BLASTX nr result

ID: Coptis23_contig00002434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002434
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544803.1| PREDICTED: uncharacterized protein LOC100791...   118   6e-25
ref|XP_002301062.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
gb|ABK93831.1| unknown [Populus trichocarpa] gi|118487520|gb|ABK...   118   6e-25
ref|XP_003526575.1| PREDICTED: uncharacterized protein LOC100794...   117   7e-25
ref|XP_003544805.1| PREDICTED: uncharacterized protein LOC100792...   117   1e-24

>ref|XP_003544803.1| PREDICTED: uncharacterized protein LOC100791695 [Glycine max]
          Length = 313

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/71 (74%), Positives = 57/71 (80%)
 Frame = -2

Query: 213 SRCGTHGSAAMGSSVGRKKGTSTKFAYAWVGNSVNQCPGQCAWPFHQPIYGPQTPPLVSP 34
           SRCGTHGS    SS G  K  + KFAY WVGNS  QCPGQCAWPFHQPIYGPQ+PPLV+P
Sbjct: 161 SRCGTHGS----SSAGHAKNKNYKFAYIWVGNSEAQCPGQCAWPFHQPIYGPQSPPLVAP 216

Query: 33  NGDVGVDGMVI 1
           N DVG+DGMVI
Sbjct: 217 NNDVGIDGMVI 227


>ref|XP_002301062.1| predicted protein [Populus trichocarpa] gi|222842788|gb|EEE80335.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/71 (73%), Positives = 58/71 (81%)
 Frame = -2

Query: 213 SRCGTHGSAAMGSSVGRKKGTSTKFAYAWVGNSVNQCPGQCAWPFHQPIYGPQTPPLVSP 34
           +RCGTHGSA +GS  G  KG + +FAY WVGNS  QCPG CAWPFHQPIYGPQ PPLV+P
Sbjct: 164 NRCGTHGSA-LGSKSGNIKGKNYRFAYIWVGNSETQCPGYCAWPFHQPIYGPQNPPLVAP 222

Query: 33  NGDVGVDGMVI 1
           N DVG+DGMVI
Sbjct: 223 NNDVGLDGMVI 233


>gb|ABK93831.1| unknown [Populus trichocarpa] gi|118487520|gb|ABK95587.1| unknown
           [Populus trichocarpa]
          Length = 319

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/71 (73%), Positives = 58/71 (81%)
 Frame = -2

Query: 213 SRCGTHGSAAMGSSVGRKKGTSTKFAYAWVGNSVNQCPGQCAWPFHQPIYGPQTPPLVSP 34
           +RCGTHGSA +GS  G  KG + +FAY WVGNS  QCPG CAWPFHQPIYGPQ PPLV+P
Sbjct: 164 NRCGTHGSA-LGSKSGNIKGKNYRFAYIWVGNSETQCPGYCAWPFHQPIYGPQNPPLVAP 222

Query: 33  NGDVGVDGMVI 1
           N DVG+DGMVI
Sbjct: 223 NNDVGLDGMVI 233


>ref|XP_003526575.1| PREDICTED: uncharacterized protein LOC100794117 [Glycine max]
          Length = 324

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/72 (72%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = -2

Query: 213 SRCGTHGSAAMGSSVGRKK-GTSTKFAYAWVGNSVNQCPGQCAWPFHQPIYGPQTPPLVS 37
           SRCGTHGS++  S V +   G + KFAY WVGNS  QCPGQCAWPFHQPIYGPQ+PPLV+
Sbjct: 167 SRCGTHGSSSSASHVKKNNNGKNYKFAYIWVGNSETQCPGQCAWPFHQPIYGPQSPPLVA 226

Query: 36  PNGDVGVDGMVI 1
           PN DVG+DGMVI
Sbjct: 227 PNNDVGLDGMVI 238


>ref|XP_003544805.1| PREDICTED: uncharacterized protein LOC100792751 [Glycine max]
          Length = 316

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 56/71 (78%)
 Frame = -2

Query: 213 SRCGTHGSAAMGSSVGRKKGTSTKFAYAWVGNSVNQCPGQCAWPFHQPIYGPQTPPLVSP 34
           ++CGTHG          K G S K AYAWVGNSV QCPGQCAWPFHQP+YGPQTPPLV+P
Sbjct: 168 NQCGTHGRG--------KNGNSEKIAYAWVGNSVTQCPGQCAWPFHQPLYGPQTPPLVAP 219

Query: 33  NGDVGVDGMVI 1
           NGDVGVDGMVI
Sbjct: 220 NGDVGVDGMVI 230


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