BLASTX nr result

ID: Coptis23_contig00002372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002372
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146817.1| PREDICTED: putative oxidoreductase GLYR1-lik...   286   9e-76
ref|XP_002280297.1| PREDICTED: putative oxidoreductase GLYR1-lik...   284   5e-75
emb|CBI35963.3| unnamed protein product [Vitis vinifera]              284   5e-75
ref|XP_002521394.1| 3-hydroxyisobutyrate dehydrogenase, putative...   282   2e-74
ref|XP_002327551.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-73

>ref|XP_004146817.1| PREDICTED: putative oxidoreductase GLYR1-like [Cucumis sativus]
           gi|449476650|ref|XP_004154796.1| PREDICTED: putative
           oxidoreductase GLYR1-like [Cucumis sativus]
          Length = 311

 Score =  286 bits (733), Expect = 9e-76
 Identities = 143/163 (87%), Positives = 157/163 (96%)
 Frame = -1

Query: 489 GEYGAANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAEDGQLIFL 310
           GE GAA+GLSPGKGYVDVSTVDGATSKLI  ++K TGALFLEAPVSGSKKPAEDGQLIFL
Sbjct: 93  GENGAASGLSPGKGYVDVSTVDGATSKLISARIKDTGALFLEAPVSGSKKPAEDGQLIFL 152

Query: 309 TAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLIVNMIMGSMMASFSEGLLLSKKVG 130
           TAGD+ALYE VAP LDIMGKS+FYLG+VGNGAAMKL+VNMIMGSMMASFSEGLLLS+KVG
Sbjct: 153 TAGDKALYERVAPLLDIMGKSKFYLGEVGNGAAMKLVVNMIMGSMMASFSEGLLLSEKVG 212

Query: 129 LDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQK 1
           LDPS+LV+VVSQGAISAPM+S+KGPSMVQ++YPTAFPLKHQQK
Sbjct: 213 LDPSILVQVVSQGAISAPMYSLKGPSMVQSLYPTAFPLKHQQK 255


>ref|XP_002280297.1| PREDICTED: putative oxidoreductase GLYR1-like [Vitis vinifera]
          Length = 365

 Score =  284 bits (727), Expect = 5e-75
 Identities = 139/163 (85%), Positives = 155/163 (95%)
 Frame = -1

Query: 489 GEYGAANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAEDGQLIFL 310
           G++GAA+G+ PGKGYVDVSTVDGATSKLIG+ +KATGALFLEAPVSGSKKPAEDGQLIFL
Sbjct: 147 GKHGAASGIGPGKGYVDVSTVDGATSKLIGEHIKATGALFLEAPVSGSKKPAEDGQLIFL 206

Query: 309 TAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLIVNMIMGSMMASFSEGLLLSKKVG 130
           T GD++LYE VAP LDIMGKSRF+LG VGNGAAMKL+VNM+MGSMMASFSEGLLL +KVG
Sbjct: 207 TGGDKSLYETVAPLLDIMGKSRFFLGSVGNGAAMKLVVNMVMGSMMASFSEGLLLGEKVG 266

Query: 129 LDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQK 1
           LDP V+VEV+SQGAISAPMFSMKGPSMV++VYPTAFPLKHQQK
Sbjct: 267 LDPDVIVEVISQGAISAPMFSMKGPSMVKSVYPTAFPLKHQQK 309


>emb|CBI35963.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  284 bits (727), Expect = 5e-75
 Identities = 139/163 (85%), Positives = 155/163 (95%)
 Frame = -1

Query: 489 GEYGAANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAEDGQLIFL 310
           G++GAA+G+ PGKGYVDVSTVDGATSKLIG+ +KATGALFLEAPVSGSKKPAEDGQLIFL
Sbjct: 125 GKHGAASGIGPGKGYVDVSTVDGATSKLIGEHIKATGALFLEAPVSGSKKPAEDGQLIFL 184

Query: 309 TAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLIVNMIMGSMMASFSEGLLLSKKVG 130
           T GD++LYE VAP LDIMGKSRF+LG VGNGAAMKL+VNM+MGSMMASFSEGLLL +KVG
Sbjct: 185 TGGDKSLYETVAPLLDIMGKSRFFLGSVGNGAAMKLVVNMVMGSMMASFSEGLLLGEKVG 244

Query: 129 LDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQK 1
           LDP V+VEV+SQGAISAPMFSMKGPSMV++VYPTAFPLKHQQK
Sbjct: 245 LDPDVIVEVISQGAISAPMFSMKGPSMVKSVYPTAFPLKHQQK 287


>ref|XP_002521394.1| 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis]
           gi|223539472|gb|EEF41062.1| 3-hydroxyisobutyrate
           dehydrogenase, putative [Ricinus communis]
          Length = 348

 Score =  282 bits (722), Expect = 2e-74
 Identities = 138/163 (84%), Positives = 154/163 (94%)
 Frame = -1

Query: 489 GEYGAANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAEDGQLIFL 310
           G+ GAA G+ PGKGYVDVSTVDG TSKLIG  +KATGA FLEAPVSGSKKPAEDGQLIFL
Sbjct: 134 GKNGAAGGMGPGKGYVDVSTVDGGTSKLIGGHIKATGASFLEAPVSGSKKPAEDGQLIFL 193

Query: 309 TAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLIVNMIMGSMMASFSEGLLLSKKVG 130
           TAGD+ LYE+VAPFLDIMGKSRFYLGDVGNGAAMKL+VNMIMGSMMA+FSEG+LL +KVG
Sbjct: 194 TAGDKPLYEIVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGILLGEKVG 253

Query: 129 LDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQK 1
           LDP+V+VEVVSQGAISAPM+SMKGPSM++++YPTAFPLKHQQK
Sbjct: 254 LDPNVIVEVVSQGAISAPMYSMKGPSMIKSIYPTAFPLKHQQK 296


>ref|XP_002327551.1| predicted protein [Populus trichocarpa] gi|222836105|gb|EEE74526.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  278 bits (712), Expect = 3e-73
 Identities = 138/163 (84%), Positives = 156/163 (95%)
 Frame = -1

Query: 489 GEYGAANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAEDGQLIFL 310
           G++GAA+G+ PGKGYVDVSTVDG TSKLI   +KA+GA FLEAPVSGSKKPAEDGQLIFL
Sbjct: 66  GKHGAASGMGPGKGYVDVSTVDGGTSKLICGHIKASGASFLEAPVSGSKKPAEDGQLIFL 125

Query: 309 TAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLIVNMIMGSMMASFSEGLLLSKKVG 130
           TAGD++LYE VAPFLDIMGKSRFYLG+VGNGAAMKLIVNMIMGSMMA+FSEGLLLS+KVG
Sbjct: 126 TAGDKSLYETVAPFLDIMGKSRFYLGEVGNGAAMKLIVNMIMGSMMATFSEGLLLSEKVG 185

Query: 129 LDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQK 1
           LDP+VLVEVVS+GAISAPM+S+KGPSMV+++YPTAFPLKHQQK
Sbjct: 186 LDPNVLVEVVSEGAISAPMYSLKGPSMVKSLYPTAFPLKHQQK 228


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