BLASTX nr result

ID: Coptis23_contig00002298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002298
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35670.3| unnamed protein product [Vitis vinifera]              194   6e-48
ref|XP_002512660.1| conserved hypothetical protein [Ricinus comm...   181   5e-44
ref|XP_002267301.1| PREDICTED: uncharacterized protein LOC100257...   179   2e-43
gb|AAK27813.1|AC022457_16 hypothetical protein [Oryza sativa Jap...   167   6e-40
ref|XP_002304643.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>emb|CBI35670.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  194 bits (493), Expect = 6e-48
 Identities = 97/139 (69%), Positives = 109/139 (78%)
 Frame = -2

Query: 510 FHLHQKFPAAVIVDDFGDFFNESTCQERYGNQRGRDLAIVRTLALCQNAITHANERLELE 331
           FHLH KFP AVI+DDFGDFF+E TCQERY + RGRDLA+VRTLALC++AI HAN+     
Sbjct: 102 FHLHHKFPVAVIIDDFGDFFDERTCQERYNSPRGRDLAMVRTLALCRSAILHANKTA--- 158

Query: 330 LQFPCKLLLSDTQHGDTPRLLFIYKRWITSIFTIKGDGMGSFLLRNNTTSSSQGESGGKE 151
              PCK+LLSDT HGD+PRLLFIYKRWI SIFTIKGDG GSFLL N   S S G SG + 
Sbjct: 159 ---PCKVLLSDTHHGDSPRLLFIYKRWIPSIFTIKGDGSGSFLLTNGINSGS-GSSGRRR 214

Query: 150 AAKYSIALQYLVLEDFLDE 94
            AKYSIALQYL LED  ++
Sbjct: 215 TAKYSIALQYLFLEDVTED 233


>ref|XP_002512660.1| conserved hypothetical protein [Ricinus communis]
           gi|223548621|gb|EEF50112.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/141 (62%), Positives = 109/141 (77%)
 Frame = -2

Query: 510 FHLHQKFPAAVIVDDFGDFFNESTCQERYGNQRGRDLAIVRTLALCQNAITHANERLELE 331
           FH++  FP+AVI+DDFGDFFN+ +CQERY N RGRDLA+VR LALC NA+ HANE+    
Sbjct: 103 FHMYDAFPSAVIIDDFGDFFNQRSCQERYENPRGRDLAMVRILALCHNAVMHANEKGH-- 160

Query: 330 LQFPCKLLLSDTQHGDTPRLLFIYKRWITSIFTIKGDGMGSFLLRNNTTSSSQGESGGKE 151
               CKLLLSDT HGD+PRLLFIYKRW+++IFTIKGDG GSFLLR N+  +S+  S    
Sbjct: 161 ----CKLLLSDTHHGDSPRLLFIYKRWVSAIFTIKGDGQGSFLLRRNSNLASE-NSERSR 215

Query: 150 AAKYSIALQYLVLEDFLDEAE 88
           +AKYS+ALQ+L LE   ++ E
Sbjct: 216 SAKYSVALQFLYLERIFEDDE 236


>ref|XP_002267301.1| PREDICTED: uncharacterized protein LOC100257492 [Vitis vinifera]
          Length = 231

 Score =  179 bits (454), Expect = 2e-43
 Identities = 93/139 (66%), Positives = 105/139 (75%)
 Frame = -2

Query: 510 FHLHQKFPAAVIVDDFGDFFNESTCQERYGNQRGRDLAIVRTLALCQNAITHANERLELE 331
           FHLH KFP AVI+DDFGDFF+E     RY + RGRDLA+VRTLALC++AI HAN+     
Sbjct: 102 FHLHHKFPVAVIIDDFGDFFDE-----RYNSPRGRDLAMVRTLALCRSAILHANKTA--- 153

Query: 330 LQFPCKLLLSDTQHGDTPRLLFIYKRWITSIFTIKGDGMGSFLLRNNTTSSSQGESGGKE 151
              PCK+LLSDT HGD+PRLLFIYKRWI SIFTIKGDG GSFLL N   S S G SG + 
Sbjct: 154 ---PCKVLLSDTHHGDSPRLLFIYKRWIPSIFTIKGDGSGSFLLTNGINSGS-GSSGRRR 209

Query: 150 AAKYSIALQYLVLEDFLDE 94
            AKYSIALQYL LED  ++
Sbjct: 210 TAKYSIALQYLFLEDVTED 228


>gb|AAK27813.1|AC022457_16 hypothetical protein [Oryza sativa Japonica Group]
          Length = 187

 Score =  167 bits (424), Expect = 6e-40
 Identities = 84/134 (62%), Positives = 102/134 (76%)
 Frame = -2

Query: 510 FHLHQKFPAAVIVDDFGDFFNESTCQERYGNQRGRDLAIVRTLALCQNAITHANERLELE 331
           FHL   FPAAVI+DDF DFF+E +CQ+RYGN R RDLA+VR LALCQNA+ HAN +  L 
Sbjct: 53  FHLLGSFPAAVIIDDFADFFSERSCQQRYGNARARDLAVVRILALCQNAVAHANTK--LG 110

Query: 330 LQFPCKLLLSDTQHGDTPRLLFIYKRWITSIFTIKGDGMGSFLLRNNTTSSSQGESGGKE 151
           +   C LLLSD   GDTPR +FIYKRWI+SI+TI+GDG GS++L++ ++S      G   
Sbjct: 111 VPGSCNLLLSDVHQGDTPRSMFIYKRWISSIYTIQGDGHGSYILKSISSSDCGSREG--R 168

Query: 150 AAKYSIALQYLVLE 109
           AAKYSIALQYLVLE
Sbjct: 169 AAKYSIALQYLVLE 182


>ref|XP_002304643.1| predicted protein [Populus trichocarpa] gi|222842075|gb|EEE79622.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  166 bits (419), Expect = 2e-39
 Identities = 82/141 (58%), Positives = 101/141 (71%)
 Frame = -2

Query: 510 FHLHQKFPAAVIVDDFGDFFNESTCQERYGNQRGRDLAIVRTLALCQNAITHANERLELE 331
           FHLH  FP +V+VDDFGDFF E  CQERYGN RGRDLA+VR LALC NA+  +N++    
Sbjct: 109 FHLHDTFPLSVVVDDFGDFFYERKCQERYGNPRGRDLALVRILALCHNAVMSSNDKGH-- 166

Query: 330 LQFPCKLLLSDTQHGDTPRLLFIYKRWITSIFTIKGDGMGSFLLRNNTTSSSQGESGGKE 151
               CKLL+SDT HGD+PRLLF+YKRW+ SIFTIKGDG GSFLL++ +   S      K 
Sbjct: 167 ----CKLLISDTHHGDSPRLLFLYKRWVPSIFTIKGDGNGSFLLKSYSNVGSDSTEKMK- 221

Query: 150 AAKYSIALQYLVLEDFLDEAE 88
            AKYS+  Q L+LE  +++ E
Sbjct: 222 IAKYSLVYQRLLLEGIIEDEE 242


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