BLASTX nr result

ID: Coptis23_contig00002396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002396
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277493.2| PREDICTED: uncharacterized protein LOC100249...   266   6e-69
ref|XP_004142857.1| PREDICTED: uncharacterized protein LOC101219...   235   1e-59
ref|XP_004162301.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   234   1e-59
ref|XP_002326145.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59
ref|XP_002516212.1| conserved hypothetical protein [Ricinus comm...   224   1e-56

>ref|XP_002277493.2| PREDICTED: uncharacterized protein LOC100249222 [Vitis vinifera]
          Length = 1747

 Score =  266 bits (679), Expect = 6e-69
 Identities = 137/194 (70%), Positives = 154/194 (79%), Gaps = 5/194 (2%)
 Frame = -2

Query: 572 GPFENISFPSLNSLQLIIPALSLASGVTLYLSSRNKPKRNPDIYDLGEWILFTSPTPFNR 393
           GP E+I FPS+NSL L+ PAL  ASGV LYLS      R+ +  D+GEWILFTSPTPFNR
Sbjct: 14  GP-ESIRFPSVNSLDLVAPALGFASGVALYLSRF----RSGEDSDIGEWILFTSPTPFNR 68

Query: 392 FVFLRCPSIKFKGSELLEDLNEKLVKEDRHFI---SGRIQ--GKDGKVESFEEKLVYQRI 228
           FV LRCPSI F+GSELLED+NE+LVKEDRHF+   SGRIQ  G DG+    EEKL YQR 
Sbjct: 69  FVLLRCPSISFEGSELLEDVNERLVKEDRHFVRLNSGRIQVRGYDGRDAIVEEKLAYQRE 128

Query: 227 CLGTSDGGVISLDWPRNLDLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKGGCFPI 48
           C+G  DGGV+SLDWP NLDL EEHG+DTTV+L+PGTAEGSMD NVR FVCE L  G FP+
Sbjct: 129 CVGMDDGGVVSLDWPANLDLTEEHGLDTTVLLIPGTAEGSMDPNVRSFVCEALWRGYFPV 188

Query: 47  VMNPRGCAGSPLTT 6
           VMNPRGCAGSPLTT
Sbjct: 189 VMNPRGCAGSPLTT 202


>ref|XP_004142857.1| PREDICTED: uncharacterized protein LOC101219570 [Cucumis sativus]
          Length = 1789

 Score =  235 bits (599), Expect = 1e-59
 Identities = 124/202 (61%), Positives = 151/202 (74%), Gaps = 11/202 (5%)
 Frame = -2

Query: 578 QFGPFENI------SFPSLNSLQLIIPALSLASGVTLYLSSRNKPKRNPDIYDLGEWILF 417
           Q  PFE++         ++NSL+LI PAL  +SGV LYLS+    K N  + D+GEWI  
Sbjct: 53  QSNPFESLFHNLVSQVTTVNSLELIAPALGFSSGVALYLSNVVSSK-NSALSDIGEWIFL 111

Query: 416 TSPTPFNRFVFLRCPSIKFKGSE--LLEDLNEKLVKEDRHFI---SGRIQGKDGKVESFE 252
            SPTPFNRFVFLRCPSI F GS+  L+ED++E+LVKE RHF+   SGR++   G+ E  E
Sbjct: 112 CSPTPFNRFVFLRCPSIAFPGSDTNLVEDVSERLVKEGRHFVRLNSGRMKATTGEDEK-E 170

Query: 251 EKLVYQRICLGTSDGGVISLDWPRNLDLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCEL 72
           +KL YQR+C+ T DGGVISLDWP +L+LREEHG+DTT++LVPGT EGSMD+NVRL V E 
Sbjct: 171 DKLTYQRLCISTEDGGVISLDWPSHLNLREEHGLDTTLLLVPGTPEGSMDRNVRLSVIEA 230

Query: 71  LKGGCFPIVMNPRGCAGSPLTT 6
           L  G FPIVMNPRGCAGSPLTT
Sbjct: 231 LGRGLFPIVMNPRGCAGSPLTT 252


>ref|XP_004162301.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229461 [Cucumis sativus]
          Length = 1766

 Score =  234 bits (598), Expect = 1e-59
 Identities = 124/202 (61%), Positives = 151/202 (74%), Gaps = 11/202 (5%)
 Frame = -2

Query: 578 QFGPFENI------SFPSLNSLQLIIPALSLASGVTLYLSSRNKPKRNPDIYDLGEWILF 417
           Q  PFE++         ++NSL+LI PAL  +SGV LYLS+    K N  + D+GEWI  
Sbjct: 53  QSNPFESLFHNLVSQVTTVNSLELIAPALGFSSGVALYLSNVVSSK-NSALSDIGEWIXL 111

Query: 416 TSPTPFNRFVFLRCPSIKFKGSE--LLEDLNEKLVKEDRHFI---SGRIQGKDGKVESFE 252
            SPTPFNRFVFLRCPSI F GS+  L+ED++E+LVKE RHF+   SGR++   G+ E  E
Sbjct: 112 CSPTPFNRFVFLRCPSIAFPGSDTNLVEDVSERLVKEGRHFVRLNSGRMKATTGEDEK-E 170

Query: 251 EKLVYQRICLGTSDGGVISLDWPRNLDLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCEL 72
           +KL YQR+C+ T DGGVISLDWP +L+LREEHG+DTT++LVPGT EGSMD+NVRL V E 
Sbjct: 171 DKLTYQRLCISTEDGGVISLDWPSHLNLREEHGLDTTLLLVPGTPEGSMDRNVRLSVIEA 230

Query: 71  LKGGCFPIVMNPRGCAGSPLTT 6
           L  G FPIVMNPRGCAGSPLTT
Sbjct: 231 LGRGLFPIVMNPRGCAGSPLTT 252


>ref|XP_002326145.1| predicted protein [Populus trichocarpa] gi|222833338|gb|EEE71815.1|
           predicted protein [Populus trichocarpa]
          Length = 1852

 Score =  233 bits (595), Expect = 3e-59
 Identities = 118/193 (61%), Positives = 149/193 (77%), Gaps = 5/193 (2%)
 Frame = -2

Query: 569 PFENI--SFPSLNSLQLIIPALSLASGVTLYLSSRNKPKRNPDIYDLGEWILFTSPTPFN 396
           PF+N+   FPS N+  ++ PAL LASG+TLYLS  NK  ++ +I   GEWILF+SPTPFN
Sbjct: 47  PFKNLLSQFPSPNTPDILAPALGLASGLTLYLSQSNKFSKSSNI---GEWILFSSPTPFN 103

Query: 395 RFVFLRCPSIKFKGSELLEDLNEKLVKEDRHFI---SGRIQGKDGKVESFEEKLVYQRIC 225
           RFV LRCPSI F+GSE +E++N+KLVKEDRHF+   SG+I    G+  S   KL +QR+C
Sbjct: 104 RFVILRCPSISFEGSEFIENVNDKLVKEDRHFVRLNSGKIGV--GRESSEGLKLEFQRVC 161

Query: 224 LGTSDGGVISLDWPRNLDLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKGGCFPIV 45
           + T DGGVISLDWP +L+L EEHG+DTT++LVPGTA+GS + NVR FV + LK G FP+V
Sbjct: 162 VNTEDGGVISLDWPADLELEEEHGLDTTLLLVPGTAKGSSEDNVRFFVVDALKRGFFPVV 221

Query: 44  MNPRGCAGSPLTT 6
           MNPRGCA SP+TT
Sbjct: 222 MNPRGCAASPITT 234


>ref|XP_002516212.1| conserved hypothetical protein [Ricinus communis]
           gi|223544698|gb|EEF46214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1731

 Score =  224 bits (572), Expect = 1e-56
 Identities = 113/189 (59%), Positives = 140/189 (74%), Gaps = 7/189 (3%)
 Frame = -2

Query: 551 FPSLNSLQLIIPALSLASGVTLYLSSRNKPKRNPDIY---DLGEWILFTSPTPFNRFVFL 381
           FPS NSL  + P L LASG+TLYLS       N +     ++GEWILF SPTPFNRFVFL
Sbjct: 57  FPSQNSLDFLAPILGLASGLTLYLSQSKSTNPNSNSLINSNIGEWILFASPTPFNRFVFL 116

Query: 380 RCPSIKFKGSELLEDLNEKLVKEDRHFIS---GRIQGKDGKVESF-EEKLVYQRICLGTS 213
           RCPSI  +G   LE+++E+ ++EDRHF+    GRI+ ++  +    EEKL YQR+C+ T 
Sbjct: 117 RCPSISLEG---LENVSERFLEEDRHFVRLSRGRIEARESGIGGIIEEKLEYQRVCVSTE 173

Query: 212 DGGVISLDWPRNLDLREEHGMDTTVVLVPGTAEGSMDKNVRLFVCELLKGGCFPIVMNPR 33
           DGGVISLDWP NL+LREEHG+DTT++LVPGT EGSM +NVR FVC+ L  G FP+V+NPR
Sbjct: 174 DGGVISLDWPANLELREEHGLDTTLLLVPGTTEGSMCENVRDFVCDALMRGFFPVVLNPR 233

Query: 32  GCAGSPLTT 6
           GCA SPLTT
Sbjct: 234 GCARSPLTT 242


Top