BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002352
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   536   e-150
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   534   e-149
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   527   e-147
ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   526   e-147
ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like i...   520   e-145

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  536 bits (1382), Expect = e-150
 Identities = 267/332 (80%), Positives = 289/332 (87%)
 Frame = -2

Query: 1071 LVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQTS 892
            LVTVQ L+ +M TDG N++PLPDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRAGHQTS
Sbjct: 8    LVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRAGHQTS 67

Query: 891  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKRYX 712
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKRY 
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 711  XXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEAVEKTSAAIKVLKQIGAYADAEKA 532
                           ARGH+IE+VPE+PLV+GDSAE+VEKTSAAI +LKQ+GAY DAEKA
Sbjct: 128  VVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAEKA 187

Query: 531  KDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAP 352
            KDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANVERLNLLKLAP
Sbjct: 188  KDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLKLAP 247

Query: 351  GGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVV 172
            GGHLGRFIIWTKSA EK+DSIYGSFDK SEKKKGY+LPR+KMVNADL+RIINSDEVQSVV
Sbjct: 248  GGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDEVQSVV 307

Query: 171  RPINNEVKRAPMXXXXXXXXXXXXXXXPYAKT 76
            RPI  EVKRAPM               PYAKT
Sbjct: 308  RPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKT 339


>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  534 bits (1376), Expect = e-149
 Identities = 265/332 (79%), Positives = 288/332 (86%)
 Frame = -2

Query: 1071 LVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQTS 892
            LVTVQ L+ +M TDG N++PLPDVMKASIRPDIV +VHSNISKNSRQPYAVSRRAGHQTS
Sbjct: 9    LVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSRRAGHQTS 68

Query: 891  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKRYX 712
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKRY 
Sbjct: 69   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 128

Query: 711  XXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEAVEKTSAAIKVLKQIGAYADAEKA 532
                           ARGH+IE+VPE+PLV+GDSAE+VEKTSAAI +LKQ+GAY DAEKA
Sbjct: 129  VVSAIAASAIPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAEKA 188

Query: 531  KDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAP 352
            KDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANV+RLNLLKLAP
Sbjct: 189  KDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDRLNLLKLAP 248

Query: 351  GGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVV 172
            GGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPRSKMVNADL+RIINSDEVQSVV
Sbjct: 249  GGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIINSDEVQSVV 308

Query: 171  RPINNEVKRAPMXXXXXXXXXXXXXXXPYAKT 76
            RPI  EVKRAPM               PYAKT
Sbjct: 309  RPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKT 340


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  527 bits (1357), Expect = e-147
 Identities = 262/332 (78%), Positives = 285/332 (85%)
 Frame = -2

Query: 1071 LVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQTS 892
            LVTVQ L+G+M TD S ++P+PDVMKASIRPDIVN+VHSNISKNSRQPYAVSRRAGHQTS
Sbjct: 8    LVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRAGHQTS 67

Query: 891  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKRYX 712
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKRY 
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 711  XXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEAVEKTSAAIKVLKQIGAYADAEKA 532
                           ARGH+IE+VPE+PLVV DSAE VEKT  AIKVLKQIGA+ DAEKA
Sbjct: 128  VVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAEGVEKTKEAIKVLKQIGAFPDAEKA 187

Query: 531  KDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAP 352
            KDS  IRPGKGKMRNRRY+S++GPL+VYGTEG+K VKAFRN+PGVEVANVERLNLLKLAP
Sbjct: 188  KDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAP 247

Query: 351  GGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVV 172
            GGHLGRF+IWTKSAFEKLDSIYGSFDK SEKKKGY+LPRSKMVN+DLSRIINSDEVQSVV
Sbjct: 248  GGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINSDEVQSVV 307

Query: 171  RPINNEVKRAPMXXXXXXXXXXXXXXXPYAKT 76
            RPI  +VKRA +               PYAKT
Sbjct: 308  RPIKKDVKRATLKKNPLKNLNSMLKLNPYAKT 339


>ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449520008|ref|XP_004167026.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  526 bits (1355), Expect = e-147
 Identities = 262/332 (78%), Positives = 286/332 (86%)
 Frame = -2

Query: 1071 LVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQTS 892
            LV+VQ LEG+M TD + ++PLPDVMKASIRPDIV++VHSNISKNSRQPYAVS+RAGHQTS
Sbjct: 8    LVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTS 67

Query: 891  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKRYX 712
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKRY 
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 711  XXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEAVEKTSAAIKVLKQIGAYADAEKA 532
                           ARGH+IE VPE+PLVV DSAE VEKTSAAIKVLKQ+GA+ DAEKA
Sbjct: 128  VVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFPDAEKA 187

Query: 531  KDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAP 352
            KDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVE+ANVERLNLLKLAP
Sbjct: 188  KDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAP 247

Query: 351  GGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVV 172
            GGHLGRF+IWTKSAFEKLDSIYGSF+K+SEKKKGYVLPRSKMVNADLSRIINSDEVQSVV
Sbjct: 248  GGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDEVQSVV 307

Query: 171  RPINNEVKRAPMXXXXXXXXXXXXXXXPYAKT 76
            +PI   VKR  +               PYAKT
Sbjct: 308  KPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKT 339


>ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
          Length = 371

 Score =  520 bits (1338), Expect = e-145
 Identities = 257/332 (77%), Positives = 284/332 (85%)
 Frame = -2

Query: 1071 LVTVQKLEGEMETDGSNSLPLPDVMKASIRPDIVNYVHSNISKNSRQPYAVSRRAGHQTS 892
            LVTVQ L+ +M TD S ++P+PDVMK+SIRPDIVN+VHSNISKNSRQPYAVSRRAGHQTS
Sbjct: 8    LVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSRRAGHQTS 67

Query: 891  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQIWRRWHRKININQKRYX 712
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+NQKRY 
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 711  XXXXXXXXXXXXXXXARGHKIENVPEIPLVVGDSAEAVEKTSAAIKVLKQIGAYADAEKA 532
                           ARGH+IE+VPE+PLVV DSAE+VEKT  AIKVLKQIGA+ DAEKA
Sbjct: 128  VVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAESVEKTKEAIKVLKQIGAFPDAEKA 187

Query: 531  KDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNLLKLAP 352
            KDS  IRPGKGKMRNRRY+S++GPLIVYGTEG+K VKAFRN+PGVEVANVERLNLLKLAP
Sbjct: 188  KDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAP 247

Query: 351  GGHLGRFIIWTKSAFEKLDSIYGSFDKASEKKKGYVLPRSKMVNADLSRIINSDEVQSVV 172
            GGHLGRF++WTKSAFEKLDSIYGSFDK SEKKKGY+LPR KMVN+DL+RIINSDEVQSVV
Sbjct: 248  GGHLGRFVVWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNSDLARIINSDEVQSVV 307

Query: 171  RPINNEVKRAPMXXXXXXXXXXXXXXXPYAKT 76
            RPI  +VK+A +               PYAKT
Sbjct: 308  RPIKKDVKKATLKKNPLKNLNSMLKLNPYAKT 339