BLASTX nr result

ID: Coptis23_contig00002320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002320
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis ...   120   1e-25
emb|CBI26898.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002526027.1| Prolactin regulatory element-binding protein...   119   3e-25
ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycin...   115   3e-24
ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24

>ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis vinifera]
          Length = 394

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/86 (62%), Positives = 67/86 (77%)
 Frame = +2

Query: 2   HATVKDLSFSSDGKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGSCRFSQTKDNTQ 181
           HATVKD  FS DGK+LVSLGSG   RVWD++SS  +ASLPKENDE+F  CRFSQT    Q
Sbjct: 198 HATVKDFDFSPDGKFLVSLGSGGPGRVWDLTSSTAIASLPKENDEVFAFCRFSQTNVKNQ 257

Query: 182 ILYITAMRGQGGSIIYWDTTSWKRIG 259
           +LYI A+R +G  I+ W+TT+WK++G
Sbjct: 258 VLYIAAVRDRGACIVTWNTTTWKKVG 283


>emb|CBI26898.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/86 (62%), Positives = 67/86 (77%)
 Frame = +2

Query: 2   HATVKDLSFSSDGKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGSCRFSQTKDNTQ 181
           HATVKD  FS DGK+LVSLGSG   RVWD++SS  +ASLPKENDE+F  CRFSQT    Q
Sbjct: 106 HATVKDFDFSPDGKFLVSLGSGGPGRVWDLTSSTAIASLPKENDEVFAFCRFSQTNVKNQ 165

Query: 182 ILYITAMRGQGGSIIYWDTTSWKRIG 259
           +LYI A+R +G  I+ W+TT+WK++G
Sbjct: 166 VLYIAAVRDRGACIVTWNTTTWKKVG 191


>ref|XP_002526027.1| Prolactin regulatory element-binding protein, putative [Ricinus
           communis] gi|223534674|gb|EEF36367.1| Prolactin
           regulatory element-binding protein, putative [Ricinus
           communis]
          Length = 390

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/86 (65%), Positives = 66/86 (76%)
 Frame = +2

Query: 2   HATVKDLSFSSDGKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGSCRFSQTKDNTQ 181
           H ++KDL FS DGK+LVSLG     RVWDV+SS  VASL KENDE+F SCRFSQT D TQ
Sbjct: 191 HPSLKDLCFSPDGKFLVSLGGRGPGRVWDVTSSTAVASLSKENDEVFASCRFSQTTDQTQ 250

Query: 182 ILYITAMRGQGGSIIYWDTTSWKRIG 259
           +LYI A+  +GGSI+ WD +SW RIG
Sbjct: 251 VLYIAAITDKGGSIVTWDASSWNRIG 276


>ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycine max]
          Length = 400

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/85 (62%), Positives = 66/85 (77%)
 Frame = +2

Query: 2   HATVKDLSFSSDGKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGSCRFSQTKDNTQ 181
           H+++KDL FSSDGK L SLGSG  C+VWDVSSS +++SL  EN E F SCRFSQT D T 
Sbjct: 205 HSSLKDLHFSSDGKLLASLGSGGPCKVWDVSSSMVLSSLSNENRETFSSCRFSQTNDETL 264

Query: 182 ILYITAMRGQGGSIIYWDTTSWKRI 256
           ILYI AM  +GGSI+ W+T +W+R+
Sbjct: 265 ILYIAAMTDKGGSILTWNTQTWERM 289


>ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|222863844|gb|EEF00975.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/85 (62%), Positives = 66/85 (77%)
 Frame = +2

Query: 2   HATVKDLSFSSDGKYLVSLGSGSSCRVWDVSSSKIVASLPKENDEMFGSCRFSQTKDNTQ 181
           HA++KDL FS DGK+LVS+G     RVWDV+SS  VASLPKENDE+F SCRFSQ  D  Q
Sbjct: 206 HASLKDLCFSPDGKFLVSMGQRDLGRVWDVTSSTAVASLPKENDEIFASCRFSQRSDQAQ 265

Query: 182 ILYITAMRGQGGSIIYWDTTSWKRI 256
           +LYI A+  +G SI+ W+T+SWKR+
Sbjct: 266 VLYIAAITDKGSSIVTWNTSSWKRM 290


Top