BLASTX nr result

ID: Coptis23_contig00002256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002256
         (1494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22952.3| unnamed protein product [Vitis vinifera]              464   e-128
emb|CAN62467.1| hypothetical protein VITISV_016047 [Vitis vinifera]   462   e-127
ref|XP_002271110.1| PREDICTED: pumilio homolog 24-like [Vitis vi...   458   e-126
ref|XP_002314353.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_002328590.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123

>emb|CBI22952.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  464 bits (1195), Expect = e-128
 Identities = 254/388 (65%), Positives = 296/388 (76%), Gaps = 2/388 (0%)
 Frame = -1

Query: 1494 GLSKASVLRHMASVIQPILEKGIVDHSIIHTAILEFLNIADKFSAADVIEQLSGPLLVRM 1315
            GL K SVLRHM+SVIQPILEKGIVDHSIIH A++E+L+IADK SAA+VI+QLSG LLVRM
Sbjct: 270  GLQKGSVLRHMSSVIQPILEKGIVDHSIIHRALMEYLSIADKSSAAEVIQQLSGALLVRM 329

Query: 1314 IHTKDGSKLGMLCIKHGGAKERXXXXXXXXXXXXKTALDQYGSMVLVCMLSTVDDTKLLT 1135
            IHT+DGS++G+LCIKHG AKER            K A DQ GSMVL  +LSTVDDTKLLT
Sbjct: 330  IHTRDGSRIGLLCIKHGSAKERKKIIKGMKGHIDKIAHDQCGSMVLAYILSTVDDTKLLT 389

Query: 1134 KIVIRELQPILKELVLHKNGRRPLLQLLHPNCQRYLGLEDLAALNLSIPSLRSKGDGNDM 955
            K++IRELQ ILKEL+L KNGRR LLQLLHPNC RY   EDL + NLSIPSL  K + + +
Sbjct: 390  KVIIRELQAILKELLLDKNGRRVLLQLLHPNCSRYFSPEDLVSFNLSIPSLSPKSE-SKV 448

Query: 954  SLDLILLKEPSKDGESSGKDVNIDSEANVVE-DGNIGPEDNIRIEGGGKKDPAVRRLELL 778
            + D +   + SK  ES  ++   D E    E + N  P ++  I  GGKKDP +RR ELL
Sbjct: 449  NPDSVKEAKSSKTKESGDEETKGDLEVTTAEANENTSPSESHHIAEGGKKDPNLRRQELL 508

Query: 777  VNSGLAESLMDTCIASVEELIRSQFGKEVVYEVATGGAGAILQQTLADKMKDLHKAIASL 598
            V+SGLAE+L+DTCI S  EL+RS FGKEV+YEVATGGAG IL+  L +K+  LH AIASL
Sbjct: 509  VDSGLAENLIDTCIESAGELLRSNFGKEVMYEVATGGAGGILRPALDEKLDALHGAIASL 568

Query: 597  AALPKTEES-EEHVLESFHSSRTIRKLVLDCPVFASILWKKALKGKCETLAQGHSCKVVA 421
            AA PK+EES EEHVLE+FHSSRTIRKLVLDCP FAS LWK AL GKCE  AQGHS KVV 
Sbjct: 569  AAQPKSEESEEEHVLENFHSSRTIRKLVLDCPTFASTLWKIALGGKCEMWAQGHSHKVVL 628

Query: 420  AFLESSDSNVRDMALPELQPLIDGGVLK 337
            AFLE+SDS V ++A  ELQPLID G+LK
Sbjct: 629  AFLEASDSEVCELAKGELQPLIDSGILK 656


>emb|CAN62467.1| hypothetical protein VITISV_016047 [Vitis vinifera]
          Length = 662

 Score =  462 bits (1189), Expect = e-127
 Identities = 253/388 (65%), Positives = 295/388 (76%), Gaps = 2/388 (0%)
 Frame = -1

Query: 1494 GLSKASVLRHMASVIQPILEKGIVDHSIIHTAILEFLNIADKFSAADVIEQLSGPLLVRM 1315
            GL K SVLRHM+SVIQPILEKGIVDHSIIH A++E+L+IADK SAA+VI+QLSG LLVRM
Sbjct: 270  GLQKGSVLRHMSSVIQPILEKGIVDHSIIHRALMEYLSIADKSSAAEVIQQLSGALLVRM 329

Query: 1314 IHTKDGSKLGMLCIKHGGAKERXXXXXXXXXXXXKTALDQYGSMVLVCMLSTVDDTKLLT 1135
            IHT+DGS++G+LCIKHG AKER            K A DQ GSMVL  +LSTVDDTKLLT
Sbjct: 330  IHTRDGSRIGLLCIKHGSAKERKKIIKGMKGHIDKIAHDQCGSMVLAYILSTVDDTKLLT 389

Query: 1134 KIVIRELQPILKELVLHKNGRRPLLQLLHPNCQRYLGLEDLAALNLSIPSLRSKGDGNDM 955
            K++IRELQ ILKEL+L KNGRR LLQLLHPNC RY   EDL + NLSIPSL  K + + +
Sbjct: 390  KVIIRELQAILKELLLDKNGRRVLLQLLHPNCSRYFSPEDLVSFNLSIPSLSPKSE-SKV 448

Query: 954  SLDLILLKEPSKDGESSGKDVNIDSEANVVE-DGNIGPEDNIRIEGGGKKDPAVRRLELL 778
            + D +   + SK  ES  ++   D E    E + N  P ++  I  GGKKDP +RR ELL
Sbjct: 449  NPDSVKEAKSSKTKESGDEETKGDLEVTTAEANENTSPSESHHIAEGGKKDPNLRRQELL 508

Query: 777  VNSGLAESLMDTCIASVEELIRSQFGKEVVYEVATGGAGAILQQTLADKMKDLHKAIASL 598
            V+SGLAE+L+DTCI S  EL+RS FGKEV+YEVATGGAG IL+  L +K+  LH AIASL
Sbjct: 509  VDSGLAENLIDTCIESAGELLRSNFGKEVMYEVATGGAGGILRPALDEKLDALHGAIASL 568

Query: 597  AALPKTEES-EEHVLESFHSSRTIRKLVLDCPVFASILWKKALKGKCETLAQGHSCKVVA 421
            AA PK+EES EEHVLE+FHSSRTIRKLVLDCP FAS LWK AL GKC   AQGHS KVV 
Sbjct: 569  AAQPKSEESEEEHVLENFHSSRTIRKLVLDCPTFASTLWKIALGGKCXMWAQGHSHKVVL 628

Query: 420  AFLESSDSNVRDMALPELQPLIDGGVLK 337
            AFLE+SDS V ++A  ELQPLID G+LK
Sbjct: 629  AFLEASDSEVCELAKGELQPLIDSGILK 656


>ref|XP_002271110.1| PREDICTED: pumilio homolog 24-like [Vitis vinifera]
          Length = 651

 Score =  458 bits (1179), Expect = e-126
 Identities = 253/388 (65%), Positives = 290/388 (74%), Gaps = 2/388 (0%)
 Frame = -1

Query: 1494 GLSKASVLRHMASVIQPILEKGIVDHSIIHTAILEFLNIADKFSAADVIEQLSGPLLVRM 1315
            GL K SVLRHM+SVIQPILEKGIVDHSIIH A++E+L+IADK SAA+VI+QLSG LLVRM
Sbjct: 270  GLQKGSVLRHMSSVIQPILEKGIVDHSIIHRALMEYLSIADKSSAAEVIQQLSGALLVRM 329

Query: 1314 IHTKDGSKLGMLCIKHGGAKERXXXXXXXXXXXXKTALDQYGSMVLVCMLSTVDDTKLLT 1135
            IHT+DGS++G+LCIKHG AKER            K A DQ GSMVL  +LSTVDDTKLLT
Sbjct: 330  IHTRDGSRIGLLCIKHGSAKERKKIIKGMKGHIDKIAHDQCGSMVLAYILSTVDDTKLLT 389

Query: 1134 KIVIRELQPILKELVLHKNGRRPLLQLLHPNCQRYLGLEDLAALNLSIPSLRSKGDGNDM 955
            K++IRELQ ILKEL+L KNGRR LLQLLHPNC RY   EDL + NLSIPSL  K      
Sbjct: 390  KVIIRELQAILKELLLDKNGRRVLLQLLHPNCSRYFSPEDLVSFNLSIPSLSPKE----- 444

Query: 954  SLDLILLKEPSKDGESSGKDVNIDSEANVVE-DGNIGPEDNIRIEGGGKKDPAVRRLELL 778
                    + SK  ES  ++   D E    E + N  P ++  I  GGKKDP +RR ELL
Sbjct: 445  -------AKSSKTKESGDEETKGDLEVTTAEANENTSPSESHHIAEGGKKDPNLRRQELL 497

Query: 777  VNSGLAESLMDTCIASVEELIRSQFGKEVVYEVATGGAGAILQQTLADKMKDLHKAIASL 598
            V+SGLAE+L+DTCI S  EL+RS FGKEV+YEVATGGAG IL+  L +K+  LH AIASL
Sbjct: 498  VDSGLAENLIDTCIESAGELLRSNFGKEVMYEVATGGAGGILRPALDEKLDALHGAIASL 557

Query: 597  AALPKTEES-EEHVLESFHSSRTIRKLVLDCPVFASILWKKALKGKCETLAQGHSCKVVA 421
            AA PK+EES EEHVLE+FHSSRTIRKLVLDCP FAS LWK AL GKCE  AQGHS KVV 
Sbjct: 558  AAQPKSEESEEEHVLENFHSSRTIRKLVLDCPTFASTLWKIALGGKCEMWAQGHSHKVVL 617

Query: 420  AFLESSDSNVRDMALPELQPLIDGGVLK 337
            AFLE+SDS V ++A  ELQPLID G+LK
Sbjct: 618  AFLEASDSEVCELAKGELQPLIDSGILK 645


>ref|XP_002314353.1| predicted protein [Populus trichocarpa] gi|222863393|gb|EEF00524.1|
            predicted protein [Populus trichocarpa]
          Length = 655

 Score =  456 bits (1174), Expect = e-126
 Identities = 247/387 (63%), Positives = 299/387 (77%), Gaps = 2/387 (0%)
 Frame = -1

Query: 1491 LSKASVLRHMASVIQPILEKGIVDHSIIHTAILEFLNIADKFSAADVIEQLSGPLLVRMI 1312
            L K SVLRHMASVIQPILEKGIVDHSIIH  ++E+L+IA K SAA++I+QLSGPLLVRMI
Sbjct: 266  LQKGSVLRHMASVIQPILEKGIVDHSIIHRVLIEYLSIAGKTSAAEIIQQLSGPLLVRMI 325

Query: 1311 HTKDGSKLGMLCIKHGGAKERXXXXXXXXXXXXKTALDQYGSMVLVCMLSTVDDTKLLTK 1132
            HT+DGS++G+LC+KHG AKER            KTA  QYGS+VL C++ST+DDTKL+TK
Sbjct: 326  HTRDGSRIGILCVKHGSAKERKKIVKGLKGTVGKTAHFQYGSLVLACIVSTIDDTKLVTK 385

Query: 1131 IVIRELQPILKELVLHKNGRRPLLQLLHPNCQRYLGLEDLAALNLSIPSLRSKGDGNDMS 952
             VIRELQ ILKELVL KNGRRPLLQLL+PNC RY   +++A+L+LSI SL + G+     
Sbjct: 386  TVIRELQSILKELVLDKNGRRPLLQLLNPNCTRYFSPDEMASLSLSISSLNAMGE----- 440

Query: 951  LDLILLKEPSKDGESSGKDVNIDSEANVVE-DGNIGPEDNIRIEGGGKKDPAVRRLELLV 775
            L++    +  KD ESS KD N   E  + + DG+  PE    IE GGKKDP++RR ELLV
Sbjct: 441  LEVNSETKSLKDEESSDKD-NYGREVTMAKPDGSTSPETLPLIE-GGKKDPSIRRQELLV 498

Query: 774  NSGLAESLMDTCIASVEELIRSQFGKEVVYEVATGGAGAILQQTLADKMKDLHKAIASLA 595
             SGLAESL+D CI + EEL+RS FGKEV+YEVATGG+G ILQ+TL DKM  LH+AIASLA
Sbjct: 499  GSGLAESLIDICIENAEELLRSNFGKEVIYEVATGGSGGILQETLGDKMNTLHEAIASLA 558

Query: 594  ALPKTEESE-EHVLESFHSSRTIRKLVLDCPVFASILWKKALKGKCETLAQGHSCKVVAA 418
            A  K EES+ +HVLE+FHSSRTIRKLV++  +FA+ LWKKALKGKCE   QGHS KV+ A
Sbjct: 559  AESKFEESDKDHVLENFHSSRTIRKLVMESSMFATTLWKKALKGKCEQWTQGHSSKVICA 618

Query: 417  FLESSDSNVRDMALPELQPLIDGGVLK 337
            FLESSD+ +  +A  ELQPLID G+LK
Sbjct: 619  FLESSDAKISKLAKEELQPLIDRGILK 645


>ref|XP_002328590.1| predicted protein [Populus trichocarpa] gi|222838572|gb|EEE76937.1|
            predicted protein [Populus trichocarpa]
          Length = 655

 Score =  448 bits (1153), Expect = e-123
 Identities = 240/386 (62%), Positives = 294/386 (76%), Gaps = 1/386 (0%)
 Frame = -1

Query: 1491 LSKASVLRHMASVIQPILEKGIVDHSIIHTAILEFLNIADKFSAADVIEQLSGPLLVRMI 1312
            L K SV RHMASVIQPILEKGIVDH+IIH  ++E+L+IADK SAA++I+QLSGPLLVRMI
Sbjct: 265  LQKGSVSRHMASVIQPILEKGIVDHTIIHKVLIEYLSIADKTSAAEIIQQLSGPLLVRMI 324

Query: 1311 HTKDGSKLGMLCIKHGGAKERXXXXXXXXXXXXKTALDQYGSMVLVCMLSTVDDTKLLTK 1132
            HT+DGS++G+LC+KHG AKER            KTA  QYGS+VL C++STVDDTKL+ K
Sbjct: 325  HTRDGSRIGILCVKHGSAKERKKIVKGLKGTVGKTAHFQYGSLVLACIVSTVDDTKLVAK 384

Query: 1131 IVIRELQPILKELVLHKNGRRPLLQLLHPNCQRYLGLEDLAALNLSIPSLRSKGDGNDMS 952
             VIRELQ ILKELVL KNGRRPLLQLL+PNC RY   +++A+L+LSI SL + GD     
Sbjct: 385  TVIRELQTILKELVLDKNGRRPLLQLLNPNCTRYFSPDEMASLSLSISSLNAMGD----- 439

Query: 951  LDLILLKEPSKDGESSGKDVNIDSEANVVEDGNIGPEDNIRIEGGGKKDPAVRRLELLVN 772
            L++    +  KD ESS KD N   +  +VE       + +++  GGKKDP++RR ELLV 
Sbjct: 440  LEVNRETKSLKDEESSDKD-NSGRDVTMVEADGSASSETLQLVEGGKKDPSIRRQELLVG 498

Query: 771  SGLAESLMDTCIASVEELIRSQFGKEVVYEVATGGAGAILQQTLADKMKDLHKAIASLAA 592
            SGLA++L+D C  + EEL+RS FGKEV+YE ATGG+G ILQQTL D++  LH+AIAS+AA
Sbjct: 499  SGLAKNLIDMCTENAEELLRSNFGKEVLYEAATGGSGGILQQTLGDELNALHEAIASVAA 558

Query: 591  LPKTEESE-EHVLESFHSSRTIRKLVLDCPVFASILWKKALKGKCETLAQGHSCKVVAAF 415
              K+E SE EHVLE+FHSSRTIRKLVLD P FA+ LWKKAL GKCE  AQGHS KV+ AF
Sbjct: 559  ESKSEGSEKEHVLENFHSSRTIRKLVLDNPAFAATLWKKALSGKCEQWAQGHSSKVICAF 618

Query: 414  LESSDSNVRDMALPELQPLIDGGVLK 337
            LESSD+ V  +A  ELQPLI+ G+LK
Sbjct: 619  LESSDAMVSKLAKEELQPLINRGILK 644


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