BLASTX nr result
ID: Coptis23_contig00002333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002333
(2542 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269901.1| PREDICTED: protein TWIN LOV 1 [Vitis vinifera] 352 e-134
ref|XP_002315641.1| predicted protein [Populus trichocarpa] gi|2... 330 e-125
ref|NP_001234816.1| LOV/LOV protein [Solanum lycopersicum] gi|31... 328 e-121
ref|XP_002312647.1| predicted protein [Populus trichocarpa] gi|2... 309 e-119
ref|XP_003517926.1| PREDICTED: protein TWIN LOV 1-like [Glycine ... 296 e-114
>ref|XP_002269901.1| PREDICTED: protein TWIN LOV 1 [Vitis vinifera]
Length = 397
Score = 352 bits (903), Expect(2) = e-134
Identities = 184/284 (64%), Positives = 215/284 (75%)
Frame = -3
Query: 1802 MELELGLVDQSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNE 1623
ME +L L++QSFN RYS WV+EALDE+PDNFTITDP ISGHPIVFAS GFLKMSGYSK E
Sbjct: 1 MESQLALIEQSFNYRYSVWVREALDELPDNFTITDPSISGHPIVFASRGFLKMSGYSKEE 60
Query: 1622 VIGKNGRIFQGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEE 1443
VIGKNGR FQGP T RRS+ EI+EAI++ERTIQ LLNYRKDGTP WMLFH+SPVF+KE+
Sbjct: 61 VIGKNGRAFQGPGTSRRSITEIQEAIQEERTIQTILLNYRKDGTPIWMLFHMSPVFSKED 120
Query: 1442 GRVTHFLAVQVPISQKPRINGIASPRNGCYFSEDGSVLQEIVFGSCRREVCSDSVMESGR 1263
GRV HF+AVQVP+S+KPR +G R+G EDG ++IVFGSCRREVCSDSV+E
Sbjct: 121 GRVIHFVAVQVPMSRKPRWSGSGPGRDG--VCEDGCRSRDIVFGSCRREVCSDSVLELEH 178
Query: 1262 VRLLNSYMDAEERVVDAVDSCEASDAEKQKAAKAVNNILSVLRHYSELTSRLVCGRRCCX 1083
V S D++ R D + EASD EK++AA AVNNILS+L HYSELT +LVC +RC
Sbjct: 179 VLAFESLFDSDNR--DDEEPREASDQEKRRAAAAVNNILSLLTHYSELTGKLVCEKRCTL 236
Query: 1082 XXXXXXXXXXXXXXGRIKQSVVLADANLHDMPIVYVSDAFLKMT 951
GRIKQS VL D +L +MPIVY SDAFLK+T
Sbjct: 237 SGIGLLGASLIISLGRIKQSFVLTDPHLPEMPIVYASDAFLKLT 280
Score = 155 bits (392), Expect(2) = e-134
Identities = 75/116 (64%), Positives = 91/116 (78%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y RHEVLG C FL+G DTD Q++ESIQ+E+AC+VRILNYRKD +FWNLLH+SP+
Sbjct: 282 YARHEVLGCQCMFLSGVDTDPSTLLQVKESIQTEQACTVRILNYRKDRSSFWNLLHISPV 341
Query: 691 RNASGKIAFYAGVQIKEGCSNGSSEGLSPEMKQLGAVGAIKVAVRCSSMCAGSSKS 524
RNASGKIA+ VQ++EGC ++GLSPEM+Q VGA+KVAVR SSM AG SKS
Sbjct: 342 RNASGKIAYSVWVQMEEGCGYQDAQGLSPEMRQRSTVGAVKVAVRSSSMGAGPSKS 397
Score = 90.1 bits (222), Expect = 3e-15
Identities = 41/109 (37%), Positives = 71/109 (65%)
Frame = -3
Query: 1736 ALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNEVIGKNGRIFQGPRTDRRSVMEI 1557
+L + +F +TDP + PIV+AS FLK++GY+++EV+G G TD +++++
Sbjct: 249 SLGRIKQSFVLTDPHLPEMPIVYASDAFLKLTGYARHEVLGCQCMFLSGVDTDPSTLLQV 308
Query: 1556 REAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEEGRVTHFLAVQV 1410
+E+I+ E+ + +LNYRKD + FW L H+SPV N G++ + + VQ+
Sbjct: 309 KESIQTEQACTVRILNYRKDRSSFWNLLHISPVRN-ASGKIAYSVWVQM 356
Score = 65.5 bits (158), Expect = 7e-08
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y++ EV+G+N R GP T + +I+E+IQ ER +LNYRKDG W L H+SP+
Sbjct: 56 YSKEEVIGKNGRAFQGPGTSRRSITEIQEAIQEERTIQTILLNYRKDGTPIWMLFHMSPV 115
Query: 691 -RNASGKIAFYAGVQI 647
G++ + VQ+
Sbjct: 116 FSKEDGRVIHFVAVQV 131
>ref|XP_002315641.1| predicted protein [Populus trichocarpa] gi|222864681|gb|EEF01812.1|
predicted protein [Populus trichocarpa]
Length = 396
Score = 330 bits (845), Expect(2) = e-125
Identities = 170/286 (59%), Positives = 211/286 (73%), Gaps = 2/286 (0%)
Frame = -3
Query: 1802 MELELGLVDQSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNE 1623
ME +L L+++SFNTRYS WV+EAL+E+P NFTITDP ISGHPIVFAS GFLKMSG+ +++
Sbjct: 1 MESQLALIEKSFNTRYSPWVREALEELPHNFTITDPTISGHPIVFASPGFLKMSGFRRDQ 60
Query: 1622 VIGKNGRIFQGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEE 1443
VIG NGR+FQGP+T+R++VMEIREAIR+ER +Q++L NYRKDGTPFWMLF +SPVF+KE+
Sbjct: 61 VIGNNGRMFQGPKTNRKTVMEIREAIREERAVQVSLWNYRKDGTPFWMLFQMSPVFSKED 120
Query: 1442 GRVTHFLAVQVPISQKPRINGIASPRNGCYFSEDG--SVLQEIVFGSCRREVCSDSVMES 1269
GRV HF+ VQVPI + R ++DG + EIVFGSCRREVCSDS++E
Sbjct: 121 GRVIHFIGVQVPILRNKR------------STDDGADAAWNEIVFGSCRREVCSDSLVEL 168
Query: 1268 GRVRLLNSYMDAEERVVDAVDSCEASDAEKQKAAKAVNNILSVLRHYSELTSRLVCGRRC 1089
GRV L++Y + R V+ + EASD EKQ+AA +NNILSVL HYSE T RL CG+RC
Sbjct: 169 GRVLALDTYTNC--RGVETEEPWEASDLEKQRAATTINNILSVLTHYSESTGRLACGKRC 226
Query: 1088 CXXXXXXXXXXXXXXXGRIKQSVVLADANLHDMPIVYVSDAFLKMT 951
GRI QS VL D +L +MPIVY SDAFLK+T
Sbjct: 227 SSPAAGLINSSLNISLGRINQSFVLIDPHLPNMPIVYASDAFLKLT 272
Score = 147 bits (372), Expect(2) = e-125
Identities = 74/116 (63%), Positives = 89/116 (76%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y RHEVLG N RFL+G TD V QI+ES+Q E+AC+V LNYRKD TFWNLLH+SP+
Sbjct: 274 YDRHEVLGCNWRFLSGVGTDSSVLNQIQESMQVEQACTVCFLNYRKDKSTFWNLLHMSPV 333
Query: 691 RNASGKIAFYAGVQIKEGCSNGSSEGLSPEMKQLGAVGAIKVAVRCSSMCAGSSKS 524
RNA+GKIA++ GVQ++E C + GLSPE +QL AVGA+KVAVR SM AG SKS
Sbjct: 334 RNATGKIAYFVGVQMEEKCKSQDRHGLSPETRQLSAVGAVKVAVRSLSMGAGCSKS 389
Score = 92.0 bits (227), Expect = 7e-16
Identities = 47/126 (37%), Positives = 75/126 (59%)
Frame = -3
Query: 1787 GLVDQSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNEVIGKN 1608
GL++ S N +L + +F + DP + PIV+AS FLK++GY ++EV+G N
Sbjct: 232 GLINSSLNI--------SLGRINQSFVLIDPHLPNMPIVYASDAFLKLTGYDRHEVLGCN 283
Query: 1607 GRIFQGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEEGRVTH 1428
R G TD + +I+E+++ E+ + LNYRKD + FW L H+SPV N G++ +
Sbjct: 284 WRFLSGVGTDSSVLNQIQESMQVEQACTVCFLNYRKDKSTFWNLLHMSPVRN-ATGKIAY 342
Query: 1427 FLAVQV 1410
F+ VQ+
Sbjct: 343 FVGVQM 348
Score = 68.6 bits (166), Expect = 8e-09
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
+ R +V+G N R GP T+ K +IRE+I+ ERA V + NYRKDG FW L +SP+
Sbjct: 56 FRRDQVIGNNGRMFQGPKTNRKTVMEIREAIREERAVQVSLWNYRKDGTPFWMLFQMSPV 115
Query: 691 -RNASGKIAFYAGVQI 647
G++ + GVQ+
Sbjct: 116 FSKEDGRVIHFIGVQV 131
>ref|NP_001234816.1| LOV/LOV protein [Solanum lycopersicum] gi|311692316|dbj|BAJ24889.1|
LOV/LOV protein [Solanum lycopersicum]
Length = 398
Score = 328 bits (840), Expect(2) = e-121
Identities = 170/285 (59%), Positives = 209/285 (73%), Gaps = 2/285 (0%)
Frame = -3
Query: 1802 MELELGLVDQSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNE 1623
ME +LGL+++SFN +YS+ V+EALDE+PD+FTITDP ISGHPIV+ S GFLK+ GYSKNE
Sbjct: 1 MESQLGLIEKSFNVKYSDGVREALDELPDSFTITDPSISGHPIVYVSRGFLKVFGYSKNE 60
Query: 1622 VIGKNGRIFQGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEE 1443
V+GKNGR+FQGP+T+RRSVM IREAIR+ER IQI+LLNYRKDGTPFWMLF++ PV+++++
Sbjct: 61 VLGKNGRVFQGPKTNRRSVMAIREAIREERGIQISLLNYRKDGTPFWMLFNMCPVYSEKD 120
Query: 1442 GRVTHFLAVQVPISQKPRINGIASPRNG--CYFSEDGSVLQEIVFGSCRREVCSDSVMES 1269
GRV HFL +QVPI ++ G RNG CY DG + V+ CRREVCS+S+ME
Sbjct: 121 GRVVHFLGIQVPILRRRNSLGGGIGRNGGVCY---DGGNCRGYVYKCCRREVCSNSMMEM 177
Query: 1268 GRVRLLNSYMDAEERVVDAVDSCEASDAEKQKAAKAVNNILSVLRHYSELTSRLVCGRRC 1089
R ++S + VD CEASD EK KA+ AVNNI+SVL +YSEL RLV RRC
Sbjct: 178 DRALSVDSVSGLDHTEVDVEGPCEASDQEKTKASVAVNNIMSVLANYSELNGRLVIDRRC 237
Query: 1088 CXXXXXXXXXXXXXXXGRIKQSVVLADANLHDMPIVYVSDAFLKM 954
C GRIKQS VL DA+L DMPIVY SDAFLK+
Sbjct: 238 CQSGTSLLSASLNISFGRIKQSFVLTDAHLPDMPIVYASDAFLKL 282
Score = 136 bits (342), Expect(2) = e-121
Identities = 63/114 (55%), Positives = 86/114 (75%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y RHEVLG+NCRFL+G DT+ + QI++ IQ+E+ C+V ILNYRKDG +FWN LH+SPI
Sbjct: 285 YLRHEVLGRNCRFLSGEDTERGTQFQIKQCIQNEQPCTVHILNYRKDGTSFWNFLHISPI 344
Query: 691 RNASGKIAFYAGVQIKEGCSNGSSEGLSPEMKQLGAVGAIKVAVRCSSMCAGSS 530
R+ASGK+A++ G+QI++ +GL+PEM+ V A+KVAVR SM A +S
Sbjct: 345 RSASGKVAYFVGIQIEDTTEAREKQGLNPEMRHRSVVAAVKVAVRGWSMGASTS 398
Score = 96.3 bits (238), Expect = 4e-17
Identities = 45/129 (34%), Positives = 78/129 (60%)
Frame = -3
Query: 1775 QSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNEVIGKNGRIF 1596
QS + S + + + +F +TD + PIV+AS FLK+ GY ++EV+G+N R
Sbjct: 239 QSGTSLLSASLNISFGRIKQSFVLTDAHLPDMPIVYASDAFLKLIGYLRHEVLGRNCRFL 298
Query: 1595 QGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEEGRVTHFLAV 1416
G T+R + +I++ I++E+ +++LNYRKDGT FW H+SP+ G+V +F+ +
Sbjct: 299 SGEDTERGTQFQIKQCIQNEQPCTVHILNYRKDGTSFWNFLHISPI-RSASGKVAYFVGI 357
Query: 1415 QVPISQKPR 1389
Q+ + + R
Sbjct: 358 QIEDTTEAR 366
Score = 68.2 bits (165), Expect = 1e-08
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y+++EVLG+N R GP T+ + IRE+I+ ER + +LNYRKDG FW L ++ P+
Sbjct: 56 YSKNEVLGKNGRVFQGPKTNRRSVMAIREAIREERGIQISLLNYRKDGTPFWMLFNMCPV 115
Query: 691 -RNASGKIAFYAGVQI 647
G++ + G+Q+
Sbjct: 116 YSEKDGRVVHFLGIQV 131
>ref|XP_002312647.1| predicted protein [Populus trichocarpa] gi|222852467|gb|EEE90014.1|
predicted protein [Populus trichocarpa]
Length = 396
Score = 309 bits (792), Expect(2) = e-119
Identities = 161/286 (56%), Positives = 205/286 (71%), Gaps = 2/286 (0%)
Frame = -3
Query: 1802 MELELGLVDQSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNE 1623
ME +L ++QS N RYS WV+E LDE+ NFTITDP I+GHPIVFAS GFLKMSG+S+ +
Sbjct: 1 MESQLAPIEQSLNARYSLWVREDLDELRHNFTITDPNITGHPIVFASPGFLKMSGFSREQ 60
Query: 1622 VIGKNGRIFQGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEE 1443
V+G NGRIFQGP+T+R++VMEIREAIR+ER +++ LLNYRKDGTPFWMLF +SPVF+KE+
Sbjct: 61 VVGNNGRIFQGPKTNRKTVMEIREAIREERAVRVRLLNYRKDGTPFWMLFQMSPVFSKED 120
Query: 1442 GRVTHFLAVQVPISQKPRINGIASPRNGCYFSEDG--SVLQEIVFGSCRREVCSDSVMES 1269
G V HF+ VQVPI + ++ ++DG + EI FGSCRREVCSDS++E
Sbjct: 121 GGVVHFIGVQVPIRRNKKL------------TDDGADAACNEIAFGSCRREVCSDSLVEL 168
Query: 1268 GRVRLLNSYMDAEERVVDAVDSCEASDAEKQKAAKAVNNILSVLRHYSELTSRLVCGRRC 1089
RV L++ D + V +SCEAS+ EKQ+AA A+N+ILSVL SE T R+VCG+RC
Sbjct: 169 TRVLALDT--DTNCKGVKIEESCEASELEKQRAATAINDILSVLTGCSESTGRMVCGKRC 226
Query: 1088 CXXXXXXXXXXXXXXXGRIKQSVVLADANLHDMPIVYVSDAFLKMT 951
GRIKQS VL D +L +MP+VY SDAFLK+T
Sbjct: 227 SLPAAGLINSSLNISLGRIKQSFVLIDPHLPNMPVVYASDAFLKLT 272
Score = 149 bits (375), Expect(2) = e-119
Identities = 71/116 (61%), Positives = 91/116 (78%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y RHEVLG++ FLNG DTD + Q++ESIQ E+ C+V ILNYRKD TFWNLLH+SP+
Sbjct: 274 YDRHEVLGRDWNFLNGVDTDSSILHQVQESIQVEQPCTVCILNYRKDKSTFWNLLHMSPV 333
Query: 691 RNASGKIAFYAGVQIKEGCSNGSSEGLSPEMKQLGAVGAIKVAVRCSSMCAGSSKS 524
RNA+GKIA++ GVQ++E C + GLSPE++QLGAVGA+KVAVR S+ A S+S
Sbjct: 334 RNATGKIAYFVGVQMEEKCKSQDRRGLSPEIRQLGAVGAVKVAVRSLSISASCSRS 389
Score = 91.3 bits (225), Expect = 1e-15
Identities = 44/126 (34%), Positives = 76/126 (60%)
Frame = -3
Query: 1787 GLVDQSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNEVIGKN 1608
GL++ S N +L + +F + DP + P+V+AS FLK++GY ++EV+G++
Sbjct: 232 GLINSSLNI--------SLGRIKQSFVLIDPHLPNMPVVYASDAFLKLTGYDRHEVLGRD 283
Query: 1607 GRIFQGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEEGRVTH 1428
G TD + +++E+I+ E+ + +LNYRKD + FW L H+SPV N G++ +
Sbjct: 284 WNFLNGVDTDSSILHQVQESIQVEQPCTVCILNYRKDKSTFWNLLHMSPVRN-ATGKIAY 342
Query: 1427 FLAVQV 1410
F+ VQ+
Sbjct: 343 FVGVQM 348
Score = 72.4 bits (176), Expect = 6e-10
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
++R +V+G N R GP T+ K +IRE+I+ ERA VR+LNYRKDG FW L +SP+
Sbjct: 56 FSREQVVGNNGRIFQGPKTNRKTVMEIREAIREERAVRVRLLNYRKDGTPFWMLFQMSPV 115
Query: 691 -RNASGKIAFYAGVQI 647
G + + GVQ+
Sbjct: 116 FSKEDGGVVHFIGVQV 131
>ref|XP_003517926.1| PREDICTED: protein TWIN LOV 1-like [Glycine max]
Length = 388
Score = 296 bits (757), Expect(2) = e-114
Identities = 152/286 (53%), Positives = 195/286 (68%), Gaps = 2/286 (0%)
Frame = -3
Query: 1802 MELELG--LVDQSFNTRYSNWVKEALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSK 1629
MELELG + +SFNTRY+ +++LDE+PD+FTITDP I GHPIVFAS GFLK++GY+
Sbjct: 3 MELELGSTTIQRSFNTRYTRHARDSLDELPDSFTITDPSIPGHPIVFASPGFLKLTGYAA 62
Query: 1628 NEVIGKNGRIFQGPRTDRRSVMEIREAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNK 1449
EV+G+ IFQGPRT R+SV+EIREA+R+ER Q+ LLNYRKDGTPFWMLF + PVF+
Sbjct: 63 REVLGRPAAIFQGPRTSRKSVIEIREAVREERNAQVVLLNYRKDGTPFWMLFRVCPVFSS 122
Query: 1448 EEGRVTHFLAVQVPISQKPRINGIASPRNGCYFSEDGSVLQEIVFGSCRREVCSDSVMES 1269
+ G V HF+AVQVP+ +K +GS +++ FG CR+EVC+DS+ E
Sbjct: 123 DGGAVVHFVAVQVPLQKK-----------------EGSGVRDFGFGCCRKEVCADSLAEI 165
Query: 1268 GRVRLLNSYMDAEERVVDAVDSCEASDAEKQKAAKAVNNILSVLRHYSELTSRLVCGRRC 1089
GRV L ++ + R ++ + CEASD EK+ A A++NI SVL HYSE T RLVC +RC
Sbjct: 166 GRVCSLEQVLEPDVRELEREEPCEASDEEKRSAVNAMDNIFSVLTHYSEATGRLVCQKRC 225
Query: 1088 CXXXXXXXXXXXXXXXGRIKQSVVLADANLHDMPIVYVSDAFLKMT 951
GRIKQS VL + L DMPIVY SDAFLK+T
Sbjct: 226 SIPDVGLLSTSLIISLGRIKQSFVLTNPRLSDMPIVYASDAFLKLT 271
Score = 145 bits (365), Expect(2) = e-114
Identities = 69/116 (59%), Positives = 87/116 (75%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y ++EVLG+NCRFL G DTD IRESI++E+ C+VRILNYRKD +FWN LH+SP+
Sbjct: 273 YAKNEVLGRNCRFLGGTDTDTSTLHLIRESIKTEQPCTVRILNYRKDKSSFWNFLHISPV 332
Query: 691 RNASGKIAFYAGVQIKEGCSNGSSEGLSPEMKQLGAVGAIKVAVRCSSMCAGSSKS 524
R+ASGK+A++ GVQI++ N S LSPE +QL VG +KVAVR SM GSSKS
Sbjct: 333 RDASGKVAYFVGVQIEDSNKNDDSHCLSPEKRQLNVVGVVKVAVRSLSMTVGSSKS 388
Score = 102 bits (255), Expect = 4e-19
Identities = 51/123 (41%), Positives = 77/123 (62%)
Frame = -3
Query: 1736 ALDEVPDNFTITDPCISGHPIVFASSGFLKMSGYSKNEVIGKNGRIFQGPRTDRRSVMEI 1557
+L + +F +T+P +S PIV+AS FLK++GY+KNEV+G+N R G TD ++ I
Sbjct: 240 SLGRIKQSFVLTNPRLSDMPIVYASDAFLKLTGYAKNEVLGRNCRFLGGTDTDTSTLHLI 299
Query: 1556 REAIRDERTIQINLLNYRKDGTPFWMLFHLSPVFNKEEGRVTHFLAVQVPISQKPRINGI 1377
RE+I+ E+ + +LNYRKD + FW H+SPV G+V +F+ VQ+ S K +
Sbjct: 300 RESIKTEQPCTVRILNYRKDKSSFWNFLHISPV-RDASGKVAYFVGVQIEDSNKNDDSHC 358
Query: 1376 ASP 1368
SP
Sbjct: 359 LSP 361
Score = 60.1 bits (144), Expect = 3e-06
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = -1
Query: 871 YTRHEVLGQNCRFLNGPDTDVKVKCQIRESIQSERACSVRILNYRKDGCTFWNLLHLSPI 692
Y EVLG+ GP T K +IRE+++ ER V +LNYRKDG FW L + P+
Sbjct: 60 YAAREVLGRPAAIFQGPRTSRKSVIEIREAVREERNAQVVLLNYRKDGTPFWMLFRVCPV 119
Query: 691 RNA-SGKIAFYAGVQI----KEG 638
++ G + + VQ+ KEG
Sbjct: 120 FSSDGGAVVHFVAVQVPLQKKEG 142