BLASTX nr result

ID: Coptis23_contig00002367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002367
         (2052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280999.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   415   e-113
emb|CAN69886.1| hypothetical protein VITISV_005072 [Vitis vinifera]   415   e-113
ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein lig...   403   e-110
ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   402   e-109
ref|XP_003537289.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   396   e-107

>ref|XP_002280999.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Vitis vinifera]
          Length = 362

 Score =  415 bits (1066), Expect = e-113
 Identities = 211/277 (76%), Positives = 229/277 (82%), Gaps = 2/277 (0%)
 Frame = -2

Query: 1556 HRGSGPPHVD--HTNWXXXXXXXXXXXXXXXXXVEHQKAVTIRNDVNLKKESLRVEVDQE 1383
            HRG  PPH+D  H N+                 VEHQKAVTIRNDVNLKKE+LR+E D+E
Sbjct: 83   HRGGPPPHMDPAHANFVAGRYSCGPVVPPHAPYVEHQKAVTIRNDVNLKKETLRLEPDEE 142

Query: 1382 NPGRFLVAFTFDATVAGSITIFFFAKEEADCNLTPMKEILQPITVSFQQGLGQTFRQPSG 1203
            +PGRFLVAFTFDATV GSITI FFAKE  DC+L+PMKE L+P+TV FQQGLGQ FRQP+G
Sbjct: 143  HPGRFLVAFTFDATVPGSITIIFFAKEGEDCSLSPMKENLEPVTVHFQQGLGQKFRQPTG 202

Query: 1202 TGIDFSTLEESELLKEGDMQIYPLAVKAEASPLGHNETNGGSPDTKPTNSQITQAVFEKK 1023
            TGIDFST EESELLKEGDM +YPL VKAEASP+     +G +P     NSQIT+AVFEK 
Sbjct: 203  TGIDFSTFEESELLKEGDMDVYPLEVKAEASPINQIGADG-NPIPGTMNSQITKAVFEK- 260

Query: 1022 EKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDSDFDGNDPGKECVICLSEPRDTTVLP 843
            EKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVD DFD NDPGKECVICLSEPRDTTVLP
Sbjct: 261  EKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDGDFDSNDPGKECVICLSEPRDTTVLP 320

Query: 842  CRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVN 732
            CRHMCMCSGCAKVLRFQT+RCPICRQ VERLLEIKV+
Sbjct: 321  CRHMCMCSGCAKVLRFQTDRCPICRQLVERLLEIKVS 357


>emb|CAN69886.1| hypothetical protein VITISV_005072 [Vitis vinifera]
          Length = 292

 Score =  415 bits (1066), Expect = e-113
 Identities = 211/277 (76%), Positives = 229/277 (82%), Gaps = 2/277 (0%)
 Frame = -2

Query: 1556 HRGSGPPHVD--HTNWXXXXXXXXXXXXXXXXXVEHQKAVTIRNDVNLKKESLRVEVDQE 1383
            HRG  PPH+D  H N+                 VEHQKAVTIRNDVNLKKE+LR+E D+E
Sbjct: 13   HRGGPPPHMDPAHANFVAGRYSCGPVVPPHAPYVEHQKAVTIRNDVNLKKETLRLEPDEE 72

Query: 1382 NPGRFLVAFTFDATVAGSITIFFFAKEEADCNLTPMKEILQPITVSFQQGLGQTFRQPSG 1203
            +PGRFLVAFTFDATV GSITI FFAKE  DC+L+PMKE L+P+TV FQQGLGQ FRQP+G
Sbjct: 73   HPGRFLVAFTFDATVPGSITIIFFAKEGEDCSLSPMKENLEPVTVHFQQGLGQKFRQPTG 132

Query: 1202 TGIDFSTLEESELLKEGDMQIYPLAVKAEASPLGHNETNGGSPDTKPTNSQITQAVFEKK 1023
            TGIDFST EESELLKEGDM +YPL VKAEASP+     +G +P     NSQIT+AVFEK 
Sbjct: 133  TGIDFSTFEESELLKEGDMDVYPLEVKAEASPINQIGADG-NPIPGTMNSQITKAVFEK- 190

Query: 1022 EKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDSDFDGNDPGKECVICLSEPRDTTVLP 843
            EKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVD DFD NDPGKECVICLSEPRDTTVLP
Sbjct: 191  EKGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDGDFDSNDPGKECVICLSEPRDTTVLP 250

Query: 842  CRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVN 732
            CRHMCMCSGCAKVLRFQT+RCPICRQ VERLLEIKV+
Sbjct: 251  CRHMCMCSGCAKVLRFQTDRCPICRQLVERLLEIKVS 287


>ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus] gi|449513666|ref|XP_004164388.1| PREDICTED:
            probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus]
          Length = 368

 Score =  403 bits (1036), Expect = e-110
 Identities = 209/281 (74%), Positives = 227/281 (80%), Gaps = 2/281 (0%)
 Frame = -2

Query: 1556 HRGSGPPHVDHTNWXXXXXXXXXXXXXXXXXVEHQKAVTIRNDVNLKKESLRVEVDQENP 1377
            HRG G P +D  +W                 VEHQKAVTIRNDVNLKKE+L+VE D+ENP
Sbjct: 90   HRG-GHPQMDPAHWVGGRYPYGPPMPPQTPYVEHQKAVTIRNDVNLKKETLKVEPDEENP 148

Query: 1376 GRFLVAFTFDATVAGSITIFFFAKEEADCNLTPMKE-ILQPITVSFQQGLGQTFRQPSGT 1200
            G+FLV+FTFDATVAGSITIFFFAKE  DCNLTP+KE I QPITV F+QGLGQ FRQPSGT
Sbjct: 149  GQFLVSFTFDATVAGSITIFFFAKEGEDCNLTPVKEDIFQPITVHFEQGLGQKFRQPSGT 208

Query: 1199 GIDFSTLEESELLKEGDMQIYPLAVKAEASPLGHNETNGGSPDTKPTNSQITQAVFEKKE 1020
            GIDFS  EESE LK  D  +YPL VKAEAS       +G +P   P NSQITQAVFEK +
Sbjct: 209  GIDFSKFEESEFLKVNDTDVYPLVVKAEASTDTQTGPDG-TPVPDPMNSQITQAVFEK-D 266

Query: 1019 KGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDSDFDGNDPGKECVICLSEPRDTTVLPC 840
            KGEYQVRV+KQILWVNGMRYELQEIYGIGNSV+ D DGNDPGKECVICLSEPRDTTVLPC
Sbjct: 267  KGEYQVRVLKQILWVNGMRYELQEIYGIGNSVEGDVDGNDPGKECVICLSEPRDTTVLPC 326

Query: 839  RHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKV-NKPDE 720
            RHMCMCSGCAKVLRFQTNRCPICRQPV+RLLEI+V N P+E
Sbjct: 327  RHMCMCSGCAKVLRFQTNRCPICRQPVDRLLEIRVSNGPEE 367


>ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Glycine max]
          Length = 349

 Score =  402 bits (1032), Expect = e-109
 Identities = 198/250 (79%), Positives = 223/250 (89%), Gaps = 3/250 (1%)
 Frame = -2

Query: 1460 EHQKAVTIRNDVNLKKESLRVEVDQENPGRFLVAFTFDATVAGSITIFFFAKEEADCNLT 1281
            EHQKAVTI+NDVN+KKE+LR+E D ENPGRFLV+FTFDATV+GSITI FFAKE   C LT
Sbjct: 101  EHQKAVTIKNDVNIKKETLRIEPDDENPGRFLVSFTFDATVSGSITILFFAKEGEGCTLT 160

Query: 1280 PMKE-ILQPITVSFQQGLGQTFRQPSGTGIDFSTLEESELLKEGDMQIYPLAVKAEASPL 1104
            PMKE +L P+TV+FQQGLGQ F+QP+GTGIDFST EESELLK GDM +YP+A+KA+AS  
Sbjct: 161  PMKENVLPPVTVNFQQGLGQKFKQPAGTGIDFSTFEESELLKVGDMDVYPVAIKADASSS 220

Query: 1103 GHNETNGG-SPDTKPTNSQITQAVFEKKEKGEYQVRVVKQILWVNGMRYELQEIYGIGNS 927
             H+E+    +P +  +NSQITQAVFEK EKGE+QV+VVKQILWVNGMRYELQEIYGIGNS
Sbjct: 221  DHDESKSNETPSSGSSNSQITQAVFEK-EKGEFQVKVVKQILWVNGMRYELQEIYGIGNS 279

Query: 926  VDSDFDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 747
            V+SD DGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL
Sbjct: 280  VESDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 339

Query: 746  EIKVN-KPDE 720
            EIKV  +P+E
Sbjct: 340  EIKVGPEPEE 349


>ref|XP_003537289.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Glycine max]
          Length = 349

 Score =  396 bits (1018), Expect = e-107
 Identities = 195/244 (79%), Positives = 218/244 (89%), Gaps = 2/244 (0%)
 Frame = -2

Query: 1460 EHQKAVTIRNDVNLKKESLRVEVDQENPGRFLVAFTFDATVAGSITIFFFAKEEADCNLT 1281
            EHQKAVTI+NDVN+KKE+LR+E D ENPG FLV+FTFDATV+GSITI FFAKE   C LT
Sbjct: 101  EHQKAVTIKNDVNIKKETLRIEPDDENPGCFLVSFTFDATVSGSITILFFAKEGEGCTLT 160

Query: 1280 PMKE-ILQPITVSFQQGLGQTFRQPSGTGIDFSTLEESELLKEGDMQIYPLAVKAEASPL 1104
            PMKE +L P+TV+FQQGLGQ F+QP+GTGIDFST EESELLK GDM +YP+A+KA+AS  
Sbjct: 161  PMKENVLPPVTVNFQQGLGQKFKQPAGTGIDFSTFEESELLKAGDMDVYPVAIKADASSG 220

Query: 1103 GHNETNGG-SPDTKPTNSQITQAVFEKKEKGEYQVRVVKQILWVNGMRYELQEIYGIGNS 927
             H+E+    +P +  +NSQITQAVFEK EKGE+QV+VVKQILWVNGMRYELQEIYGIGNS
Sbjct: 221  DHDESKSNETPASGSSNSQITQAVFEK-EKGEFQVKVVKQILWVNGMRYELQEIYGIGNS 279

Query: 926  VDSDFDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 747
            V+SD DGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL
Sbjct: 280  VESDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 339

Query: 746  EIKV 735
            EIKV
Sbjct: 340  EIKV 343


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