BLASTX nr result

ID: Coptis23_contig00002437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002437
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049402.2| Os03g0219500 [Oryza sativa Japonica Group] g...   162   3e-38
ref|XP_002452501.1| hypothetical protein SORBIDRAFT_04g026980 [S...   159   2e-37
ref|NP_001151829.1| UV-induced protein uvi31 [Zea mays] gi|19564...   159   2e-37
gb|ACG26149.1| UV-induced protein uvi31 [Zea mays]                    159   2e-37
gb|ABF94677.1| BolA-like protein, expressed [Oryza sativa Japoni...   158   4e-37

>ref|NP_001049402.2| Os03g0219500 [Oryza sativa Japonica Group]
           gi|255674316|dbj|BAF11316.2| Os03g0219500, partial
           [Oryza sativa Japonica Group]
          Length = 132

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/125 (65%), Positives = 103/125 (82%), Gaps = 2/125 (1%)
 Frame = +2

Query: 17  LLLPYSPSRSYKR--REIYTTVRELKNMASRGANVLVSRASRIKNKLQSALEASILEVDD 190
           LLLP S  R Y    + I    R +  M+SRG + ++SRA+R++ KLQSALEAS L+++D
Sbjct: 6   LLLPRS-GREYAGAGKRIAAVRRTVSMMSSRGTSAMLSRAARMRQKLQSALEASALDIED 64

Query: 191 VSYQHAGHSAVKDNNNETHFNVKIVSPKFDGQSLVKRHRMVYDLLGEELDSGLHALSIVA 370
           VSYQHAGH+AVKDN NETHFN++++SPKF+GQSLVKRHRMVYDLL +EL+SGLHA+SIVA
Sbjct: 65  VSYQHAGHAAVKDNANETHFNIRVISPKFEGQSLVKRHRMVYDLLTDELNSGLHAISIVA 124

Query: 371 KTPKE 385
           KTPKE
Sbjct: 125 KTPKE 129


>ref|XP_002452501.1| hypothetical protein SORBIDRAFT_04g026980 [Sorghum bicolor]
           gi|241932332|gb|EES05477.1| hypothetical protein
           SORBIDRAFT_04g026980 [Sorghum bicolor]
          Length = 102

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/99 (76%), Positives = 91/99 (91%)
 Frame = +2

Query: 92  MASRGANVLVSRASRIKNKLQSALEASILEVDDVSYQHAGHSAVKDNNNETHFNVKIVSP 271
           MASRG + ++SRA+R++ KLQS LEAS L+++DVSYQHAGH+AVKDN NETHFNVK+VSP
Sbjct: 2   MASRGTSAVLSRAARMRQKLQSVLEASALDIEDVSYQHAGHAAVKDNANETHFNVKVVSP 61

Query: 272 KFDGQSLVKRHRMVYDLLGEELDSGLHALSIVAKTPKEV 388
           KF+GQSLVKRHRMVYDLL +EL SGLHA+SIVAKTPKE+
Sbjct: 62  KFEGQSLVKRHRMVYDLLRDELSSGLHAVSIVAKTPKEL 100


>ref|NP_001151829.1| UV-induced protein uvi31 [Zea mays] gi|195649243|gb|ACG44089.1|
           UV-induced protein uvi31 [Zea mays]
           gi|195650031|gb|ACG44483.1| UV-induced protein uvi31
           [Zea mays] gi|195657715|gb|ACG48325.1| UV-induced
           protein uvi31 [Zea mays] gi|223944215|gb|ACN26191.1|
           unknown [Zea mays] gi|413937928|gb|AFW72479.1|
           UV-induced protein uvi31 isoform 1 [Zea mays]
           gi|413937929|gb|AFW72480.1| UV-induced protein uvi31
           isoform 2 [Zea mays] gi|413937930|gb|AFW72481.1|
           UV-induced protein uvi31 isoform 3 [Zea mays]
          Length = 102

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/99 (75%), Positives = 92/99 (92%)
 Frame = +2

Query: 92  MASRGANVLVSRASRIKNKLQSALEASILEVDDVSYQHAGHSAVKDNNNETHFNVKIVSP 271
           MASRG + ++SRA+R++ KLQSALEAS L+++DVSYQHAGH+AVKDN NETHFN+K+VSP
Sbjct: 2   MASRGTSAVLSRAARMRQKLQSALEASALDIEDVSYQHAGHAAVKDNANETHFNIKVVSP 61

Query: 272 KFDGQSLVKRHRMVYDLLGEELDSGLHALSIVAKTPKEV 388
           KF+GQ+LVKRHRMVYDLL +EL SGLHA+SIVAKTPKE+
Sbjct: 62  KFEGQNLVKRHRMVYDLLRDELSSGLHAVSIVAKTPKEL 100


>gb|ACG26149.1| UV-induced protein uvi31 [Zea mays]
          Length = 101

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/99 (75%), Positives = 92/99 (92%)
 Frame = +2

Query: 92  MASRGANVLVSRASRIKNKLQSALEASILEVDDVSYQHAGHSAVKDNNNETHFNVKIVSP 271
           MASRG + ++SRA+R++ KLQSALEAS L+++DVSYQHAGH+AVKDN NETHFN+K+VSP
Sbjct: 1   MASRGTSAVLSRAARMRQKLQSALEASALDIEDVSYQHAGHAAVKDNANETHFNIKVVSP 60

Query: 272 KFDGQSLVKRHRMVYDLLGEELDSGLHALSIVAKTPKEV 388
           KF+GQ+LVKRHRMVYDLL +EL SGLHA+SIVAKTPKE+
Sbjct: 61  KFEGQNLVKRHRMVYDLLRDELSSGLHAVSIVAKTPKEL 99


>gb|ABF94677.1| BolA-like protein, expressed [Oryza sativa Japonica Group]
           gi|108706883|gb|ABF94678.1| BolA-like protein, expressed
           [Oryza sativa Japonica Group]
           gi|108706884|gb|ABF94679.1| BolA-like protein, expressed
           [Oryza sativa Japonica Group]
           gi|149391321|gb|ABR25678.1| uv-induced protein uvi31
           [Oryza sativa Indica Group] gi|215765366|dbj|BAG87063.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218192349|gb|EEC74776.1| hypothetical protein
           OsI_10551 [Oryza sativa Indica Group]
           gi|222624475|gb|EEE58607.1| hypothetical protein
           OsJ_09945 [Oryza sativa Japonica Group]
          Length = 102

 Score =  158 bits (400), Expect = 4e-37
 Identities = 73/98 (74%), Positives = 92/98 (93%)
 Frame = +2

Query: 92  MASRGANVLVSRASRIKNKLQSALEASILEVDDVSYQHAGHSAVKDNNNETHFNVKIVSP 271
           M+SRG + ++SRA+R++ KLQSALEAS L+++DVSYQHAGH+AVKDN NETHFN++++SP
Sbjct: 2   MSSRGTSAMLSRAARMRQKLQSALEASALDIEDVSYQHAGHAAVKDNANETHFNIRVISP 61

Query: 272 KFDGQSLVKRHRMVYDLLGEELDSGLHALSIVAKTPKE 385
           KF+GQSLVKRHRMVYDLL +EL+SGLHA+SIVAKTPKE
Sbjct: 62  KFEGQSLVKRHRMVYDLLTDELNSGLHAISIVAKTPKE 99


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