274

Query: 917  IEIIDKLISIPYVEMTLKLMERFGVSVEHSDSWDHFLVRGGQKYKSPGNAFVEGDASSAS 1096
            IEIIDKLISIPYVEMTLKLMERFGVSVEHS++WD FL+RGGQKYKSPGNAFVEGDASSAS
Sbjct: 275  IEIIDKLISIPYVEMTLKLMERFGVSVEHSNTWDRFLIRGGQKYKSPGNAFVEGDASSAS 334

Query: 1097 YFLXXXXXXXXXXXXXXXXXSSLQGDVKFAEVLEMMGAKVTWSENSVTVTGPPRG----K 1264
            YFL                 SSLQGDVKFAEVLE MGAKV+W ENSVTVTGPPR     K
Sbjct: 335  YFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEQMGAKVSWMENSVTVTGPPRDSSGRK 394

Query: 1265 RLHAVDVNMNKMPDVAMTLAVVALFADGPTAIRD 1366
             L A+DVNMNKMPDVAMTLAVVAL+ADGPTAIRD
Sbjct: 395  HLRAIDVNMNKMPDVAMTLAVVALYADGPTAIRD 428


>ref|XP_003521857.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase,
            chloroplastic-like [Glycine max]
          Length = 526

 Score =  579 bits (1492), Expect = e-162
 Identities = 311/433 (71%), Positives = 349/433 (80%), Gaps = 9/433 (2%)
 Frame = +2

Query: 95   SEMAQVSNMARCLQT-GNNFITDLPKSGNAKALNCIRIGSESKSLSLVFGRKAVKFNNNS 271
            +++++V N+A+  Q  G++   + PKS N+ +L   R+   SKS  LV    ++  N N+
Sbjct: 2    AQVSRVHNLAQSTQIFGHSSNPNEPKSANSVSLRP-RLWGPSKSRILVHKTGSLMGNFNA 60

Query: 272  KCG----FRVDASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLLAALSEG 439
              G    F+V AS  AAAEKPS  PEIVL+PIK+ISG + LPGSKSLSNRILLLAALSEG
Sbjct: 61   GKGNSGMFKVSASVAAAAEKPSTAPEIVLEPIKDISGTITLPGSKSLSNRILLLAALSEG 120

Query: 440  TTVLDNLLNSEDIHYMLAALKTLGLQLEVDSANNRAVVEGCGGQFPVGKESTEEVQLFLG 619
            TTV+DNLL SEDIHYML AL+TLGL++E D    +A+VEGCGG FP  KES +E+ LFLG
Sbjct: 121  TTVVDNLLYSEDIHYMLGALRTLGLRVEDDQTTKQAIVEGCGGLFPTIKESKDEINLFLG 180

Query: 620  NAGTAMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTNCPPV 799
            NAGTAMRPLTAAV+AAGGNA YVLDGVPRMRERPIGDLV GLKQLGADVDCFLGTNCPPV
Sbjct: 181  NAGTAMRPLTAAVVAAGGNASYVLDGVPRMRERPIGDLVAGLKQLGADVDCFLGTNCPPV 240

Query: 800  RVNGNGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIIDKLISIPYVEMTLKLME 979
            RVNG GGLPGGKVKLSG+ISSQYLT+LLMAAPLALGDVEIEI+DKLIS+PYVEMTLKLME
Sbjct: 241  RVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLME 300

Query: 980  RFGVSVEHSDSWDHFLVRGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXXXXXXXS 1159
            RFGVSVEHS +WD FLV GGQKYKSPGNAFVEGDASSASYFL                 +
Sbjct: 301  RFGVSVEHSGNWDKFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVNGCGTN 360

Query: 1160 SLQGDVKFAEVLEMMGAKVTWSENSVTVTGPPRG----KRLHAVDVNMNKMPDVAMTLAV 1327
            SLQGDVKFAEVLE MGAKVTWSENSVTVTGPP+     K L  +DVNMNKMPDVAMTLAV
Sbjct: 361  SLQGDVKFAEVLEKMGAKVTWSENSVTVTGPPQDSSGQKVLQGIDVNMNKMPDVAMTLAV 420

Query: 1328 VALFADGPTAIRD 1366
            VALFA+G TAIRD
Sbjct: 421  VALFANGQTAIRD 433


>sp|P11043.1|AROA_PETHY RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase,
            chloroplastic; AltName:
            Full=5-enolpyruvylshikimate-3-phosphate synthase;
            Short=EPSP synthase; Flags: Precursor
            gi|169191|gb|AAA33699.1|
            5-enolpyruvylshikimate-3-phosphate synthase precursor
            [Petunia x hybrida]
          Length = 516

 Score =  578 bits (1491), Expect = e-162
 Identities = 318/439 (72%), Positives = 344/439 (78%), Gaps = 17/439 (3%)
 Frame = +2

Query: 101  MAQVSNMARCLQTGNNFITDLPKSGNAKALNCIRIGSESKSLSLVFGRKAVKFNNNSK-- 274
            MAQ++NMA+ +QT N      P S      N  +      S  LVFG K +K + NS   
Sbjct: 1    MAQINNMAQGIQTLN------PNS------NFHKPQVPKSSSFLVFGSKKLKNSANSMLV 48

Query: 275  -----------CGFRVDASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLL 421
                       C FR+ AS VA A+KPS   EIVLQPIKEISG VKLPGSKSLSNRILLL
Sbjct: 49   LKKDSIFMQKFCSFRISAS-VATAQKPS---EIVLQPIKEISGTVKLPGSKSLSNRILLL 104

Query: 422  AALSEGTTVLDNLLNSEDIHYMLAALKTLGLQLEVDSANNRAVVEGCGGQFPVGKESTEE 601
            AALSEGTTV+DNLL+S+DIHYML ALKTLGL +E DSAN RAVVEGCGG FPVGKES EE
Sbjct: 105  AALSEGTTVVDNLLSSDDIHYMLGALKTLGLHVEEDSANQRAVVEGCGGLFPVGKESKEE 164

Query: 602  VQLFLGNAGTAMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLG 781
            +QLFLGNAGTAMRPLTAAV  AGGN+RYVLDGVPRMRERPI DLV GLKQLGA+VDCFLG
Sbjct: 165  IQLFLGNAGTAMRPLTAAVTVAGGNSRYVLDGVPRMRERPISDLVDGLKQLGAEVDCFLG 224

Query: 782  TNCPPVRVNGNGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIIDKLISIPYVEM 961
            T CPPVR+   GGLPGGKVKLSG+ISSQYLT+LLMAAPLALGDVEIEIIDKLIS+PYVEM
Sbjct: 225  TKCPPVRIVSKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEM 284

Query: 962  TLKLMERFGVSVEHSDSWDHFLVRGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXX 1141
            TLKLMERFG+SVEHS SWD F VRGGQKYKSPG AFVEGDASSASYFL            
Sbjct: 285  TLKLMERFGISVEHSSSWDRFFVRGGQKYKSPGKAFVEGDASSASYFLAGAAVTGGTITV 344

Query: 1142 XXXXXSSLQGDVKFAEVLEMMGAKVTWSENSVTVTGPPRG----KRLHAVDVNMNKMPDV 1309
                 +SLQGDVKFAEVLE MGA+VTW+ENSVTV GPPR     K L A+DVNMNKMPDV
Sbjct: 345  EGCGTNSLQGDVKFAEVLEKMGAEVTWTENSVTVKGPPRSSSGRKHLRAIDVNMNKMPDV 404

Query: 1310 AMTLAVVALFADGPTAIRD 1366
            AMTLAVVAL+ADGPTAIRD
Sbjct: 405  AMTLAVVALYADGPTAIRD 423


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