BLASTX nr result

ID: Coptis23_contig00002433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002433
         (1608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266685.2| PREDICTED: transcription factor BIM2-like [V...   292   2e-76
ref|XP_002273274.2| PREDICTED: transcription factor BIM1-like [V...   288   3e-75
ref|XP_002278322.2| PREDICTED: transcription factor BIM2-like [V...   284   5e-74
emb|CBI16924.3| unnamed protein product [Vitis vinifera]              284   5e-74
emb|CBI15359.3| unnamed protein product [Vitis vinifera]              283   9e-74

>ref|XP_002266685.2| PREDICTED: transcription factor BIM2-like [Vitis vinifera]
            gi|297738196|emb|CBI27397.3| unnamed protein product
            [Vitis vinifera]
          Length = 328

 Score =  292 bits (747), Expect = 2e-76
 Identities = 162/306 (52%), Positives = 200/306 (65%), Gaps = 5/306 (1%)
 Frame = -3

Query: 1351 ANMPRSKHSETEQRRRSKINERFQILRDLLPPSDQKRDKASFLLEVIEYVQFLHERLHKY 1172
            AN  RSKHS TEQRRRSKINERFQILRDL+P SDQKRD ASFLLEVIEYVQ+L E++ KY
Sbjct: 38   ANAMRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKY 97

Query: 1171 ETQHGG-NQEPTKLAPWRYSYWTGEGMVENSRLVKNGPGSGIMFPGKASENNVSIMPAI- 998
            E  + G   EPTKL PWR S+W  +  V + + + NG G G  F GK  ENN++I   + 
Sbjct: 98   EGSYQGLTPEPTKLMPWRNSHWRVQSFVGHPQAINNGSGPGSAFSGKFDENNINITSTML 157

Query: 997  --PPNPIEPDQSMGGIFKPVDQHGLPSREMPPPSPLQPNVYTPVSTSDGIVQPLQRPISD 824
                NP+E D S     K +D     ++ +  P  LQ N+  PV +  G+V PLQ P+SD
Sbjct: 158  VKAQNPVESDLSRDATCKAMDHQSEFNKAIVMPISLQSNMSAPVQSEGGLVHPLQGPVSD 217

Query: 823  DENMASQPPTQLCQNQPWTTDCP-TNETLNQQEEMTMEGGTINIASVYSQGLLNNLTQAL 647
             ++                 DCP T+ETL+++EE+ +EGGTI+I+S YSQGLLN LTQAL
Sbjct: 218  AQS----------------ADCPITSETLSKKEELMIEGGTISISSAYSQGLLNTLTQAL 261

Query: 646  QSSGVDLSQASISVQIDLGKRAIXXXXXXXXSAKDHGDPSPTNQAMRHSRNGSSGEDVDE 467
            QSSGVDLSQASISVQIDLGKRA          AKDH +P P+N  + H R+ SS ED D+
Sbjct: 262  QSSGVDLSQASISVQIDLGKRANRGLPSGTSIAKDHENPPPSNHIIAHHRDASSAEDSDQ 321

Query: 466  AQKRQK 449
            +QKR K
Sbjct: 322  SQKRLK 327


>ref|XP_002273274.2| PREDICTED: transcription factor BIM1-like [Vitis vinifera]
          Length = 565

 Score =  288 bits (737), Expect = 3e-75
 Identities = 164/304 (53%), Positives = 203/304 (66%), Gaps = 6/304 (1%)
 Frame = -3

Query: 1342 PRSKHSETEQRRRSKINERFQILRDLLPPSDQKRDKASFLLEVIEYVQFLHERLHKYE-T 1166
            PRSKHS TEQRRRSKIN+RFQ+LRDL+P SDQKRDKASFLLEVIEY+QFL E++HKYE +
Sbjct: 259  PRSKHSATEQRRRSKINDRFQMLRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGS 318

Query: 1165 QHGGNQEPTKLAPWRYSYWTGEGMVENSRLVKNGPGSGIMFPGKASENNVSIMPAI---P 995
              G N E  KL PWR S+   E   + SR + +G G  +MF  K  ENNV++ P I    
Sbjct: 319  FQGWNHESAKLMPWRNSHRPAESFADQSRGINSGSGPALMFSAKFDENNVAVSPNISRNT 378

Query: 994  PNPIEPDQSMGGIFKPVDQH-GLPSREMPPPSPLQPNVYTPVSTSDGIVQPLQRPISDDE 818
             NP+E D S    FK +D+H GL ++ +P    LQPN++TPV    G+ Q   R   D E
Sbjct: 379  QNPVESDLSASTTFKAMDRHPGLTNKAVPIHMQLQPNIFTPVVGGGGLAQLPPRLAPDAE 438

Query: 817  NMASQPPTQLCQNQ-PWTTDCPTNETLNQQEEMTMEGGTINIASVYSQGLLNNLTQALQS 641
            NMAS P +QL Q++   TT+C       +++E+T+EGGTI+I+S YSQGLLN LTQALQS
Sbjct: 439  NMASLPQSQLWQSRSSVTTECTVASDKLKEQELTIEGGTISISSAYSQGLLNTLTQALQS 498

Query: 640  SGVDLSQASISVQIDLGKRAIXXXXXXXXSAKDHGDPSPTNQAMRHSRNGSSGEDVDEAQ 461
            SGVDLS+ASISVQIDLG +A           KD+  PS +N A   SR  SSG D D+A 
Sbjct: 499  SGVDLSKASISVQIDLGNKANSRPTAPTPIIKDNQVPS-SNHATARSRVASSGGDSDQAL 557

Query: 460  KRQK 449
            KR K
Sbjct: 558  KRHK 561


>ref|XP_002278322.2| PREDICTED: transcription factor BIM2-like [Vitis vinifera]
          Length = 345

 Score =  284 bits (726), Expect = 5e-74
 Identities = 164/302 (54%), Positives = 206/302 (68%), Gaps = 7/302 (2%)
 Frame = -3

Query: 1339 RSKHSETEQRRRSKINERFQILRDLLPPSDQKRDKASFLLEVIEYVQFLHERLHKYETQH 1160
            RSKHS TEQRRRSKINERFQILRDL+P +DQKRDKASFLLEVIEY+QFL E+L+ YE  +
Sbjct: 49   RSKHSATEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLNMYEGSY 108

Query: 1159 GG-NQEPTKLAPWRYSYWTGEGMVENSRLVKNGPGSGIMFPGKASENNVSIMPAI---PP 992
             G +QEPTKL PWR +    E  +++S+++KNG G          ENNV++ PA      
Sbjct: 109  QGWSQEPTKLMPWR-NRGPVENFMDHSQVIKNGSGH---------ENNVAVTPATLVNAQ 158

Query: 991  NPIEPDQSMGGIFKPVDQH-GLPSREMPPPSPLQPNVYTPVSTSDGIVQPLQRPISDDEN 815
            NP+E D      +  +D   G  S+ +P   PLQ N++T V  SD   Q L   +SD EN
Sbjct: 159  NPVESDFGTAAAYNVMDNTPGPASQAVPLNMPLQTNMFTHVGRSDIPTQSLHGSVSDVEN 218

Query: 814  MASQPPTQLCQNQPWTTDC--PTNETLNQQEEMTMEGGTINIASVYSQGLLNNLTQALQS 641
            +ASQP       +P TTDC  P+N T+N+ EE+T+E GT++I+S YSQGLLN+LTQALQS
Sbjct: 219  IASQPLPHFSHGRPCTTDCAVPSN-TVNEPEELTIESGTVSISSAYSQGLLNSLTQALQS 277

Query: 640  SGVDLSQASISVQIDLGKRAIXXXXXXXXSAKDHGDPSPTNQAMRHSRNGSSGEDVDEAQ 461
            SGVDLSQASISVQID+GKRA         +AKD+ +PSP+N+ M HS   SS ED D+A 
Sbjct: 278  SGVDLSQASISVQIDIGKRANKGLNATTSNAKDYENPSPSNRTMAHSGFRSSSEDSDQAH 337

Query: 460  KR 455
            KR
Sbjct: 338  KR 339


>emb|CBI16924.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  284 bits (726), Expect = 5e-74
 Identities = 164/302 (54%), Positives = 206/302 (68%), Gaps = 7/302 (2%)
 Frame = -3

Query: 1339 RSKHSETEQRRRSKINERFQILRDLLPPSDQKRDKASFLLEVIEYVQFLHERLHKYETQH 1160
            RSKHS TEQRRRSKINERFQILRDL+P +DQKRDKASFLLEVIEY+QFL E+L+ YE  +
Sbjct: 106  RSKHSATEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLNMYEGSY 165

Query: 1159 GG-NQEPTKLAPWRYSYWTGEGMVENSRLVKNGPGSGIMFPGKASENNVSIMPAI---PP 992
             G +QEPTKL PWR +    E  +++S+++KNG G          ENNV++ PA      
Sbjct: 166  QGWSQEPTKLMPWR-NRGPVENFMDHSQVIKNGSGH---------ENNVAVTPATLVNAQ 215

Query: 991  NPIEPDQSMGGIFKPVDQH-GLPSREMPPPSPLQPNVYTPVSTSDGIVQPLQRPISDDEN 815
            NP+E D      +  +D   G  S+ +P   PLQ N++T V  SD   Q L   +SD EN
Sbjct: 216  NPVESDFGTAAAYNVMDNTPGPASQAVPLNMPLQTNMFTHVGRSDIPTQSLHGSVSDVEN 275

Query: 814  MASQPPTQLCQNQPWTTDC--PTNETLNQQEEMTMEGGTINIASVYSQGLLNNLTQALQS 641
            +ASQP       +P TTDC  P+N T+N+ EE+T+E GT++I+S YSQGLLN+LTQALQS
Sbjct: 276  IASQPLPHFSHGRPCTTDCAVPSN-TVNEPEELTIESGTVSISSAYSQGLLNSLTQALQS 334

Query: 640  SGVDLSQASISVQIDLGKRAIXXXXXXXXSAKDHGDPSPTNQAMRHSRNGSSGEDVDEAQ 461
            SGVDLSQASISVQID+GKRA         +AKD+ +PSP+N+ M HS   SS ED D+A 
Sbjct: 335  SGVDLSQASISVQIDIGKRANKGLNATTSNAKDYENPSPSNRTMAHSGFRSSSEDSDQAH 394

Query: 460  KR 455
            KR
Sbjct: 395  KR 396


>emb|CBI15359.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  283 bits (724), Expect = 9e-74
 Identities = 164/306 (53%), Positives = 202/306 (66%), Gaps = 8/306 (2%)
 Frame = -3

Query: 1342 PRSKHSETEQRRRSKINER--FQILRDLLPPSDQKRDKASFLLEVIEYVQFLHERLHKYE 1169
            PRSKHS TEQRRRSKIN+R  FQ+LRDL+P SDQKRDKASFLLEVIEY+QFL E++HKYE
Sbjct: 257  PRSKHSATEQRRRSKINDRRVFQMLRDLIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYE 316

Query: 1168 TQ-HGGNQEPTKLAPWRYSYWTGEGMVENSRLVKNGPGSGIMFPGKASENNVSIMPAIP- 995
                G N E  KL PWR S+   E   + SR + +G G  +MF  K  ENNV++ P I  
Sbjct: 317  GSFQGWNHESAKLMPWRNSHRPAESFADQSRGINSGSGPALMFSAKFDENNVAVSPNISR 376

Query: 994  --PNPIEPDQSMGGIFKPVDQH-GLPSREMPPPSPLQPNVYTPVSTSDGIVQPLQRPISD 824
               NP+E D S    FK +D+H GL ++ +P    LQPN++TPV    G+ Q   R   D
Sbjct: 377  NTQNPVESDLSASTTFKAMDRHPGLTNKAVPIHMQLQPNIFTPVVGGGGLAQLPPRLAPD 436

Query: 823  DENMASQPPTQLCQNQPW-TTDCPTNETLNQQEEMTMEGGTINIASVYSQGLLNNLTQAL 647
             ENMAS P +QL Q++   TT+C       +++E+T+EGGTI+I+S YSQGLLN LTQAL
Sbjct: 437  AENMASLPQSQLWQSRSSVTTECTVASDKLKEQELTIEGGTISISSAYSQGLLNTLTQAL 496

Query: 646  QSSGVDLSQASISVQIDLGKRAIXXXXXXXXSAKDHGDPSPTNQAMRHSRNGSSGEDVDE 467
            QSSGVDLS+ASISVQIDLG +A           KD+  PS +N A   SR  SSG D D+
Sbjct: 497  QSSGVDLSKASISVQIDLGNKANSRPTAPTPIIKDNQVPS-SNHATARSRVASSGGDSDQ 555

Query: 466  AQKRQK 449
            A KR K
Sbjct: 556  ALKRHK 561


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