BLASTX nr result

ID: Coptis23_contig00002406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002406
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-22
ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-21
ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811...    97   9e-18
ref|XP_002530251.1| conserved hypothetical protein [Ricinus comm...    96   3e-17
emb|CBI21533.3| unnamed protein product [Vitis vinifera]               92   4e-16

>ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score =  112 bits (280), Expect = 3e-22
 Identities = 68/161 (42%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
 Frame = -2

Query: 433 DGPAIIQLWKWDSTK--LDLSKFCEAFISPTREXXXXXLHQCETSLLPLTG--------- 287
           + PA++QL KW  ++  +DLS+F E FISPTRE      +QCE  LLPL           
Sbjct: 8   ESPAVLQLHKWGPSQFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAGESVSNRVS 67

Query: 286 ---TDDLGRCYDSNSFSSSK*TTLRRLNSLDNTPSNSGSVEDVP---SLESSSPRSEDCS 125
               D+  +C  S +FSS   T   R +  D+ P  S SV+D     SLE    RS +  
Sbjct: 68  EPLNDERLQCRSSAAFSSESWTEPSRSDLKDDIPYTSASVKDFDNGFSLEHEFSRSNNSR 127

Query: 124 LISYVKSLVWCHYGDAYDQHKDVSFREFLFVSGDRGITVHA 2
            +  V SL W   GD Y+QHK+ SFREFLFVS   G+TVHA
Sbjct: 128 FVCDVNSLAWGVCGDTYNQHKEASFREFLFVSSSNGVTVHA 168


>ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score =  109 bits (272), Expect = 2e-21
 Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
 Frame = -2

Query: 433 DGPAIIQLWKWDSTK--LDLSKFCEAFISPTREXXXXXLHQCETSLLPLTGTDDLGRCYD 260
           + PAI+QL KW  +K  +DLS+F E FISPTRE      +QCE  LLPL   + +  C  
Sbjct: 8   ESPAILQLHKWGPSKFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAGESVNNCVS 67

Query: 259 S-------NSFSSSK*TTLRRLNSLDNTPSNSGSVEDVP---SLESSSPRSEDCSLISYV 110
                      SS   T   R +  D+ P +S SV D     SLE+   RS +   +  V
Sbjct: 68  EPVGDERLQCRSSELCTESSRSDLKDDIPCSSASVGDFDNGFSLENGFLRSNNYGFVHDV 127

Query: 109 KSLVWCHYGDAYDQHKDVSFREFLFVSGDRGITVHA 2
            SL W   GD Y+QHK+ SFREFLFVS   G+TVHA
Sbjct: 128 NSLAWGVCGDTYNQHKEASFREFLFVSSSDGVTVHA 163


>ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811665 [Glycine max]
          Length = 3260

 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 65/159 (40%), Positives = 87/159 (54%), Gaps = 15/159 (9%)
 Frame = -2

Query: 433 DGPAIIQLWKWD--STKLDLSKFCEAFISPTREXXXXXLHQCETSLLPLT------GTDD 278
           + PAI+QL  WD   T++ LS F EAF+SPTRE      ++ E  LLPL+      G  +
Sbjct: 51  EDPAILQLHNWDLSETRIGLSDFREAFLSPTREILLLHSYEREALLLPLSKGVLHSGGAE 110

Query: 277 LGRCYDSNSFSS---SK*TTLRRLNSL--DNTPSNSGSVEDVPS--LESSSPRSEDCSLI 119
            G  Y++++  S   S   + R   S+  +++P  SGS  D+ +        +S  C  I
Sbjct: 111 GGYDYENHNPGSADVSPEASTRPSESVLVNDSPCTSGSDTDIDTDLAGIKCSKSNSCPYI 170

Query: 118 SYVKSLVWCHYGDAYDQHKDVSFREFLFVSGDRGITVHA 2
           S V SL W H  D YDQH D SFRE LFVSG  G+TVHA
Sbjct: 171 SDVNSLAWAHCEDGYDQHNDASFREVLFVSGRCGVTVHA 209


>ref|XP_002530251.1| conserved hypothetical protein [Ricinus communis]
           gi|223530217|gb|EEF32121.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
 Frame = -2

Query: 433 DGPAIIQLWKWDSTK--LDLSKFCEAFISPTREXXXXXLHQCETSLLPLT---GTDD--L 275
           + PAI+QL+KW  ++  L+LS+F EAFISPTRE      HQCE  LLPL     TDD  L
Sbjct: 9   ESPAILQLYKWGPSQCQLNLSEFREAFISPTRELLLLLSHQCEALLLPLVTGDATDDNIL 68

Query: 274 GRCYDSNSFSSSK*TTLRRLNS----------LDNTPSNSGSVEDVPSLESSSPRSEDCS 125
              ++ +  S S   +  +L++          +  T +++   E+  S E     S    
Sbjct: 69  ETVHNDHLQSQSSAASSSQLSTHPSWSDTKENISPTDASATDCENGFSAEDQISTSNSYP 128

Query: 124 LISYVKSLVWCHYGDAYDQHKDVSFREFLFVSGDRGITVHA 2
            I  V SL W   GD Y+ H DV+FRE LFVS D G+TVHA
Sbjct: 129 FICDVNSLAWGVCGDMYNPHDDVTFRELLFVSNDFGVTVHA 169


>emb|CBI21533.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 15/155 (9%)
 Frame = -2

Query: 421 IIQLWKWDSTK--LDLSKFCEAFISPTREXXXXXLHQCETSLLPLTGTDDLGRC------ 266
           ++QL +W  ++  L+LS+F EAFISPTRE      +QCE  LLPL   + +         
Sbjct: 1   MLQLHRWSPSQFQLNLSEFREAFISPTRELLLLLSYQCEALLLPLITGNSINSDHPETFN 60

Query: 265 YDS--NSFSSSK*TTL-RRLNSLDNTPSNSGSVEDVPS----LESSSPRSEDCSLISYVK 107
           Y+S  N +SS+   ++  R +S +N P  SGSV  V       E++  +      +  V 
Sbjct: 61  YESLQNPYSSAFSASVPSRSDSRENMPCTSGSVTVVSDNDFLCENNLSKCSGYPFVCDVN 120

Query: 106 SLVWCHYGDAYDQHKDVSFREFLFVSGDRGITVHA 2
           SL W   GD Y+QHKD  FRE LFVSG+ G+TVHA
Sbjct: 121 SLAWGVCGDNYNQHKDTFFRELLFVSGNHGVTVHA 155


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