BLASTX nr result

ID: Coptis23_contig00002245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002245
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...   240   1e-61
ref|XP_002510760.1| conserved hypothetical protein [Ricinus comm...   239   2e-61
ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660...   233   2e-59
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   232   2e-59

>ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|222842334|gb|EEE79881.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  242 bits (618), Expect = 2e-62
 Identities = 122/168 (72%), Positives = 137/168 (81%), Gaps = 1/168 (0%)
 Frame = -3

Query: 502 GNASGNRANGAQPVGMPNQATNINXXXXXXXXXXXSFTNSALPSTAQSPSCFLSMSANSP 323
           GNAS  + NG QPVG+ NQAT +            SFTNSALPSTAQSPSCFLS+SANSP
Sbjct: 39  GNASAAQPNGPQPVGLTNQATALAPSLLAPPSSPASFTNSALPSTAQSPSCFLSLSANSP 98

Query: 322 GGPSN-VYATGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPELNHLTTPSSPDVPFALTF 146
           GGPS+ +YATGPYAHETQLVSPPVFSTFTTEPSTAP TPPPEL HLTTPSSPDVPFA   
Sbjct: 99  GGPSSTMYATGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFL 158

Query: 145 SSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLS 2
           +S+ DLKG  +++Y+ A+DLQ+TY LYP SPASSL+SPIS TSGDCLS
Sbjct: 159 TSSRDLKGAEKNNYIVASDLQSTYSLYPGSPASSLLSPISRTSGDCLS 206


>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score =  240 bits (612), Expect = 1e-61
 Identities = 123/168 (73%), Positives = 134/168 (79%), Gaps = 1/168 (0%)
 Frame = -3

Query: 502 GNASGNRANGAQPVGMPNQATNINXXXXXXXXXXXSFTNSALPSTAQSPSCFLSMSANSP 323
           GNAS  + NG Q VG+ NQ T +            SFTNSALPSTAQSPSCFLSMSANSP
Sbjct: 51  GNASATQPNGPQAVGLTNQTTALAPSLLAPPSSPASFTNSALPSTAQSPSCFLSMSANSP 110

Query: 322 GGPSN-VYATGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPELNHLTTPSSPDVPFALTF 146
            GPS+ ++ATGPYAHETQLVSPPVFSTFTTEPSTAP TPPPEL HLTTPSSPDVPFA   
Sbjct: 111 EGPSSTMFATGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFL 170

Query: 145 SSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLS 2
           SS+MDLK   +++Y+ ANDLQATY LYP SPASSLISPIS TSGDCLS
Sbjct: 171 SSSMDLKSAGKTNYIAANDLQATYSLYPGSPASSLISPISRTSGDCLS 218


>ref|XP_002510760.1| conserved hypothetical protein [Ricinus communis]
           gi|223551461|gb|EEF52947.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  239 bits (610), Expect = 2e-61
 Identities = 122/168 (72%), Positives = 136/168 (80%), Gaps = 1/168 (0%)
 Frame = -3

Query: 502 GNASGNRANGAQPVGMPNQATNINXXXXXXXXXXXSFTNSALPSTAQSPSCFLSMSANSP 323
           GNA+  + NG Q  G+ NQAT +            SFTNSALPSTAQSPSCFLS+SANSP
Sbjct: 45  GNATAAQPNGPQVGGLTNQATTLAPSLLAPPSSPASFTNSALPSTAQSPSCFLSLSANSP 104

Query: 322 GGPSN-VYATGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPELNHLTTPSSPDVPFALTF 146
           GGPS+ ++ATGPYAHETQLVSPPVFSTFTTEPSTAP TPPPEL HLTTPSSPDVPFA   
Sbjct: 105 GGPSSTMFATGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFAHFL 164

Query: 145 SSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLS 2
           SS++DLK T +++Y+ ANDLQATY LYP SPASSLISPIS TSGDCLS
Sbjct: 165 SSSVDLKSTEKANYIAANDLQATYSLYPGSPASSLISPISRTSGDCLS 212


>ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660-like [Cucumis sativus]
          Length = 469

 Score =  233 bits (593), Expect = 2e-59
 Identities = 118/168 (70%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
 Frame = -3

Query: 502 GNASGNRANGAQPVGMPNQATNINXXXXXXXXXXXSFTNSALPSTAQSPSCFLSMSANSP 323
           GN    + NG Q  GM NQAT I            SFTNSALPST QSPSCFLS+SANSP
Sbjct: 45  GNVVTTQPNGPQAAGMTNQATVITPSLLAPPSSPASFTNSALPSTVQSPSCFLSLSANSP 104

Query: 322 GGPSN-VYATGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPELNHLTTPSSPDVPFALTF 146
           GGPS+ +YATGPYAH+TQLVSPPVFS F TEPSTAP TPPPEL HLTTPSSPDVPFA   
Sbjct: 105 GGPSSTMYATGPYAHDTQLVSPPVFSAFNTEPSTAPLTPPPELAHLTTPSSPDVPFAQFL 164

Query: 145 SSAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLS 2
           SS+ DLKGT +++Y+ +NDLQA Y LYP SPASSL+SPIS TSGDCLS
Sbjct: 165 SSSEDLKGTGKANYIASNDLQAAYSLYPGSPASSLVSPISRTSGDCLS 212


>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  232 bits (592), Expect = 2e-59
 Identities = 118/167 (70%), Positives = 132/167 (79%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499 NASGNRANGAQPVGMPNQATNINXXXXXXXXXXXSFTNSALPSTAQSPSCFLSMSANSPG 320
           N   ++ NG Q VG+ NQAT +            SFT+SALPSTAQSPSCFLS+SANSPG
Sbjct: 46  NGPASQPNGPQVVGLTNQATGLAPSLLAPPSSPASFTHSALPSTAQSPSCFLSLSANSPG 105

Query: 319 GPSN-VYATGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPELNHLTTPSSPDVPFALTFS 143
           GPS+ ++ATGPYAHETQLVSPPVFS FTTEPSTAP TPPPEL HLTTPSSPDVPFA   S
Sbjct: 106 GPSSTMFATGPYAHETQLVSPPVFSNFTTEPSTAPLTPPPELAHLTTPSSPDVPFAHFLS 165

Query: 142 SAMDLKGTSRSSYVTANDLQATYPLYPESPASSLISPISGTSGDCLS 2
           S++DLK   + +Y+TANDLQATY LYP SPASSLISPIS  SGDCLS
Sbjct: 166 SSVDLKNNGKGNYITANDLQATYSLYPGSPASSLISPISRNSGDCLS 212


Top