BLASTX nr result
ID: Coptis23_contig00002267
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00002267 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314126.1| predicted protein [Populus trichocarpa] gi|2... 78 6e-13 ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246... 77 1e-12 emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera] 77 1e-12 gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indi... 76 2e-12 gb|ABF95136.1| RNA recognition motif family protein, expressed [... 76 2e-12 >ref|XP_002314126.1| predicted protein [Populus trichocarpa] gi|222850534|gb|EEE88081.1| predicted protein [Populus trichocarpa] Length = 316 Score = 78.2 bits (191), Expect = 6e-13 Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 11/64 (17%) Frame = +2 Query: 122 VVDPWTRETRGFGFVTMSTVKEAN-----------QGRVITVEKAXXXXXXTPTPGRYVG 268 VVDPWTRE+RGFGFVTMSTV+EA+ +GRVITVEKA TPTPGRY+G Sbjct: 84 VVDPWTRESRGFGFVTMSTVEEADHCIKYLDRSVLEGRVITVEKAKRKRGRTPTPGRYLG 143 Query: 269 LKSI 280 L++I Sbjct: 144 LRTI 147 >ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246735 [Vitis vinifera] Length = 330 Score = 77.0 bits (188), Expect = 1e-12 Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 11/64 (17%) Frame = +2 Query: 122 VVDPWTRETRGFGFVTMSTVKEAN-----------QGRVITVEKAXXXXXXTPTPGRYVG 268 V DPWTRE+RGFGFVTMSTV+EAN +GRVITVEKA TPTPG+Y+G Sbjct: 81 VTDPWTRESRGFGFVTMSTVEEANRCIKYLDRSVLEGRVITVEKARRRRGRTPTPGKYLG 140 Query: 269 LKSI 280 L+++ Sbjct: 141 LRTV 144 >emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera] Length = 241 Score = 77.0 bits (188), Expect = 1e-12 Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 11/64 (17%) Frame = +2 Query: 122 VVDPWTRETRGFGFVTMSTVKEAN-----------QGRVITVEKAXXXXXXTPTPGRYVG 268 V DPWTRE+RGFGFVTMSTV+EAN +GRVITVEKA TPTPG+Y+G Sbjct: 81 VTDPWTRESRGFGFVTMSTVEEANRCIKYLDRSVLEGRVITVEKARRRRGRTPTPGKYLG 140 Query: 269 LKSI 280 L+++ Sbjct: 141 LRTV 144 >gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indica Group] Length = 324 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 11/63 (17%) Frame = +2 Query: 122 VVDPWTRETRGFGFVTMSTVKEAN-----------QGRVITVEKAXXXXXXTPTPGRYVG 268 V+DPWTRE+RGFGFVTM+TVKEA+ +GRVITVEKA TPTPGRY+G Sbjct: 52 VLDPWTRESRGFGFVTMATVKEADLCIKYLDRSVLEGRVITVEKAKRRRGRTPTPGRYLG 111 Query: 269 LKS 277 KS Sbjct: 112 TKS 114 >gb|ABF95136.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] Length = 347 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 11/63 (17%) Frame = +2 Query: 122 VVDPWTRETRGFGFVTMSTVKEAN-----------QGRVITVEKAXXXXXXTPTPGRYVG 268 V+DPWTRE+RGFGFVTM+TVKEA+ +GRVITVEKA TPTPGRY+G Sbjct: 75 VLDPWTRESRGFGFVTMATVKEADLCIKYLDRSVLEGRVITVEKAKRRRGRTPTPGRYLG 134 Query: 269 LKS 277 KS Sbjct: 135 TKS 137