BLASTX nr result
ID: Coptis23_contig00002405
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00002405 (228 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2... 65 8e-09 ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811... 57 1e-06 ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247... 55 5e-06 emb|CBI21533.3| unnamed protein product [Vitis vinifera] 55 5e-06 >ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1| predicted protein [Populus trichocarpa] Length = 920 Score = 64.7 bits (156), Expect = 8e-09 Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Frame = -1 Query: 225 SFSSSK*TTLRWLSSLDNIPSTSGSVEDVP---SLESTSPRYEDCSLISDVKSLAWGHYG 55 +FSS T D+IP TS SV+D SLE R + + DV SLAWG G Sbjct: 82 AFSSESWTEPSRSDLKDDIPYTSASVKDFDNGFSLEHEFSRSNNSRFVCDVNSLAWGVCG 141 Query: 54 DAYDQHKDVSFREFLFVS 1 D Y+QHK+ SFREFLFVS Sbjct: 142 DTYNQHKEASFREFLFVS 159 >ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1| predicted protein [Populus trichocarpa] Length = 814 Score = 61.2 bits (147), Expect = 8e-08 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 3/62 (4%) Frame = -1 Query: 177 DNIPSTSGSVEDVP---SLESTSPRYEDCSLISDVKSLAWGHYGDAYDQHKDVSFREFLF 7 D+IP +S SV D SLE+ R + + DV SLAWG GD Y+QHK+ SFREFLF Sbjct: 93 DDIPCSSASVGDFDNGFSLENGFLRSNNYGFVHDVNSLAWGVCGDTYNQHKEASFREFLF 152 Query: 6 VS 1 VS Sbjct: 153 VS 154 >ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811665 [Glycine max] Length = 3260 Score = 57.4 bits (137), Expect = 1e-06 Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Frame = -1 Query: 180 LDNIPSTSGSVEDVPS--LESTSPRYEDCSLISDVKSLAWGHYGDAYDQHKDVSFREFLF 7 +++ P TSGS D+ + + C ISDV SLAW H D YDQH D SFRE LF Sbjct: 139 VNDSPCTSGSDTDIDTDLAGIKCSKSNSCPYISDVNSLAWAHCEDGYDQHNDASFREVLF 198 Query: 6 VS 1 VS Sbjct: 199 VS 200 >ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247348 [Vitis vinifera] Length = 3288 Score = 55.5 bits (132), Expect = 5e-06 Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Frame = -1 Query: 183 SLDNIPSTSGSVEDVPS----LESTSPRYEDCSLISDVKSLAWGHYGDAYDQHKDVSFRE 16 S +N+P TSGSV V E+ + + DV SLAWG GD Y+QHKD FRE Sbjct: 122 SRENMPCTSGSVTVVSDNDFLCENNLSKCSGYPFVCDVNSLAWGVCGDNYNQHKDTFFRE 181 Query: 15 FLFVS 1 LFVS Sbjct: 182 LLFVS 186 >emb|CBI21533.3| unnamed protein product [Vitis vinifera] Length = 668 Score = 55.5 bits (132), Expect = 5e-06 Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Frame = -1 Query: 183 SLDNIPSTSGSVEDVPS----LESTSPRYEDCSLISDVKSLAWGHYGDAYDQHKDVSFRE 16 S +N+P TSGSV V E+ + + DV SLAWG GD Y+QHKD FRE Sbjct: 82 SRENMPCTSGSVTVVSDNDFLCENNLSKCSGYPFVCDVNSLAWGVCGDNYNQHKDTFFRE 141 Query: 15 FLFVS 1 LFVS Sbjct: 142 LLFVS 146