BLASTX nr result

ID: Coptis23_contig00002289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002289
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043048.1| Os01g0369000 [Oryza sativa Japonica Group] g...    57   2e-06
dbj|BAB64762.1| cullin-like protein [Oryza sativa Japonica Group...    57   2e-06
gb|ACS69068.1| CULLIN1-like protein 1 [Lilium longiflorum]             57   2e-06
ref|XP_002455628.1| hypothetical protein SORBIDRAFT_03g015000 [S...    57   2e-06
gb|AAK53839.1|AC011806_16 Putative cullin [Oryza sativa]               57   2e-06

>ref|NP_001043048.1| Os01g0369000 [Oryza sativa Japonica Group]
           gi|54290813|dbj|BAD61452.1| CUL1 [Oryza sativa Japonica
           Group] gi|113532579|dbj|BAF04962.1| Os01g0369000 [Oryza
           sativa Japonica Group] gi|215694294|dbj|BAG89287.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|215737477|dbj|BAG96607.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618449|gb|EEE54581.1| hypothetical protein
           OsJ_01786 [Oryza sativa Japonica Group]
          Length = 744

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +2

Query: 266 RKIIGLEEGWEFMEKGITKLKRIFEGHPEPQF 361
           RK I LE+GWEFM+KGITKLK I EG PEPQF
Sbjct: 6   RKTIDLEQGWEFMQKGITKLKNILEGKPEPQF 37


>dbj|BAB64762.1| cullin-like protein [Oryza sativa Japonica Group]
           gi|33243052|gb|AAQ01196.1| CUL1 [Oryza sativa Japonica
           Group]
          Length = 732

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +2

Query: 266 RKIIGLEEGWEFMEKGITKLKRIFEGHPEPQF 361
           RK I LE+GWEFM+KGITKLK I EG PEPQF
Sbjct: 6   RKTIDLEQGWEFMQKGITKLKNILEGKPEPQF 37


>gb|ACS69068.1| CULLIN1-like protein 1 [Lilium longiflorum]
          Length = 744

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 266 RKIIGLEEGWEFMEKGITKLKRIFEGHPEPQF 361
           RK I LE+GWEFM+KGITKLK+I EG PEPQF
Sbjct: 6   RKTIDLEQGWEFMQKGITKLKKILEGLPEPQF 37


>ref|XP_002455628.1| hypothetical protein SORBIDRAFT_03g015000 [Sorghum bicolor]
           gi|241927603|gb|EES00748.1| hypothetical protein
           SORBIDRAFT_03g015000 [Sorghum bicolor]
          Length = 744

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +2

Query: 266 RKIIGLEEGWEFMEKGITKLKRIFEGHPEPQF 361
           RK I LE+GWEFM+KGITKLK I EG PEPQF
Sbjct: 6   RKTIDLEQGWEFMQKGITKLKNILEGKPEPQF 37


>gb|AAK53839.1|AC011806_16 Putative cullin [Oryza sativa]
          Length = 750

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +2

Query: 266 RKIIGLEEGWEFMEKGITKLKRIFEGHPEPQF 361
           RK I LE+GWEFM+KGITKLK I EG PEPQF
Sbjct: 6   RKTIDLEQGWEFMQKGITKLKNILEGKPEPQF 37


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