BLASTX nr result

ID: Coptis23_contig00002383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002383
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272699.1| PREDICTED: uncharacterized protein LOC100240...   350   3e-94
ref|XP_004142955.1| PREDICTED: uncharacterized protein LOC101204...   335   1e-89
ref|XP_002318110.1| predicted protein [Populus trichocarpa] gi|2...   334   2e-89
ref|XP_003531175.1| PREDICTED: uncharacterized protein LOC100499...   334   3e-89
gb|AFK38719.1| unknown [Medicago truncatula]                          333   4e-89

>ref|XP_002272699.1| PREDICTED: uncharacterized protein LOC100240870 [Vitis vinifera]
           gi|297738321|emb|CBI27522.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  350 bits (899), Expect = 3e-94
 Identities = 172/257 (66%), Positives = 205/257 (79%), Gaps = 2/257 (0%)
 Frame = -3

Query: 972 MEVLFNQLAKSSPSCRDSLKVLEADIHHANTLAAAIPRAKGGVCIQMKLAYNSLTPLFLF 793
           MEV+  QLA+ S   +DS+KVLEAD+ HAN LAAAIPR KGG  +QMKLAYN L P+FLF
Sbjct: 1   MEVVHYQLARCS--YQDSIKVLEADVQHANALAAAIPRGKGGARLQMKLAYNPLAPVFLF 58

Query: 792 LVQWMDCTCTCLLPIYSSFFHILIYKVYGDGRTKSISSHGREATIGEFYAVILPSLEQLQ 613
           L+QWMDC+CTCLLP Y   FHILIYKVY DGR  +IS+HGR+ATI +FYAVILPSL+++ 
Sbjct: 59  LLQWMDCSCTCLLPKYLDLFHILIYKVYTDGRP-NISAHGRKATIRDFYAVILPSLQRIH 117

Query: 612 GTEMDV-TQEKNQRRVE-FGRKGIEERKKLFDMDWEREDECGICMELCAKMVLPNCCHSM 439
           G  M++   E     +E +G+K  EE  +L +MD +REDECGIC+E C KMVLPNCCH+M
Sbjct: 118 GNIMELDNDEDGHPEIEMYGKKRTEEDGRLSNMDLKREDECGICLEPCTKMVLPNCCHAM 177

Query: 438 CINCYRDWNTRSESCPFCRGSLKRVSSSDLWVLTNSGDFLDSETVSKEDLSRFYLYIDKL 259
           CINCYRDWNTRSESCPFCRGS+KRV+S DLWVLT   D +++ETV +EDL RFYLYI  L
Sbjct: 178 CINCYRDWNTRSESCPFCRGSIKRVNSEDLWVLTCGDDVVNTETVCREDLLRFYLYIHHL 237

Query: 258 PRDIPDALFLVYYEYLI 208
           P+  PDALFLVYYEYLI
Sbjct: 238 PKHYPDALFLVYYEYLI 254


>ref|XP_004142955.1| PREDICTED: uncharacterized protein LOC101204614 [Cucumis sativus]
           gi|449494510|ref|XP_004159565.1| PREDICTED:
           uncharacterized protein LOC101226593 [Cucumis sativus]
          Length = 251

 Score =  335 bits (859), Expect = 1e-89
 Identities = 164/254 (64%), Positives = 197/254 (77%), Gaps = 2/254 (0%)
 Frame = -3

Query: 963 LFNQLAKSSPSCRDSLKVLEADIHHANTLAAAIPRAKGGVCIQMKLAYNSLTPLFLFLVQ 784
           ++ +LA SS  C DSLKVLE D+  ANTLAAAIPRAK G  +QMKL YN L P FLFL+Q
Sbjct: 1   MYYRLAMSS--CSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQ 58

Query: 783 WMDCTCTCLLPIYSSFFHILIYKVYGDGRTKSISSHGREATIGEFYAVILPSLEQLQGT- 607
           W+DC+CTC+LP Y +FFHIL+YKVY DGR  +IS+HGR+AT+ +FYAVILPSL++LQ   
Sbjct: 59  WLDCSCTCILPRYLNFFHILVYKVYTDGRP-NISAHGRKATVKDFYAVILPSLQRLQADI 117

Query: 606 -EMDVTQEKNQRRVEFGRKGIEERKKLFDMDWEREDECGICMELCAKMVLPNCCHSMCIN 430
            E D  ++K+ +      + I+   KL + D EREDECGIC+E   KMVLPNCCHSMCI 
Sbjct: 118 EEFDSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIK 177

Query: 429 CYRDWNTRSESCPFCRGSLKRVSSSDLWVLTNSGDFLDSETVSKEDLSRFYLYIDKLPRD 250
           CY +WN RSESCPFCRGSLKR+ S DLWVLT + D +D+E VSKEDLSRFYLYI  LP++
Sbjct: 178 CYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKE 237

Query: 249 IPDALFLVYYEYLI 208
            PDALFLVYYEYLI
Sbjct: 238 YPDALFLVYYEYLI 251


>ref|XP_002318110.1| predicted protein [Populus trichocarpa] gi|222858783|gb|EEE96330.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  334 bits (857), Expect = 2e-89
 Identities = 161/244 (65%), Positives = 194/244 (79%), Gaps = 2/244 (0%)
 Frame = -3

Query: 933 SCRDSLKVLEADIHHANTLAAAIPRAKGGVCIQMKLAYNSLTPLFLFLVQWMDCTCTCLL 754
           S +DSLKVLEADI HAN LAA+IPRAK G C+QMKL YN L P+FLFL+QWMDC+CTCLL
Sbjct: 3   SYKDSLKVLEADIQHANVLAASIPRAKSGSCLQMKLVYNHLAPIFLFLLQWMDCSCTCLL 62

Query: 753 PIYSSFFHILIYKVYGDGRTKSISSHGREATIGEFYAVILPSLEQLQGT--EMDVTQEKN 580
             Y + FHI++YKV  D + K ISS GR+ATI +FYAVILPSL++L G   E DVTQE+ 
Sbjct: 63  STYFNLFHIVVYKVCSDRKPK-ISSCGRKATIRQFYAVILPSLQRLHGDTKEPDVTQEEG 121

Query: 579 QRRVEFGRKGIEERKKLFDMDWEREDECGICMELCAKMVLPNCCHSMCINCYRDWNTRSE 400
                  +  +E+R+K  D+D  REDECGIC+E C KMV+P+CCH+MCINCY +WNTRSE
Sbjct: 122 HFLEMIVKNRLEDRRKRSDVDLLREDECGICLEPCTKMVVPSCCHAMCINCYHEWNTRSE 181

Query: 399 SCPFCRGSLKRVSSSDLWVLTNSGDFLDSETVSKEDLSRFYLYIDKLPRDIPDALFLVYY 220
           SCPFCRGSLKRV+S DLWVLT S D +D+ TV KED+ RFYLYI+ LP+DIPD LFL+YY
Sbjct: 182 SCPFCRGSLKRVNSEDLWVLTCSSDVVDTNTVLKEDILRFYLYINNLPKDIPDDLFLMYY 241

Query: 219 EYLI 208
           E+LI
Sbjct: 242 EHLI 245


>ref|XP_003531175.1| PREDICTED: uncharacterized protein LOC100499999 [Glycine max]
          Length = 256

 Score =  334 bits (856), Expect = 3e-89
 Identities = 163/259 (62%), Positives = 204/259 (78%), Gaps = 4/259 (1%)
 Frame = -3

Query: 972 MEVLFNQLAKSSPSCRDSLKVLEADIHHANTLAAAIPRAKGGVCIQMKLAYNSLTPLFLF 793
           ME++  Q  +   S  DSLK+LEADI HAN LAAAIPRAKGG  +QMKL YN L PLFL 
Sbjct: 1   MEMMAYQFTRLPYS--DSLKLLEADIQHANALAAAIPRAKGGTLLQMKLVYNHLAPLFLL 58

Query: 792 LVQWMDCTCTCLLPIYSSFFHILIYKVYGDGRTKSISSHGREATIGEFYAVILPSLEQLQ 613
           L+QWM C+CTC L  Y   FHI++YKV+ DGR+ +++SHGR+A+I +FYAVILPSLE+L 
Sbjct: 59  LLQWMKCSCTCFLHRYLDLFHIVVYKVHDDGRS-NVASHGRKASIRDFYAVILPSLERLL 117

Query: 612 GT--EMDVTQEKNQR--RVEFGRKGIEERKKLFDMDWEREDECGICMELCAKMVLPNCCH 445
           G+  ++D+ ++ +     + +G+K +E   KL ++D EREDECGIC+E C KMVLPNCCH
Sbjct: 118 GSLEKLDICKKSHSSIDGISYGKKMMEGDGKLINIDLEREDECGICLEPCTKMVLPNCCH 177

Query: 444 SMCINCYRDWNTRSESCPFCRGSLKRVSSSDLWVLTNSGDFLDSETVSKEDLSRFYLYID 265
           +MCI CYR WNTRSESCPFCRGSL+RV+S DLWVLT + D +D+ETVSKEDL RFYLYI+
Sbjct: 178 AMCIKCYRKWNTRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFYLYIN 237

Query: 264 KLPRDIPDALFLVYYEYLI 208
            LP+D PDALFL+YYEYLI
Sbjct: 238 SLPKDHPDALFLMYYEYLI 256


>gb|AFK38719.1| unknown [Medicago truncatula]
          Length = 254

 Score =  333 bits (855), Expect = 4e-89
 Identities = 162/244 (66%), Positives = 194/244 (79%), Gaps = 5/244 (2%)
 Frame = -3

Query: 924 DSLKVLEADIHHANTLAAAIPRAKGGVCIQMKLAYNSLTPLFLFLVQWMDCTCTCLLPIY 745
           DSLK+LEADIHHAN LAAAIPR KGG   QMKL Y+ L PLFL L+QWMDC+C+C L  Y
Sbjct: 12  DSLKLLEADIHHANALAAAIPRGKGGSVFQMKLVYSQLAPLFLLLLQWMDCSCSCFLHRY 71

Query: 744 SSFFHILIYKVYGDGRTKSISSHGREATIGEFYAVILPSLEQLQGT----EMDVTQEKNQ 577
            +FFHI+IYKV+ DGR  SI+SHGR+ATI +FYAVILPSL++L G+    E+ +    + 
Sbjct: 72  LNFFHIIIYKVHNDGRP-SITSHGRKATIQDFYAVILPSLQRLHGSLEKLEICMKGHTSL 130

Query: 576 RRVEFGRKGIEERKKLF-DMDWEREDECGICMELCAKMVLPNCCHSMCINCYRDWNTRSE 400
               +G+K IE   KL  ++D EREDECGIC+E C KMVLPNCCH+MCI CYR WNT+SE
Sbjct: 131 DGPSYGKKMIEANGKLTTNVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNTKSE 190

Query: 399 SCPFCRGSLKRVSSSDLWVLTNSGDFLDSETVSKEDLSRFYLYIDKLPRDIPDALFLVYY 220
           SCPFCRGS++RV+S DLWVLT  GD +D+ETVSKEDL RFYLYI+ LP+D PDALFL+YY
Sbjct: 191 SCPFCRGSIRRVNSEDLWVLTCDGDVVDAETVSKEDLLRFYLYINSLPKDYPDALFLMYY 250

Query: 219 EYLI 208
           EYLI
Sbjct: 251 EYLI 254


Top