BLASTX nr result

ID: Coptis23_contig00002319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002319
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26414.3| unnamed protein product [Vitis vinifera]              185   4e-45
ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...   185   4e-45
ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thali...   180   1e-43
ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arab...   180   1e-43

>emb|CBI26414.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/100 (92%), Positives = 98/100 (98%)
 Frame = +3

Query: 3   AIAVQSPYVAQVQLLRERLDDLPEAIGVEVATVDSFQGREADAVIMSMVRSNTLGAVGFL 182
           AIAVQSPYVAQVQLLR+RLD++PEA+GVEVAT+DSFQGREADAVI+SMVRSNTLGAVGFL
Sbjct: 662 AIAVQSPYVAQVQLLRDRLDEIPEAVGVEVATIDSFQGREADAVIISMVRSNTLGAVGFL 721

Query: 183 GDSRRMNVAITRARKHVTVVCDSSTICHNTFLARLLRHTR 302
           GDSRRMNVAITRARKHV VVCDSSTICHNTFLARLLRH R
Sbjct: 722 GDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 761


>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/100 (92%), Positives = 98/100 (98%)
 Frame = +3

Query: 3    AIAVQSPYVAQVQLLRERLDDLPEAIGVEVATVDSFQGREADAVIMSMVRSNTLGAVGFL 182
            AIAVQSPYVAQVQLLR+RLD++PEA+GVEVAT+DSFQGREADAVI+SMVRSNTLGAVGFL
Sbjct: 826  AIAVQSPYVAQVQLLRDRLDEIPEAVGVEVATIDSFQGREADAVIISMVRSNTLGAVGFL 885

Query: 183  GDSRRMNVAITRARKHVTVVCDSSTICHNTFLARLLRHTR 302
            GDSRRMNVAITRARKHV VVCDSSTICHNTFLARLLRH R
Sbjct: 886  GDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 925


>ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|222857607|gb|EEE95154.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  181 bits (458), Expect = 7e-44
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = +3

Query: 3   AIAVQSPYVAQVQLLRERLDDLPEAIGVEVATVDSFQGREADAVIMSMVRSNTLGAVGFL 182
           AIAVQSPYVAQVQLLRERLD+LPEA GVE+AT+DSFQGREADAVI+SMVRSNTLGAVGFL
Sbjct: 661 AIAVQSPYVAQVQLLRERLDELPEADGVEIATIDSFQGREADAVIISMVRSNTLGAVGFL 720

Query: 183 GDSRRMNVAITRARKHVTVVCDSSTICHNTFLARLLRHTR 302
           GDS+R NVAITRARKHV VVCDSSTICHNTFLARLLRH R
Sbjct: 721 GDSKRTNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 760


>ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana]
            gi|332006651|gb|AED94034.1| putative DNA-binding protein
            [Arabidopsis thaliana]
          Length = 961

 Score =  180 bits (456), Expect = 1e-43
 Identities = 92/100 (92%), Positives = 94/100 (94%)
 Frame = +3

Query: 3    AIAVQSPYVAQVQLLRERLDDLPEAIGVEVATVDSFQGREADAVIMSMVRSNTLGAVGFL 182
            AIAVQSPYVAQVQLLRERLDD P A GVEVAT+DSFQGREADAVI+SMVRSN LGAVGFL
Sbjct: 834  AIAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFL 893

Query: 183  GDSRRMNVAITRARKHVTVVCDSSTICHNTFLARLLRHTR 302
            GDSRRMNVAITRARKHV VVCDSSTICHNTFLARLLRH R
Sbjct: 894  GDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 933


>ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
            lyrata] gi|297316296|gb|EFH46719.1| hypothetical protein
            ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata]
          Length = 979

 Score =  180 bits (456), Expect = 1e-43
 Identities = 92/100 (92%), Positives = 94/100 (94%)
 Frame = +3

Query: 3    AIAVQSPYVAQVQLLRERLDDLPEAIGVEVATVDSFQGREADAVIMSMVRSNTLGAVGFL 182
            AIAVQSPYVAQVQLLRERLDD P A GVEVAT+DSFQGREADAVI+SMVRSN LGAVGFL
Sbjct: 852  AIAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFL 911

Query: 183  GDSRRMNVAITRARKHVTVVCDSSTICHNTFLARLLRHTR 302
            GDSRRMNVAITRARKHV VVCDSSTICHNTFLARLLRH R
Sbjct: 912  GDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 951


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