BLASTX nr result

ID: Coptis23_contig00002285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002285
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34585.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_002280182.1| PREDICTED: embryogenesis-associated protein ...    96   4e-18
ref|XP_003539999.1| PREDICTED: embryogenesis-associated protein ...    94   1e-17
ref|XP_002303690.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
gb|AAM65108.1| putative LEA protein [Arabidopsis thaliana]             88   8e-16

>emb|CBI34585.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = -3

Query: 369 QDNPNCVLVVTPKGGHLGWVAGDEAPLGAPWTDTLVMEFLEHLESGRTKDLESSSASGHT 190
           ++NPNC+L+VTPKGGHLGWV+G EAP GAPWTD +VM+FLEHLE GR K + SSS S   
Sbjct: 314 KENPNCLLIVTPKGGHLGWVSGPEAPRGAPWTDPVVMDFLEHLERGRPKVIASSSESDTV 373

Query: 189 LISSTG 172
            + + G
Sbjct: 374 QLCTEG 379


>ref|XP_002280182.1| PREDICTED: embryogenesis-associated protein EMB8 [Vitis vinifera]
          Length = 424

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = -3

Query: 369 QDNPNCVLVVTPKGGHLGWVAGDEAPLGAPWTDTLVMEFLEHLESGRTKDLESSSASGHT 190
           ++NPNC+L+VTPKGGHLGWV+G EAP GAPWTD +VM+FLEHLE GR K + SSS S   
Sbjct: 352 KENPNCLLIVTPKGGHLGWVSGPEAPRGAPWTDPVVMDFLEHLERGRPKVIASSSESDTV 411

Query: 189 LISSTG 172
            + + G
Sbjct: 412 QLCTEG 417


>ref|XP_003539999.1| PREDICTED: embryogenesis-associated protein EMB8-like [Glycine max]
          Length = 412

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = -3

Query: 369 QDNPNCVLVVTPKGGHLGWVAGDEAPLGAPWTDTLVMEFLEHLESGRTKDLESSSASG 196
           ++NPNC+L+VTPKGGHLGWVAGDEAPLGAPWTD LVM+F+++LES   K  E++S  G
Sbjct: 345 EENPNCLLIVTPKGGHLGWVAGDEAPLGAPWTDPLVMDFIQYLESEAVKTPETNSNPG 402


>ref|XP_002303690.1| predicted protein [Populus trichocarpa] gi|222841122|gb|EEE78669.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = -3

Query: 369 QDNPNCVLVVTPKGGHLGWVAGDEAPLGAPWTDTLVMEFLEHLESGRTKDLESSSAS 199
           ++NPNC+L+VTPKGGHLGW+AG EAPLGAPWTDT+VM+FLE+L+SG  +   S S +
Sbjct: 310 KENPNCLLIVTPKGGHLGWIAGSEAPLGAPWTDTIVMDFLEYLQSGACEAPASHSGT 366


>gb|AAM65108.1| putative LEA protein [Arabidopsis thaliana]
          Length = 408

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = -3

Query: 369 QDNPNCVLVVTPKGGHLGWVAGDEAPLGAPWTDTLVMEFLEHLESGRTKDLESSSASGHT 190
           + NPNCVL+VTP+GGHLGWVAG+EAP GAPWTD +VMEFL+H+E+  T + E S    H 
Sbjct: 345 KSNPNCVLIVTPRGGHLGWVAGEEAPNGAPWTDQVVMEFLQHVENRETINGERSFEDVHD 404

Query: 189 LI 184
            I
Sbjct: 405 QI 406


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