BLASTX nr result

ID: Coptis23_contig00002208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002208
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275132.2| PREDICTED: uncharacterized protein LOC100244...   266   5e-69
ref|XP_002511877.1| hypothetical protein RCOM_1615820 [Ricinus c...   224   2e-56
ref|XP_002320804.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-54
ref|XP_002302591.1| predicted protein [Populus trichocarpa] gi|1...   219   1e-54
gb|AFK46799.1| unknown [Lotus japonicus]                              218   2e-54

>ref|XP_002275132.2| PREDICTED: uncharacterized protein LOC100244782 [Vitis vinifera]
          Length = 319

 Score =  266 bits (680), Expect = 5e-69
 Identities = 151/306 (49%), Positives = 187/306 (61%), Gaps = 11/306 (3%)
 Frame = -3

Query: 960 NEWEVVSLTASAYAAAPGPEGFESIHDDQGSNESSRDVEEATRALFMSGHFVFPPSEHEN 781
           NEWEVVSLTASAYAAAPGP+G E + DD  SN    +  E + A+F+SGHFVFPPS+HEN
Sbjct: 15  NEWEVVSLTASAYAAAPGPKGIE-MSDDGKSNTFKGNEAETSHAMFLSGHFVFPPSQHEN 73

Query: 780 LPLDPIDNEIHVEPGSEVVHPNISDLGMEEGDXXXXXXXENWTFKGMKVPEEVHGIQFYE 601
           LPL+P D EIH E GSE V P   +  +E+G        +NW+ K +   +E  GIQ ++
Sbjct: 74  LPLEPDDTEIHNEHGSEDVIP---ESNVEKGGHSDGKNEDNWSVKDLTKGDEFPGIQLFD 130

Query: 600 EKEKYLSGHDTEFGAGKALQGLNLVEEEQTIYSALKLSSLLDEAEC------EDFLVIPE 439
           E  K LS     F  G AL+GLNLV++E  IYSA K SSL  E         +   VIP+
Sbjct: 131 EGGKSLSDRGKGFEEGTALKGLNLVDKEPDIYSAAKFSSLHSEPTIGGSTTYDGNTVIPD 190

Query: 438 ----PNVXXXXXXXXXXXXXXXXSPKNENGSGLPCEAWWKRQAASFYAQAKEANAFWSVF 271
               P +                     +GS LPCEAWWKR+AASFY  AKEANAFWS+F
Sbjct: 191 LVEPPELGADLHADISQSPKSTKDDDRYDGSNLPCEAWWKRRAASFYGHAKEANAFWSIF 250

Query: 270 VAAALMGIVILG-XXXXXXXXXXXQKWHFSINDEKMNRMMGSLSRFKDVIVGGHRRGSII 94
           +AAA+MG+VILG             KW F +NDEKM RM+G + R KDVIVGG+RRGS I
Sbjct: 251 IAAAVMGLVILGQRWQHERWQVLQLKWQFGVNDEKMGRMLGPIIRLKDVIVGGNRRGSFI 310

Query: 93  RDSASA 76
           R S+++
Sbjct: 311 RGSSTS 316


>ref|XP_002511877.1| hypothetical protein RCOM_1615820 [Ricinus communis]
           gi|223549057|gb|EEF50546.1| hypothetical protein
           RCOM_1615820 [Ricinus communis]
          Length = 312

 Score =  224 bits (572), Expect = 2e-56
 Identities = 140/305 (45%), Positives = 182/305 (59%), Gaps = 9/305 (2%)
 Frame = -3

Query: 960 NEWEVVSLTASAYAAAPGPEGFESIHDDQGSNESSRDVEEATRA-LFMSGHFVFPPSEHE 784
           NEWEVVSLTAS Y AAPGP+  E + D++  ++   D  E++RA LF S HFVFPPS+HE
Sbjct: 17  NEWEVVSLTASTYDAAPGPKEVE-LKDEENKDKVYGDEAESSRASLFFSRHFVFPPSQHE 75

Query: 783 NLPLDPIDNEI-HVEPGSEVVHPNISDLGMEEGDXXXXXXXENWTFKGMKVPEEVHGIQF 607
           NLPL+P ++EI + E G  VV    S+LG+EEGD       EN  FKG+ V EE+ G+QF
Sbjct: 76  NLPLEPDNSEILNEEVGKNVV----SELGVEEGDKFGRKDEENQPFKGLHVSEEIPGLQF 131

Query: 606 YEEKEKYLSGHDTEFGAGKALQGLNLVEEEQTIYSALKLSSLLDEAECE------DFLVI 445
            + K   +SG  +EF     LQ L L+E+EQ+IY+    +    E E +      + L I
Sbjct: 132 SDGKA--ISG--SEFEESTTLQELGLIEKEQSIYNTDAFNPFHSETEHDGSDTYGESLGI 187

Query: 444 PEPNVXXXXXXXXXXXXXXXXSPKNENGSGLPCEAWWKRQAASFYAQAKEANAFWSVFVA 265
              N                      +GS LPCEAWWKR+AAS Y+ AKE NA WS+FVA
Sbjct: 188 SIANEQSEQGSDFSTDISHSPKAVKYDGSNLPCEAWWKRRAASLYSHAKETNALWSIFVA 247

Query: 264 AALMGIVILG-XXXXXXXXXXXQKWHFSINDEKMNRMMGSLSRFKDVIVGGHRRGSIIRD 88
           AA+MG+VI+G             KW  +IN EK  R++G +SR KDVIVGGHRRG+ IR 
Sbjct: 248 AAVMGLVIIGQRWQQERWRALQLKWQANIN-EKTGRILGPISRLKDVIVGGHRRGTFIRG 306

Query: 87  SASAE 73
            +S+E
Sbjct: 307 GSSSE 311


>ref|XP_002320804.1| predicted protein [Populus trichocarpa] gi|222861577|gb|EEE99119.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  219 bits (557), Expect = 1e-54
 Identities = 135/302 (44%), Positives = 172/302 (56%), Gaps = 6/302 (1%)
 Frame = -3

Query: 960 NEWEVVSLTASAYAAAPGPEGFESIHDDQGSNESSRDVEEATRALFMSGHFVFPPSEHEN 781
           N+WEVVSLTAS YAAAPGP+ F+   DD  S     D  E++ ALFMS HFVFPPS+HEN
Sbjct: 15  NDWEVVSLTASTYAAAPGPKEFDQ-KDDDNSKVYEEDEAESSHALFMSRHFVFPPSQHEN 73

Query: 780 LPLDPIDNEIHVEPGSEVVHPNIS-DLGMEEGDXXXXXXXENWTFKGMKVPEEVHGIQFY 604
           LPL+ +++EI        V  N++ +LG EEG        E W FKG++  EE  GIQ +
Sbjct: 74  LPLEHVNSEIL----DSHVGKNVALELGPEEGGRSSGKNEEIWPFKGLEESEEYPGIQLF 129

Query: 603 EEKEKYLSGHDTEFGAGKALQGLNLVEEEQTIYSALKLSSLLDEAECEDFLVIPE----P 436
           +EK K       EF     LQ  +  ++EQ+IYS   L+S  +E E        E    P
Sbjct: 130 DEKGK----KGQEFEESTTLQDFS--DKEQSIYSTAALTSFHNETELSGSTTYGENLGIP 183

Query: 435 NVXXXXXXXXXXXXXXXXSPKNENGSGLPCEAWWKRQAASFYAQAKEANAFWSVFVAAAL 256
            V                SPK    + LP  AWWKR+AAS YA AKEAN FWS+FV AA+
Sbjct: 184 EVNESSERGLDFPAVVPFSPKAAKDADLPSNAWWKRRAASLYAHAKEANTFWSIFVTAAV 243

Query: 255 MGIVILG-XXXXXXXXXXXQKWHFSINDEKMNRMMGSLSRFKDVIVGGHRRGSIIRDSAS 79
           MGIVILG             KW  SIN+E+   ++  ++R KDVIVGG+RRGS IR S+S
Sbjct: 244 MGIVILGQRWQQERWQALQLKWQASINNERSGSVLRPITRLKDVIVGGNRRGSFIRGSSS 303

Query: 78  AE 73
           ++
Sbjct: 304 SD 305


>ref|XP_002302591.1| predicted protein [Populus trichocarpa] gi|118485052|gb|ABK94390.1|
           unknown [Populus trichocarpa]
           gi|222844317|gb|EEE81864.1| predicted protein [Populus
           trichocarpa]
          Length = 299

 Score =  219 bits (557), Expect = 1e-54
 Identities = 131/300 (43%), Positives = 168/300 (56%), Gaps = 4/300 (1%)
 Frame = -3

Query: 960 NEWEVVSLTASAYAAAPGPEGFESIHDDQGSNESSRDVEEATRALFMSGHFVFPPSEHEN 781
           N+WEVVSLTAS YAAAPGP+  +   D + S     D +E +RALFMS HFV PP +HEN
Sbjct: 15  NDWEVVSLTASTYAAAPGPKEVDQ-KDYESSRAYDEDGDETSRALFMSRHFVLPPGQHEN 73

Query: 780 LPLDPIDNEIHVEPGSEVVHPNISDLGMEEGDXXXXXXXENWTFKGMKVPEEVHGIQFYE 601
           L L+P+++EI      + V P   +LG+EEG        E W  KG+   EE HG+Q ++
Sbjct: 74  LSLEPVNSEILDSQVGKNVPP---ELGLEEGGRSSCKNEEIWPLKGLDESEEFHGMQLFD 130

Query: 600 EKEKYLSGHDTEFGAGKALQGLNLVEEEQTIYSALKLSSLLDEAECEDFLVIPE----PN 433
            K K    +  EF     LQ  +  ++EQ+IYS     SL  E          E    P 
Sbjct: 131 VKGK----NGKEFEESTTLQDFS--DKEQSIYSTAAFGSLHSETALGGSTTYDENLGIPE 184

Query: 432 VXXXXXXXXXXXXXXXXSPKNENGSGLPCEAWWKRQAASFYAQAKEANAFWSVFVAAALM 253
           V                SPK      LPC+AWWKR+ AS +A AKEAN FWS+FVAAA+M
Sbjct: 185 VNEPSEKVLDFPTDVPSSPKAAKDDSLPCDAWWKRRVASLHAHAKEANTFWSIFVAAAVM 244

Query: 252 GIVILGXXXXXXXXXXXQKWHFSINDEKMNRMMGSLSRFKDVIVGGHRRGSIIRDSASAE 73
           GIVILG           ++W   IN+EK  R++G ++R KDVIVGGHRRGS IR S S++
Sbjct: 245 GIVILG------QRWQQERWQAIINNEKSGRILGPITRLKDVIVGGHRRGSFIRGSTSSD 298


>gb|AFK46799.1| unknown [Lotus japonicus]
          Length = 309

 Score =  218 bits (554), Expect = 2e-54
 Identities = 129/299 (43%), Positives = 168/299 (56%), Gaps = 3/299 (1%)
 Frame = -3

Query: 960 NEWEVVSLTASAYAAAPGPEGFESIHDDQGSNESSRDVEEATRALFMSGHFVFPPSEHEN 781
           N+WEVVSLTAS YAAAPGP   E + D    +  ++D  E +RALFMSGHFVFPPS+HEN
Sbjct: 15  NDWEVVSLTASTYAAAPGPTEVE-LKDGDKEDVYAQDEAETSRALFMSGHFVFPPSQHEN 73

Query: 780 LPLDPIDNEIHVEPGSEVVHPNISDLGMEEGDXXXXXXXENWTFKGMKVPEEVHGIQFYE 601
           LP+ P  +EIH E   E +    S+   E+         EN T  G+ V E+  GIQ+++
Sbjct: 74  LPVQPDCSEIHDESRDEDIS---SEETREKATRRSGKDEENLTLAGLNVSEDFEGIQYFD 130

Query: 600 EKEKYLSGHDTEFGAGKALQGLNLVEEE--QTIYSALKLSSLLDEAECEDFLVIPEPNVX 427
           EK   LS H  +F  G  L G  LV +   ++IY   K ++   E    D     +  V 
Sbjct: 131 EKINRLSVHGKQFEEGTTLPGYVLVGKRKGESIYDPAKYTNFHSETAIGDVTSYDQSIVE 190

Query: 426 XXXXXXXXXXXXXXXSPKNE-NGSGLPCEAWWKRQAASFYAQAKEANAFWSVFVAAALMG 250
                             ++ + S LPC AWWKR AAS Y  AKEAN  WS+F+AA +MG
Sbjct: 191 SETTESEEQLPVNPFRDDDKYDTSDLPCGAWWKRTAASLYTHAKEANTVWSIFIAATVMG 250

Query: 249 IVILGXXXXXXXXXXXQKWHFSINDEKMNRMMGSLSRFKDVIVGGHRRGSIIRDSASAE 73
           IV+LG            KW  S+NDE  ++++G +SR KDVIVGGHRRGS+IR S+S E
Sbjct: 251 IVMLG-HRWQQQRALQLKWQVSVNDEVRSKVLGPISRLKDVIVGGHRRGSLIRGSSSGE 308


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