BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002421
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|2...   511   e-143
ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putativ...   507   e-141
emb|CBI14965.3| unnamed protein product [Vitis vinifera]              505   e-141
ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   505   e-141
ref|XP_002322195.1| predicted protein [Populus trichocarpa] gi|2...   501   e-140

>ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|222859338|gb|EEE96885.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  511 bits (1317), Expect = e-143
 Identities = 253/282 (89%), Positives = 267/282 (94%)
 Frame = -1

Query: 847 AQGWPMALKGRDLVGIAETGSGKTLSYLLPALVHVMAQPRLVQGEGPVVLVLAPTRELAV 668
           AQGWPMALKGRDL+GIAETGSGKTL+Y+LPA VHV AQPRLVQG+GP+VLVLAPTRELAV
Sbjct: 148 AQGWPMALKGRDLIGIAETGSGKTLAYMLPAFVHVAAQPRLVQGDGPIVLVLAPTRELAV 207

Query: 667 QIQEEASKFGSRSNIRSTCVYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEANHTNLRR 488
           QIQEE  KFGS +NIRSTC+YGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEA HTNLRR
Sbjct: 208 QIQEEGLKFGSPANIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLRR 267

Query: 487 VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEVEALARQFLHNPYKVI 308
           VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWP+EVE LARQFLHN YKVI
Sbjct: 268 VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVEILARQFLHNAYKVI 327

Query: 307 IGSSDLKANPSINQVIEVVTDGEKYNRLIKLLNEQMDGSRILIFVETKKGCDHVTRQLRL 128
           IGS+DLKAN SINQV+EV+ D EKYNRLIKLL E MDGSRILIF+ETKKGCD VTRQLR+
Sbjct: 328 IGSADLKANQSINQVVEVIMDMEKYNRLIKLLKEVMDGSRILIFMETKKGCDQVTRQLRM 387

Query: 127 DGWPALSIHGDKDQAERDWVLAEFKSGRSLIMTATDVAARGL 2
           DGWPALSIHGDK+QAERDWVLAEFKSGRS IMTATDVAARGL
Sbjct: 388 DGWPALSIHGDKNQAERDWVLAEFKSGRSAIMTATDVAARGL 429


>ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547784|gb|EEF49276.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 540

 Score =  507 bits (1305), Expect = e-141
 Identities = 247/282 (87%), Positives = 268/282 (95%)
 Frame = -1

Query: 847  AQGWPMALKGRDLVGIAETGSGKTLSYLLPALVHVMAQPRLVQGEGPVVLVLAPTRELAV 668
            AQGWPMALKGRD++GIAETGSGKTL+Y+LPALVHV AQPRLVQGEGPVVL+LAPTRELAV
Sbjct: 253  AQGWPMALKGRDVIGIAETGSGKTLAYVLPALVHVSAQPRLVQGEGPVVLILAPTRELAV 312

Query: 667  QIQEEASKFGSRSNIRSTCVYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEANHTNLRR 488
            QIQEEA KFGSR+NIR+TC+YGGAPKGPQIRDL RGVEIVIATPGRLIDMLEA HTNLRR
Sbjct: 313  QIQEEALKFGSRANIRTTCIYGGAPKGPQIRDLHRGVEIVIATPGRLIDMLEAQHTNLRR 372

Query: 487  VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEVEALARQFLHNPYKVI 308
            VTYLVLDEADRMLDMGFEPQIRK++SQIRPDRQTLYWSATWP+EVE LARQFL NPYKV+
Sbjct: 373  VTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLYWSATWPREVETLARQFLRNPYKVV 432

Query: 307  IGSSDLKANPSINQVIEVVTDGEKYNRLIKLLNEQMDGSRILIFVETKKGCDHVTRQLRL 128
            IGS+DLKAN SINQV+E+V++ EKYNRLIKLL E MDGSRILIF+ETKKGCD VTRQLR+
Sbjct: 433  IGSTDLKANQSINQVVEIVSEMEKYNRLIKLLKEVMDGSRILIFMETKKGCDQVTRQLRM 492

Query: 127  DGWPALSIHGDKDQAERDWVLAEFKSGRSLIMTATDVAARGL 2
            DGWP LSIHGDK+Q ERDWVL+EFKSGRS IMTATDVAARGL
Sbjct: 493  DGWPVLSIHGDKNQTERDWVLSEFKSGRSPIMTATDVAARGL 534


>emb|CBI14965.3| unnamed protein product [Vitis vinifera]
          Length = 611

 Score =  505 bits (1300), Expect = e-141
 Identities = 251/282 (89%), Positives = 266/282 (94%)
 Frame = -1

Query: 847  AQGWPMALKGRDLVGIAETGSGKTLSYLLPALVHVMAQPRLVQGEGPVVLVLAPTRELAV 668
            AQGWPMALKGRDL+GIAETGSGKTL+YLLPALVHV AQP LV+GEGP+VLVLAPTRELAV
Sbjct: 324  AQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVRGEGPIVLVLAPTRELAV 383

Query: 667  QIQEEASKFGSRSNIRSTCVYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEANHTNLRR 488
            QIQEEA KFGS + IRSTC+YGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEA HTNLRR
Sbjct: 384  QIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLRR 443

Query: 487  VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEVEALARQFLHNPYKVI 308
            VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWP+EVE LARQFL NPYKVI
Sbjct: 444  VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVETLARQFLRNPYKVI 503

Query: 307  IGSSDLKANPSINQVIEVVTDGEKYNRLIKLLNEQMDGSRILIFVETKKGCDHVTRQLRL 128
            IGS DLKAN SI QV+EVVT+ EKYNRLI+LL E MDGSRILIF+ETKKGCD VTRQ+R+
Sbjct: 504  IGSQDLKANQSIQQVVEVVTETEKYNRLIRLLKEVMDGSRILIFMETKKGCDQVTRQMRM 563

Query: 127  DGWPALSIHGDKDQAERDWVLAEFKSGRSLIMTATDVAARGL 2
            DGWP+LSIHGDK+QAERDWVLAEFKSGRS IMTATDVAARGL
Sbjct: 564  DGWPSLSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 605


>ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
            vinifera]
          Length = 611

 Score =  505 bits (1300), Expect = e-141
 Identities = 251/282 (89%), Positives = 266/282 (94%)
 Frame = -1

Query: 847  AQGWPMALKGRDLVGIAETGSGKTLSYLLPALVHVMAQPRLVQGEGPVVLVLAPTRELAV 668
            AQGWPMALKGRDL+GIAETGSGKTL+YLLPALVHV AQP LV+GEGP+VLVLAPTRELAV
Sbjct: 217  AQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVRGEGPIVLVLAPTRELAV 276

Query: 667  QIQEEASKFGSRSNIRSTCVYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEANHTNLRR 488
            QIQEEA KFGS + IRSTC+YGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEA HTNLRR
Sbjct: 277  QIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLRR 336

Query: 487  VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEVEALARQFLHNPYKVI 308
            VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWP+EVE LARQFL NPYKVI
Sbjct: 337  VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVETLARQFLRNPYKVI 396

Query: 307  IGSSDLKANPSINQVIEVVTDGEKYNRLIKLLNEQMDGSRILIFVETKKGCDHVTRQLRL 128
            IGS DLKAN SI QV+EVVT+ EKYNRLI+LL E MDGSRILIF+ETKKGCD VTRQ+R+
Sbjct: 397  IGSQDLKANQSIQQVVEVVTETEKYNRLIRLLKEVMDGSRILIFMETKKGCDQVTRQMRM 456

Query: 127  DGWPALSIHGDKDQAERDWVLAEFKSGRSLIMTATDVAARGL 2
            DGWP+LSIHGDK+QAERDWVLAEFKSGRS IMTATDVAARGL
Sbjct: 457  DGWPSLSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 498


>ref|XP_002322195.1| predicted protein [Populus trichocarpa] gi|222869191|gb|EEF06322.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  501 bits (1291), Expect = e-140
 Identities = 249/282 (88%), Positives = 263/282 (93%)
 Frame = -1

Query: 847 AQGWPMALKGRDLVGIAETGSGKTLSYLLPALVHVMAQPRLVQGEGPVVLVLAPTRELAV 668
           AQGWPMALKGRDL+GIAETGSGKTL+YLLPA VHV AQPRLV G+GP+VLVLAPTRELAV
Sbjct: 96  AQGWPMALKGRDLIGIAETGSGKTLAYLLPAFVHVAAQPRLVHGDGPIVLVLAPTRELAV 155

Query: 667 QIQEEASKFGSRSNIRSTCVYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEANHTNLRR 488
           QIQEEA KFGS++NIRSTC+YGGAPKGPQIRDLQRGVEIVIATPGRLIDML A H NLRR
Sbjct: 156 QIQEEALKFGSKANIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLGAQHVNLRR 215

Query: 487 VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEVEALARQFLHNPYKVI 308
           VTYLVLDEADRMLDMGFEPQIRKI+SQIRPDRQTLYWSATWP+EVEALAR FLHNPYKVI
Sbjct: 216 VTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPREVEALARHFLHNPYKVI 275

Query: 307 IGSSDLKANPSINQVIEVVTDGEKYNRLIKLLNEQMDGSRILIFVETKKGCDHVTRQLRL 128
           IGS DLKAN SI QV+EV+ D EKY RLIKLL E MDGSRILIF+ETKKGCD VTRQLR+
Sbjct: 276 IGSQDLKANQSIKQVVEVMMDLEKYKRLIKLLKEVMDGSRILIFMETKKGCDQVTRQLRM 335

Query: 127 DGWPALSIHGDKDQAERDWVLAEFKSGRSLIMTATDVAARGL 2
           DGW ALSIHGDK+QAERDWVLAEFKSGRS IMTATDVAARGL
Sbjct: 336 DGWAALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 377