BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002387
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   107   8e-22
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact...   107   8e-22
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]   107   8e-22
ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   103   2e-20
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact...   103   2e-20

>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
           [Vitis vinifera]
          Length = 2367

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/73 (72%), Positives = 56/73 (76%)
 Frame = -2

Query: 219 SSIAPPVAMQPSYSIPLSPXXXXXXXXXXXXKWMQLNSKRYGDKRKFGFVETQKEDMPPE 40
           S+I PP A QPSY++  SP            KWMQLNSKRYGDKRKFGFVETQKEDMPPE
Sbjct: 15  STIPPPPAAQPSYTVLPSPAEAEARLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPE 74

Query: 39  HVRKIIRDHGDMS 1
           HVRKIIRDHGDMS
Sbjct: 75  HVRKIIRDHGDMS 87


>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
           [Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
           protein product [Vitis vinifera]
          Length = 2347

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/73 (72%), Positives = 56/73 (76%)
 Frame = -2

Query: 219 SSIAPPVAMQPSYSIPLSPXXXXXXXXXXXXKWMQLNSKRYGDKRKFGFVETQKEDMPPE 40
           S+I PP A QPSY++  SP            KWMQLNSKRYGDKRKFGFVETQKEDMPPE
Sbjct: 15  STIPPPPAAQPSYTVLPSPAEAEARLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPE 74

Query: 39  HVRKIIRDHGDMS 1
           HVRKIIRDHGDMS
Sbjct: 75  HVRKIIRDHGDMS 87


>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
          Length = 2294

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/73 (72%), Positives = 56/73 (76%)
 Frame = -2

Query: 219 SSIAPPVAMQPSYSIPLSPXXXXXXXXXXXXKWMQLNSKRYGDKRKFGFVETQKEDMPPE 40
           S+I PP A QPSY++  SP            KWMQLNSKRYGDKRKFGFVETQKEDMPPE
Sbjct: 15  STIPPPPAAQPSYTVLPSPAEAEARLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPE 74

Query: 39  HVRKIIRDHGDMS 1
           HVRKIIRDHGDMS
Sbjct: 75  HVRKIIRDHGDMS 87


>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
           8-like [Cucumis sativus]
          Length = 2347

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/89 (61%), Positives = 57/89 (64%)
 Frame = -2

Query: 267 MWNNXXXXXXXXXXXGSSIAPPVAMQPSYSIPLSPXXXXXXXXXXXXKWMQLNSKRYGDK 88
           MWNN            SSI PP A QPSY++  SP            KW QLNSKRY DK
Sbjct: 1   MWNNGQIAPPGTGG--SSIPPPPAAQPSYTVLPSPAEAEAKLEEKARKWQQLNSKRYSDK 58

Query: 87  RKFGFVETQKEDMPPEHVRKIIRDHGDMS 1
           RKFGFVETQKEDMP EHVRKIIRDHGDMS
Sbjct: 59  RKFGFVETQKEDMPREHVRKIIRDHGDMS 87


>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
           sativus]
          Length = 2347

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/89 (61%), Positives = 57/89 (64%)
 Frame = -2

Query: 267 MWNNXXXXXXXXXXXGSSIAPPVAMQPSYSIPLSPXXXXXXXXXXXXKWMQLNSKRYGDK 88
           MWNN            SSI PP A QPSY++  SP            KW QLNSKRY DK
Sbjct: 1   MWNNGQIAPPGTGG--SSIPPPPAAQPSYTVLPSPAEAEAKLEEKARKWQQLNSKRYSDK 58

Query: 87  RKFGFVETQKEDMPPEHVRKIIRDHGDMS 1
           RKFGFVETQKEDMP EHVRKIIRDHGDMS
Sbjct: 59  RKFGFVETQKEDMPREHVRKIIRDHGDMS 87