BLASTX nr result

ID: Coptis23_contig00002238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002238
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [V...   478   e-132
ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-li...   468   e-129
gb|ACU23791.1| unknown [Glycine max]                                  466   e-129
ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-li...   464   e-128
ref|XP_003523139.1| PREDICTED: proteasome subunit beta type-5-li...   464   e-128

>ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
           gi|297738390|emb|CBI27591.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  478 bits (1229), Expect = e-132
 Identities = 233/245 (95%), Positives = 240/245 (97%)
 Frame = +3

Query: 129 APSFELPISKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 308
           APSFELP + +FDGFQK+AIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28  APSFELPNTTDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 309 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 488
           KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 88  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 489 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSIEEA 668
           MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMS+EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSVEEA 207

Query: 669 AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPVVPAIVEQEMA 848
           AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPV+P+ VEQEM 
Sbjct: 208 AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPVMPSTVEQEMV 267

Query: 849 DFAGA 863
           + AGA
Sbjct: 268 EVAGA 272


>ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
          Length = 272

 Score =  468 bits (1203), Expect = e-129
 Identities = 228/245 (93%), Positives = 236/245 (96%)
 Frame = +3

Query: 129 APSFELPISKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 308
           APSF+LP S +FDGF KEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28  APSFDLPNSNDFDGFVKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 309 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 488
           KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 88  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 489 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSIEEA 668
           MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD+GYRYD+S+EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEA 207

Query: 669 AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPVVPAIVEQEMA 848
           AELARR+IYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY YYPV P+ VEQEM 
Sbjct: 208 AELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMV 267

Query: 849 DFAGA 863
           +  GA
Sbjct: 268 EATGA 272


>gb|ACU23791.1| unknown [Glycine max]
          Length = 272

 Score =  466 bits (1199), Expect = e-129
 Identities = 227/245 (92%), Positives = 236/245 (96%)
 Frame = +3

Query: 129 APSFELPISKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 308
           APSF+LP S +FDGF KEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28  APSFDLPNSNDFDGFVKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 309 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 488
           KIIEINPYMLGT+AGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 88  KIIEINPYMLGTVAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 489 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSIEEA 668
           MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD+GYRYD+S+EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEA 207

Query: 669 AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPVVPAIVEQEMA 848
           AELARR+IYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY YYPV P+ VEQEM 
Sbjct: 208 AELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMV 267

Query: 849 DFAGA 863
           +  GA
Sbjct: 268 EATGA 272


>ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
           gi|449529978|ref|XP_004171974.1| PREDICTED: proteasome
           subunit beta type-5-like [Cucumis sativus]
          Length = 272

 Score =  464 bits (1195), Expect = e-128
 Identities = 224/245 (91%), Positives = 234/245 (95%)
 Frame = +3

Query: 129 APSFELPISKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 308
           APSFE+P S +FDGFQK+AIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28  APSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 309 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 488
           KIIEINPYMLGTMAGGAADCQFWHRNLG+KCRLH+LANKRRISV GASKLLANILYSYRG
Sbjct: 88  KIIEINPYMLGTMAGGAADCQFWHRNLGVKCRLHKLANKRRISVAGASKLLANILYSYRG 147

Query: 489 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSIEEA 668
           MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYD+S+EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDLSVEEA 207

Query: 669 AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPVVPAIVEQEMA 848
           AELARR+IYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY YYPV P  V+QEM 
Sbjct: 208 AELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVTPTTVDQEMT 267

Query: 849 DFAGA 863
           +   A
Sbjct: 268 EVTAA 272


>ref|XP_003523139.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
          Length = 272

 Score =  464 bits (1194), Expect = e-128
 Identities = 226/245 (92%), Positives = 235/245 (95%)
 Frame = +3

Query: 129 APSFELPISKNFDGFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 308
           AP F+LP S +FDGF K+AIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK
Sbjct: 28  APFFDLPNSNDFDGFLKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 87

Query: 309 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 488
           KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG
Sbjct: 88  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 489 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSIEEA 668
           MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLD+GYRYD+S+EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEA 207

Query: 669 AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPVVPAIVEQEMA 848
           AELARR+IYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY YYPV P+ VEQEM 
Sbjct: 208 AELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMV 267

Query: 849 DFAGA 863
           +  GA
Sbjct: 268 EATGA 272


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