BLASTX nr result

ID: Coptis23_contig00002199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002199
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577351.1| PREDICTED: 60S ribosomal protein L5-1-like [...   119   3e-25
gb|ADR71225.1| 60S ribosomal protein L5A [Hevea brasiliensis]         117   8e-25
ref|XP_003579707.1| PREDICTED: 60S ribosomal protein L5-1-like [...   117   8e-25
gb|AEV92989.1| 60S ribosomal protein L5 [Triticum aestivum]           117   1e-24
dbj|BAJ89012.1| predicted protein [Hordeum vulgare subsp. vulgare]    117   1e-24

>ref|XP_003577351.1| PREDICTED: 60S ribosomal protein L5-1-like [Brachypodium
           distachyon]
          Length = 302

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/73 (79%), Positives = 59/73 (80%)
 Frame = +2

Query: 2   DTRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEVHR 181
           D RRPFRALLDVGLIRTTTGNRVF            IPHSDKRFAGFKKDEKQLDAEVHR
Sbjct: 136 DERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDAEVHR 195

Query: 182 KYVYGGHVAAYMR 220
           KY+YGGHVA YMR
Sbjct: 196 KYIYGGHVADYMR 208


>gb|ADR71225.1| 60S ribosomal protein L5A [Hevea brasiliensis]
          Length = 298

 Score =  117 bits (294), Expect = 8e-25
 Identities = 56/73 (76%), Positives = 59/73 (80%)
 Frame = +2

Query: 2   DTRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEVHR 181
           +TRRPFRALLDVGL+RTTTGNRVF            IPHSDKRFAGF KD KQLDAEVHR
Sbjct: 136 ETRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFSKDSKQLDAEVHR 195

Query: 182 KYVYGGHVAAYMR 220
           KY+YGGHVAAYMR
Sbjct: 196 KYIYGGHVAAYMR 208


>ref|XP_003579707.1| PREDICTED: 60S ribosomal protein L5-1-like [Brachypodium
           distachyon]
          Length = 301

 Score =  117 bits (294), Expect = 8e-25
 Identities = 57/73 (78%), Positives = 59/73 (80%)
 Frame = +2

Query: 2   DTRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEVHR 181
           D RRPFRALLDVGLIRTTTGNRVF            IPHSDKRFAGFKKDEKQLDAEVHR
Sbjct: 136 DERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDAEVHR 195

Query: 182 KYVYGGHVAAYMR 220
           KY+YGGHVA YM+
Sbjct: 196 KYIYGGHVADYMK 208


>gb|AEV92989.1| 60S ribosomal protein L5 [Triticum aestivum]
          Length = 301

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/73 (76%), Positives = 59/73 (80%)
 Frame = +2

Query: 2   DTRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEVHR 181
           D RRPFRALLDVGLIRTTTGNRVF            IPHSDKRFAGFKKDEKQLDAE+HR
Sbjct: 136 DERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDAEIHR 195

Query: 182 KYVYGGHVAAYMR 220
           KY+YGGHVA YM+
Sbjct: 196 KYIYGGHVADYMK 208


>dbj|BAJ89012.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 301

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/73 (76%), Positives = 59/73 (80%)
 Frame = +2

Query: 2   DTRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEVHR 181
           D RRPFRALLDVGLIRTTTGNRVF            IPHSDKRFAGFKKDEKQLDAE+HR
Sbjct: 136 DERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDAEIHR 195

Query: 182 KYVYGGHVAAYMR 220
           KY+YGGHVA YM+
Sbjct: 196 KYIYGGHVADYMK 208


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