BLASTX nr result

ID: Coptis23_contig00002363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002363
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261...   106   2e-20
emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]   105   3e-20
ref|XP_002517157.1| chloroplast-targeted copper chaperone, putat...   104   7e-20
ref|XP_004173131.1| PREDICTED: uncharacterized LOC101204739 [Cuc...    95   4e-17
ref|XP_004150899.1| PREDICTED: uncharacterized protein LOC101204...    95   4e-17

>ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261454 [Vitis vinifera]
          Length = 491

 Score =  106 bits (264), Expect = 2e-20
 Identities = 66/127 (51%), Positives = 74/127 (58%), Gaps = 26/127 (20%)
 Frame = -1

Query: 786 NIPMPQMGNFPMGHMGN-IPAVQGLPAAPMNAGAGG--------------YFQGAAPEYH 652
           N+PM QMGN  M  MGN +PAVQGLPA  +NAG  G              YFQGA PE  
Sbjct: 366 NMPMGQMGNMSMAQMGNNMPAVQGLPAGAINAGGAGGGAPPGYGGGVPPGYFQGAGPEVM 425

Query: 651 AGNPYHXXXXXXXXXXXQRTNG------MMYARPPPAVAYM----PSPEPYT-YFSDENT 505
           AGNPY+           QR +G      MMYARPPPAV Y+    P P+PYT +FSDENT
Sbjct: 426 AGNPYYQQQLAAMMMNQQRAHGNERFQPMMYARPPPAVNYLPPYPPQPDPYTHFFSDENT 485

Query: 504 SSSCNVM 484
            SSCNVM
Sbjct: 486 -SSCNVM 491


>emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]
          Length = 136

 Score =  105 bits (262), Expect = 3e-20
 Identities = 66/127 (51%), Positives = 74/127 (58%), Gaps = 26/127 (20%)
 Frame = -1

Query: 786 NIPMPQMGNFPMGHMGN-IPAVQGLPAAPMNAGA--------------GGYFQGAAPEYH 652
           N+PM QMGN  M  MGN +PAVQGLPA  +NAG                GYFQGA PE  
Sbjct: 11  NMPMGQMGNMSMAQMGNNMPAVQGLPAGAINAGGVSGGAPPGYGGGVPPGYFQGAGPEVM 70

Query: 651 AGNPYHXXXXXXXXXXXQRTNG------MMYARPPPAVAYM----PSPEPYT-YFSDENT 505
           AGNPY+           QR +G      MMYARPPPAV Y+    P P+PYT +FSDENT
Sbjct: 71  AGNPYYQQQLAAMMMNQQRAHGNERFQPMMYARPPPAVNYLPPYPPQPDPYTHFFSDENT 130

Query: 504 SSSCNVM 484
            SSCNVM
Sbjct: 131 -SSCNVM 136


>ref|XP_002517157.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
           gi|223543792|gb|EEF45320.1| chloroplast-targeted copper
           chaperone, putative [Ricinus communis]
          Length = 526

 Score =  104 bits (259), Expect = 7e-20
 Identities = 66/137 (48%), Positives = 70/137 (51%), Gaps = 36/137 (26%)
 Frame = -1

Query: 786 NIPMPQMGNFPMGHMGNIPAVQGLPAAPM------NAGAGGYFQGAAPEYHAGNPYH--- 634
           N+PM QMGN PMG MGNIPAVQGLPA          AG  GYFQGA P+   GNPYH   
Sbjct: 392 NMPMGQMGNMPMGQMGNIPAVQGLPAGAAMGGGGPGAGGNGYFQGAGPDLMPGNPYHHQQ 451

Query: 633 -------XXXXXXXXXXXQRTNGMMYARPPPAVAYMPSPEPYTY---------------- 523
                             +R   MMYARPPPAV YMP P PY+Y                
Sbjct: 452 QQQQYLQAIMNQQRAMGNERFQPMMYARPPPAVNYMP-PYPYSYAPPPHQGSDPYXXSDP 510

Query: 522 ----FSDENTSSSCNVM 484
               FSDENT SSCNVM
Sbjct: 511 YTNFFSDENT-SSCNVM 526


>ref|XP_004173131.1| PREDICTED: uncharacterized LOC101204739 [Cucumis sativus]
          Length = 550

 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 63/122 (51%), Positives = 66/122 (54%), Gaps = 21/122 (17%)
 Frame = -1

Query: 786 NIPMPQMGNFPMGHMGNIPAVQGLPAAPMNAGAGG--YFQGA--APEYHAGNPYHXXXXX 619
           N+PM QMGN  M  MG+IPAVQGLPA  MN G  G  YFQGA    E   GNPY      
Sbjct: 431 NMPMAQMGNMQMSQMGSIPAVQGLPAPAMNGGGPGSAYFQGAPGPAEAMGGNPYQQQQQY 490

Query: 618 XXXXXXQR----TNGMMYARPPPAVAYMPSPEPYTY-------------FSDENTSSSCN 490
                 QR       MMYARPPPAV Y+P P PY Y             FSDENT SSCN
Sbjct: 491 MAAMNHQRAAMANQAMMYARPPPAVNYLP-PYPYPYPPPPPAGDNYTHFFSDENT-SSCN 548

Query: 489 VM 484
           VM
Sbjct: 549 VM 550


>ref|XP_004150899.1| PREDICTED: uncharacterized protein LOC101204739 [Cucumis sativus]
          Length = 539

 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 63/122 (51%), Positives = 66/122 (54%), Gaps = 21/122 (17%)
 Frame = -1

Query: 786 NIPMPQMGNFPMGHMGNIPAVQGLPAAPMNAGAGG--YFQGA--APEYHAGNPYHXXXXX 619
           N+PM QMGN  M  MG+IPAVQGLPA  MN G  G  YFQGA    E   GNPY      
Sbjct: 420 NMPMAQMGNMQMSQMGSIPAVQGLPAPAMNGGGPGSAYFQGAPGPAEAMGGNPYQQQQQY 479

Query: 618 XXXXXXQR----TNGMMYARPPPAVAYMPSPEPYTY-------------FSDENTSSSCN 490
                 QR       MMYARPPPAV Y+P P PY Y             FSDENT SSCN
Sbjct: 480 MAAMNHQRAAMANQAMMYARPPPAVNYLP-PYPYPYPPPPPAGDNYTHFFSDENT-SSCN 537

Query: 489 VM 484
           VM
Sbjct: 538 VM 539


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