BLASTX nr result

ID: Coptis23_contig00002430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002430
         (2523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275399.1| PREDICTED: microfibrillar-associated protein...   415   e-118
ref|XP_002319725.1| predicted protein [Populus trichocarpa] gi|2...   397   e-112
ref|XP_003524923.1| PREDICTED: microfibrillar-associated protein...   332   5e-92
ref|XP_003629615.1| Microfibrillar-associated protein [Medicago ...   332   8e-92
ref|XP_003531215.1| PREDICTED: microfibrillar-associated protein...   331   1e-91

>ref|XP_002275399.1| PREDICTED: microfibrillar-associated protein 1-like [Vitis vinifera]
          Length = 436

 Score =  415 bits (1066), Expect(2) = e-118
 Identities = 220/405 (54%), Positives = 251/405 (61%), Gaps = 2/405 (0%)
 Frame = +3

Query: 366  MSVTAGVSDTILSIRDKLRGRIQQTKVKRYWPGKAPDWADDVEEEGELRTSN--RVAVER 539
            MSVTAGVSDT+++IRDKLRG+I QTKVKRYWPGKAP+WADDV+E+  + T++   +A+E+
Sbjct: 1    MSVTAGVSDTVIAIRDKLRGKIGQTKVKRYWPGKAPEWADDVDEDAHIGTTSGASIALEK 60

Query: 540  VFXXXXXXXXXXXXXXXXXXXXXXXXXXXKDEVRADHRRIRQAEIVSTXXXXXXXXXXXX 719
             F                           +DEVRADHRRIRQAEIVST            
Sbjct: 61   AFPSREEDVGIVKKDDPRLRRLAESRIDNRDEVRADHRRIRQAEIVSTIEEENKRQEGLD 120

Query: 720  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXI 899
                                           P                           I
Sbjct: 121  LEEEDEDALEERRRRIRERLLRQQQEEAALLPEEEEDEAEEEEEEESEYETDSEEELTGI 180

Query: 900  AMVKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXIETRQIVVAEIRKDEQIQK 1079
            AMVKPVFVPKSERDT+                         +ET+QIVV +IR+DE+I K
Sbjct: 181  AMVKPVFVPKSERDTVADRERLEAEERALEESVKRRLEERKVETKQIVVEKIREDEEILK 240

Query: 1080 NLELDANNVVDVETDDELNEAEEYEAWKVREIARIKRDREDREAMIKEKEEIDKVRNMTE 1259
            NLE++AN   DV+TDDE+NE EEYEAWKVREIARIKRDRE REAM+KEKEE++KVRNMTE
Sbjct: 241  NLEVEAN-AADVDTDDEVNEVEEYEAWKVREIARIKRDREAREAMLKEKEEVEKVRNMTE 299

Query: 1260 EERREWERKNPKPLSQPKQKWRFMQKYFHKGAFFQSXXXXXXXXXXXXNIYTRDYSAPTG 1439
            EERREWERKNPKP S PKQKWRFMQKY+HKGAFFQS             IY RD+SAPTG
Sbjct: 300  EERREWERKNPKPASAPKQKWRFMQKYYHKGAFFQSEVDDVAATAGSDGIYARDFSAPTG 359

Query: 1440 EDKLNKTILPKVMQVKHFGRSGRTKWSHLVNEDTTDWNTPWTYND 1574
            EDK+NKTILPKVMQVKHFGRSGRTKW+HLVNEDTTDWN PWTYND
Sbjct: 360  EDKMNKTILPKVMQVKHFGRSGRTKWTHLVNEDTTDWNNPWTYND 404



 Score = 38.5 bits (88), Expect(2) = e-118
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +2

Query: 1577 LRAKYNAKMAGMNAPIEKP 1633
            LRAKYNAKMAGMN PI KP
Sbjct: 406  LRAKYNAKMAGMNVPIAKP 424


>ref|XP_002319725.1| predicted protein [Populus trichocarpa] gi|222858101|gb|EEE95648.1|
            predicted protein [Populus trichocarpa]
          Length = 435

 Score =  397 bits (1020), Expect(2) = e-112
 Identities = 209/404 (51%), Positives = 248/404 (61%), Gaps = 1/404 (0%)
 Frame = +3

Query: 366  MSVTAGVSDTILSIRDKLRGRIQQTKVKRYWPGKAPDWADDVEEEGELRTSNRVAVERVF 545
            MSVTAGVSDT L++RDKLRG+I QTKVKRYWPGKAP+WADD +E+G++R +   A+++ F
Sbjct: 1    MSVTAGVSDTALAVRDKLRGKIGQTKVKRYWPGKAPEWADDADEDGDIRMARAAALDKAF 60

Query: 546  XXXXXXXXXXXXXXXXXXXXXXXXXXX-KDEVRADHRRIRQAEIVSTXXXXXXXXXXXXX 722
                                        +DEVRADHRRIRQAEI+ST             
Sbjct: 61   PIRDDSYDVAASKDDPRLRRLAESRIDNRDEVRADHRRIRQAEIISTEEEEMRRQEWADM 120

Query: 723  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXIA 902
                                          P                           +A
Sbjct: 121  EEEDEDALEERRRRIKEKLRHREQEEAVLLPIEEEEEVEEEEEEESEYETDSEEEMTGMA 180

Query: 903  MVKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXIETRQIVVAEIRKDEQIQKN 1082
            MVKPVFVPKSERDTI                         +ET+QI+V EI+K+E IQKN
Sbjct: 181  MVKPVFVPKSERDTIAERERLEAEEQALEEKVRRKLEQRKVETKQILVEEIQKEELIQKN 240

Query: 1083 LELDANNVVDVETDDELNEAEEYEAWKVREIARIKRDREDREAMIKEKEEIDKVRNMTEE 1262
            LE +AN + DV+TDDE+NEAEEYEAWKVREIARIKRDRE REAM+KE+EEI++VRNMTEE
Sbjct: 241  LETEAN-IADVDTDDEINEAEEYEAWKVREIARIKRDREAREAMLKEREEIERVRNMTEE 299

Query: 1263 ERREWERKNPKPLSQPKQKWRFMQKYFHKGAFFQSXXXXXXXXXXXXNIYTRDYSAPTGE 1442
            ERREWERKNPKP    KQKWRFMQKY+HKGAFFQ             +I+ RD+S+PTGE
Sbjct: 300  ERREWERKNPKPAPPSKQKWRFMQKYYHKGAFFQDQPDDRAATAGTDDIFRRDFSSPTGE 359

Query: 1443 DKLNKTILPKVMQVKHFGRSGRTKWSHLVNEDTTDWNTPWTYND 1574
            D+++K+ILPKVMQVKHFGRSGRTKW+HLVNEDTTDWN PWT+ND
Sbjct: 360  DRMDKSILPKVMQVKHFGRSGRTKWTHLVNEDTTDWNNPWTFND 403



 Score = 36.2 bits (82), Expect(2) = e-112
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +2

Query: 1577 LRAKYNAKMAGMNAPIEKP 1633
            LRAKYNAKMAGM+A I+KP
Sbjct: 405  LRAKYNAKMAGMSAAIDKP 423


>ref|XP_003524923.1| PREDICTED: microfibrillar-associated protein 1-like [Glycine max]
          Length = 436

 Score =  332 bits (851), Expect(2) = 5e-92
 Identities = 161/226 (71%), Positives = 179/226 (79%)
 Frame = +3

Query: 897  IAMVKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXIETRQIVVAEIRKDEQIQ 1076
            +AMVKPVFVPKSERDTI                         IET+QIVV EIRKDE+IQ
Sbjct: 180  VAMVKPVFVPKSERDTIAERERLEAEELALEDKRKRRLEERRIETKQIVVEEIRKDEEIQ 239

Query: 1077 KNLELDANNVVDVETDDELNEAEEYEAWKVREIARIKRDREDREAMIKEKEEIDKVRNMT 1256
            KNLE++AN + DV+TDDE+NEAEEYEAWKVREI RIKRDREDREAM+KEKEEI+KVRNMT
Sbjct: 240  KNLEMEAN-IADVDTDDEVNEAEEYEAWKVREIGRIKRDREDREAMLKEKEEIEKVRNMT 298

Query: 1257 EEERREWERKNPKPLSQPKQKWRFMQKYFHKGAFFQSXXXXXXXXXXXXNIYTRDYSAPT 1436
            EEERREWER+NPKP   PKQKWRFMQKY+HKGAFFQ+             I+ RD+SAPT
Sbjct: 299  EEERREWERRNPKPAPPPKQKWRFMQKYYHKGAFFQNESDDRAATVGSDGIFARDFSAPT 358

Query: 1437 GEDKLNKTILPKVMQVKHFGRSGRTKWSHLVNEDTTDWNTPWTYND 1574
            GEDK++KTILPKVMQVKHFGRSGRTKW+HLVNEDTTDWN PWTYND
Sbjct: 359  GEDKMDKTILPKVMQVKHFGRSGRTKWTHLVNEDTTDWNNPWTYND 404



 Score = 35.0 bits (79), Expect(2) = 5e-92
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 1577 LRAKYNAKMAGMNAPIEKP 1633
            LRAKYN KMA MNAPI KP
Sbjct: 406  LRAKYNDKMAAMNAPIVKP 424



 Score =  109 bits (272), Expect = 4e-21
 Identities = 56/109 (51%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
 Frame = +3

Query: 366 MSVTAGVSDTILSIRDKLRGRIQQTKVKRYWPGKAPDWADDVEEE---GELRTSNRVAVE 536
           MSVTAGVSDT++++RDKLRG+I QTKVKRYWPGK P+WADD  E+    ++R S   A+E
Sbjct: 1   MSVTAGVSDTVIAVRDKLRGKIGQTKVKRYWPGKVPEWADDENEDAAPADIRPSREAALE 60

Query: 537 RVFXXXXXXXXXXXXXXXXXXXXXXXXXXXKDEVRADHRRIRQAEIVST 683
           + F                           ++EVRADHRRIRQAEIVST
Sbjct: 61  KAFPRHQEDTAIVRKDDRRLRRLAQSRIDNREEVRADHRRIRQAEIVST 109


>ref|XP_003629615.1| Microfibrillar-associated protein [Medicago truncatula]
            gi|355523637|gb|AET04091.1| Microfibrillar-associated
            protein [Medicago truncatula]
          Length = 436

 Score =  332 bits (850), Expect(2) = 8e-92
 Identities = 162/226 (71%), Positives = 179/226 (79%)
 Frame = +3

Query: 897  IAMVKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXIETRQIVVAEIRKDEQIQ 1076
            +AMVKPVFVPKSERDTI                          ETRQIVV EIRKD++IQ
Sbjct: 180  VAMVKPVFVPKSERDTIAERERLEAEEEALEEARKRRMEERRNETRQIVVEEIRKDQEIQ 239

Query: 1077 KNLELDANNVVDVETDDELNEAEEYEAWKVREIARIKRDREDREAMIKEKEEIDKVRNMT 1256
            KN+EL+AN + DV+TDDELNEAEEYEAWKVREI RIKRDREDREA++KEKEE+++VRNMT
Sbjct: 240  KNIELEAN-IDDVDTDDELNEAEEYEAWKVREIGRIKRDREDREALLKEKEEVERVRNMT 298

Query: 1257 EEERREWERKNPKPLSQPKQKWRFMQKYFHKGAFFQSXXXXXXXXXXXXNIYTRDYSAPT 1436
            EEERREWERKNPKP    KQKWRFMQKY+HKGAFFQS            NI+TRD+SAPT
Sbjct: 299  EEERREWERKNPKPSQSSKQKWRFMQKYYHKGAFFQSNSDDRAATVGTDNIFTRDFSAPT 358

Query: 1437 GEDKLNKTILPKVMQVKHFGRSGRTKWSHLVNEDTTDWNTPWTYND 1574
            GEDK++KTILPKVMQVKHFGRSGRTKWSHLVNEDTTDWN PWTYND
Sbjct: 359  GEDKMDKTILPKVMQVKHFGRSGRTKWSHLVNEDTTDWNNPWTYND 404



 Score = 34.7 bits (78), Expect(2) = 8e-92
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +2

Query: 1577 LRAKYNAKMAGMNAPIEKP 1633
            LRAKYN +MA MNAPI KP
Sbjct: 406  LRAKYNERMAAMNAPIAKP 424



 Score =  105 bits (262), Expect = 6e-20
 Identities = 54/108 (50%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = +3

Query: 366 MSVTAGVSDTILSIRDKLRGRIQQTKVKRYWPGKAPDWAD-DVEE-EGELRTSNRVAVER 539
           MSVTAGVSDT++++RDKLRG+I QTKV RYWPGKAP+WAD ++E+  G++R+   VA+++
Sbjct: 1   MSVTAGVSDTVIAVRDKLRGKIGQTKVNRYWPGKAPEWADKEIEDASGDIRSDREVALDK 60

Query: 540 VFXXXXXXXXXXXXXXXXXXXXXXXXXXXKDEVRADHRRIRQAEIVST 683
            F                           ++EVR DHRRIRQAEIVST
Sbjct: 61  AFPRHEEDTAIVRKDDRRLRRLIESRVDNREEVREDHRRIRQAEIVST 108


>ref|XP_003531215.1| PREDICTED: microfibrillar-associated protein 1-like [Glycine max]
          Length = 440

 Score =  331 bits (848), Expect(2) = 1e-91
 Identities = 160/226 (70%), Positives = 179/226 (79%)
 Frame = +3

Query: 897  IAMVKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXIETRQIVVAEIRKDEQIQ 1076
            +AMVKPVFVPKSERDTI                         IET+QIVV EIRKDE+IQ
Sbjct: 181  VAMVKPVFVPKSERDTIAERERLEAEELAFEEKRKRRLEERRIETKQIVVEEIRKDEEIQ 240

Query: 1077 KNLELDANNVVDVETDDELNEAEEYEAWKVREIARIKRDREDREAMIKEKEEIDKVRNMT 1256
            KNLE++AN + DV+TDDE+NEA+EYEAWKVREI RIKRDREDREAM+KEKEEI+KVRNMT
Sbjct: 241  KNLEMEAN-IADVDTDDEVNEADEYEAWKVREIGRIKRDREDREAMLKEKEEIEKVRNMT 299

Query: 1257 EEERREWERKNPKPLSQPKQKWRFMQKYFHKGAFFQSXXXXXXXXXXXXNIYTRDYSAPT 1436
            EEERREWER+NPKP   PKQKWRFMQKY+HKGAFFQ+             I+ RD+SAPT
Sbjct: 300  EEERREWERRNPKPAPPPKQKWRFMQKYYHKGAFFQNESDDRAATVGSDGIFARDFSAPT 359

Query: 1437 GEDKLNKTILPKVMQVKHFGRSGRTKWSHLVNEDTTDWNTPWTYND 1574
            GEDK++KTILPKVMQVKHFGRSGRTKW+HLVNEDTTDWN PWTYND
Sbjct: 360  GEDKMDKTILPKVMQVKHFGRSGRTKWTHLVNEDTTDWNNPWTYND 405



 Score = 35.0 bits (79), Expect(2) = 1e-91
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 1577 LRAKYNAKMAGMNAPIEKP 1633
            LRAKYN KMA MNAPI KP
Sbjct: 407  LRAKYNDKMAAMNAPIVKP 425



 Score =  110 bits (275), Expect = 2e-21
 Identities = 58/110 (52%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
 Frame = +3

Query: 366 MSVTAGVSDTILSIRDKLRGRIQQTKVKRYWPGKAPDWADDVEEE----GELRTSNRVAV 533
           MSVTAGVSDT+++IRDKLRG+I QTKVKRYWPGK P+WADD  EE     ++R S   A+
Sbjct: 1   MSVTAGVSDTVIAIRDKLRGKIGQTKVKRYWPGKVPEWADDENEEDAAPADIRPSREAAL 60

Query: 534 ERVFXXXXXXXXXXXXXXXXXXXXXXXXXXXKDEVRADHRRIRQAEIVST 683
           E+ F                           ++EVRADHRRIRQAEIVST
Sbjct: 61  EKAFPRHEEDAAIVRKDDRRLRRLAESRIDNREEVRADHRRIRQAEIVST 110


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