BLASTX nr result
ID: Coptis23_contig00002419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00002419 (214 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530251.1| conserved hypothetical protein [Ricinus comm... 60 1e-07 ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247... 57 2e-06 emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera] 57 2e-06 >ref|XP_002530251.1| conserved hypothetical protein [Ricinus communis] gi|223530217|gb|EEF32121.1| conserved hypothetical protein [Ricinus communis] Length = 809 Score = 60.5 bits (145), Expect = 1e-07 Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%) Frame = +1 Query: 64 FSQAVDDPAIIHLRKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEVSLL 213 F+ + PAI+ L KW ++ L+LS+F EAFISPTRELLLLLSHQCE LL Sbjct: 4 FNGGGESPAILQLYKWGPSQCQLNLSEFREAFISPTRELLLLLSHQCEALLL 55 >ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1| predicted protein [Populus trichocarpa] Length = 814 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 2/47 (4%) Frame = +1 Query: 79 DDPAIIHLRKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEVSLL 213 + PAI+ L KW +K +DLS+F E FISPTRELLLLLS+QCE LL Sbjct: 8 ESPAILQLHKWGPSKFNIDLSEFREGFISPTRELLLLLSYQCEALLL 54 >ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1| predicted protein [Populus trichocarpa] Length = 920 Score = 57.4 bits (137), Expect = 1e-06 Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 2/47 (4%) Frame = +1 Query: 79 DDPAIIHLRKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEVSLL 213 + PA++ L KW ++ +DLS+F E FISPTRELLLLLS+QCE LL Sbjct: 8 ESPAVLQLHKWGPSQFNIDLSEFREGFISPTRELLLLLSYQCEALLL 54 >ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247348 [Vitis vinifera] Length = 3288 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 2/52 (3%) Frame = +1 Query: 64 FSQAVDDPAIIHLRKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEVSLL 213 +S + + PA++ L +W ++ L+LS+F EAFISPTRELLLLLS+QCE LL Sbjct: 3 YSCSGEGPAMLQLHRWSPSQFQLNLSEFREAFISPTRELLLLLSYQCEALLL 54 >emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera] Length = 995 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 2/52 (3%) Frame = +1 Query: 64 FSQAVDDPAIIHLRKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEVSLL 213 +S + + PA++ L +W ++ L+LS+F EAFISPTRELLLLLS+QCE LL Sbjct: 3 YSCSGEGPAMLQLHRWSPSQFQLNLSEFREAFISPTRELLLLLSYQCEALLL 54