BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002439
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   182   7e-44
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...   180   3e-43
gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]      178   2e-42
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu...   176   6e-42
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]...   176   8e-42

>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  182 bits (463), Expect = 7e-44
 Identities = 98/139 (70%), Positives = 106/139 (76%), Gaps = 1/139 (0%)
 Frame = -2

Query: 659 MATSVMASLNLKPSPFLEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 483
           MA SVM+SL+LKPSPF  +  AVRG+PSLARS+SSF+V+ASG KKIKTD PYG GGGM L
Sbjct: 1   MAASVMSSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKL 60

Query: 482 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXGLLIWAVTX 303
            DGLDASGRK KGKGVYQF DKYGANVDGYSPIYSPDEW+           GLLIWAVT 
Sbjct: 61  SDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTL 120

Query: 302 XXXXXXXXXLVYNTSALAQ 246
                    LVYNTSALAQ
Sbjct: 121 AGLLLGGALLVYNTSALAQ 139


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score =  180 bits (457), Expect = 3e-43
 Identities = 96/139 (69%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = -2

Query: 659 MATSVMASLNLKPSPFLEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 483
           MATSVM+SL+LK SPFLEKSAA RG+PSLAR +SSF+V+ASG KKIKTD PYG GGGM+L
Sbjct: 1   MATSVMSSLSLKASPFLEKSAA-RGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSL 59

Query: 482 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXGLLIWAVTX 303
           RDGLDASGRKPKGKGVYQF DKYGANVDGYSPIY   +W+           GLL+WA+T 
Sbjct: 60  RDGLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAITL 119

Query: 302 XXXXXXXXXLVYNTSALAQ 246
                    LVYNTSAL+Q
Sbjct: 120 AALLLGGALLVYNTSALSQ 138


>gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 136

 Score =  178 bits (451), Expect = 2e-42
 Identities = 92/138 (66%), Positives = 106/138 (76%)
 Frame = -2

Query: 659 MATSVMASLNLKPSPFLEKSAAVRGVPSLARSTSSFKVQASGKKIKTDSPYGPGGGMNLR 480
           MA SVMASL+LKPSPF  + ++VRG+P+L+R T  FK++ASG KIKTD+PYG GGGMNLR
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASGVKIKTDTPYGTGGGMNLR 58

Query: 479 DGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXGLLIWAVTXX 300
           DGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ DEW+           GLLIWAVT  
Sbjct: 59  DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLA 118

Query: 299 XXXXXXXXLVYNTSALAQ 246
                   LVY+TSALAQ
Sbjct: 119 GILAGGALLVYSTSALAQ 136


>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
           gi|118487848|gb|ABK95747.1| unknown [Populus
           trichocarpa] gi|222875313|gb|EEF12444.1| hypothetical
           protein POPTRDRAFT_674736 [Populus trichocarpa]
          Length = 137

 Score =  176 bits (446), Expect = 6e-42
 Identities = 93/139 (66%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
 Frame = -2

Query: 659 MATSVMASLNLKPSPFLEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 483
           MA SVMASL+LKPSPF  + ++VRG+P+L+R T  FK++ASG KKIKTD+PYG GGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 482 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXGLLIWAVTX 303
           RDGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ DEW+           GLLIWAVT 
Sbjct: 59  RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTL 118

Query: 302 XXXXXXXXXLVYNTSALAQ 246
                    LVY+TSALAQ
Sbjct: 119 AGILAGGALLVYSTSALAQ 137


>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score =  176 bits (445), Expect = 8e-42
 Identities = 93/139 (66%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
 Frame = -2

Query: 659 MATSVMASLNLKPSPFLEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 483
           MA SVMASL+LKPSPF  + ++VRG+P+L+R   SFK++ASG KKIKTD+PYG GGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRR--SFKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 482 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXGLLIWAVTX 303
           RDGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ DEW+           GLLIWAVT 
Sbjct: 59  RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTL 118

Query: 302 XXXXXXXXXLVYNTSALAQ 246
                    LVY+TSALAQ
Sbjct: 119 AGILAGGALLVYSTSALAQ 137