BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002197
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38567.3| unnamed protein product [Vitis vinifera]              432   e-119
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   432   e-119
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6...   425   e-116
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...   408   e-111
ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109

>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  432 bits (1111), Expect = e-119
 Identities = 217/293 (74%), Positives = 251/293 (85%)
 Frame = +3

Query: 3    KVDIDAFEEAEQELTVTEDAFVEAEKGKSHYEQVMQEKVVPAIKKAETQLQKLQVDRQEN 182
            KV+IDA+E AE EL V E     AE  K+HYE +M  KV+P IK+AETQ Q+L+ +R+E+
Sbjct: 736  KVEIDAYEAAENELVVIEQELCSAETEKTHYEGIMNNKVLPDIKEAETQYQELEHNRKES 795

Query: 183  CKKASIICSESEVETLGGCTGSTPEQLTAQINRLKQRLQQESRRHADSIDDLRELYEKKY 362
            C+KASIIC ESE+E LGGC  STPEQL+AQ+NRL QRLQ ES+R+A+ I+DLR +Y+KK 
Sbjct: 796  CRKASIICPESEIEALGGCK-STPEQLSAQLNRLNQRLQSESQRYAEPIEDLRMIYDKKE 854

Query: 363  CKIIRKQKTYKAFREKLEVCQNALALRLSKLQRNATFLRRQLTWQFNGHLGKKGISGHTK 542
             +I+RKQ+TY+AFREKL  C+ AL LR SK QRNAT L+RQLTWQFN HL KKGISGH K
Sbjct: 855  RRILRKQQTYEAFREKLNACKEALDLRWSKFQRNATLLKRQLTWQFNAHLRKKGISGHIK 914

Query: 543  VNYEHRTLSVEVKMPQDASSSIVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD 722
            V+YE +TLSVEVKMPQDAS++IVRDTRGLSGGERSFSTLCFALALHEMTE+PFRAMDEFD
Sbjct: 915  VSYEEKTLSVEVKMPQDASNNIVRDTRGLSGGERSFSTLCFALALHEMTESPFRAMDEFD 974

Query: 723  VFMDAVSRKISLDTLVDFALAHGSQWIFITPHDISMVKPSTRVKKQQMAAPRS 881
            VFMDAVSRKISLDTLV+FALA GSQWIFITPHDISMVK   R+KKQQMAAPRS
Sbjct: 975  VFMDAVSRKISLDTLVNFALAQGSQWIFITPHDISMVKQGERIKKQQMAAPRS 1027


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
            [Vitis vinifera]
          Length = 1057

 Score =  432 bits (1111), Expect = e-119
 Identities = 217/293 (74%), Positives = 251/293 (85%)
 Frame = +3

Query: 3    KVDIDAFEEAEQELTVTEDAFVEAEKGKSHYEQVMQEKVVPAIKKAETQLQKLQVDRQEN 182
            KV+IDA+E AE EL V E     AE  K+HYE +M  KV+P IK+AETQ Q+L+ +R+E+
Sbjct: 766  KVEIDAYEAAENELVVIEQELCSAETEKTHYEGIMNNKVLPDIKEAETQYQELEHNRKES 825

Query: 183  CKKASIICSESEVETLGGCTGSTPEQLTAQINRLKQRLQQESRRHADSIDDLRELYEKKY 362
            C+KASIIC ESE+E LGGC  STPEQL+AQ+NRL QRLQ ES+R+A+ I+DLR +Y+KK 
Sbjct: 826  CRKASIICPESEIEALGGCK-STPEQLSAQLNRLNQRLQSESQRYAEPIEDLRMIYDKKE 884

Query: 363  CKIIRKQKTYKAFREKLEVCQNALALRLSKLQRNATFLRRQLTWQFNGHLGKKGISGHTK 542
             +I+RKQ+TY+AFREKL  C+ AL LR SK QRNAT L+RQLTWQFN HL KKGISGH K
Sbjct: 885  RRILRKQQTYEAFREKLNACKEALDLRWSKFQRNATLLKRQLTWQFNAHLRKKGISGHIK 944

Query: 543  VNYEHRTLSVEVKMPQDASSSIVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD 722
            V+YE +TLSVEVKMPQDAS++IVRDTRGLSGGERSFSTLCFALALHEMTE+PFRAMDEFD
Sbjct: 945  VSYEEKTLSVEVKMPQDASNNIVRDTRGLSGGERSFSTLCFALALHEMTESPFRAMDEFD 1004

Query: 723  VFMDAVSRKISLDTLVDFALAHGSQWIFITPHDISMVKPSTRVKKQQMAAPRS 881
            VFMDAVSRKISLDTLV+FALA GSQWIFITPHDISMVK   R+KKQQMAAPRS
Sbjct: 1005 VFMDAVSRKISLDTLVNFALAQGSQWIFITPHDISMVKQGERIKKQQMAAPRS 1057


>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
            communis] gi|223550086|gb|EEF51573.1| structural
            maintenance of chromosomes 6 smc6, putative [Ricinus
            communis]
          Length = 1058

 Score =  425 bits (1092), Expect = e-116
 Identities = 215/293 (73%), Positives = 245/293 (83%)
 Frame = +3

Query: 3    KVDIDAFEEAEQELTVTEDAFVEAEKGKSHYEQVMQEKVVPAIKKAETQLQKLQVDRQEN 182
            K ++DA+EEAE EL   E     AE  K+HYE VM  KV+P I+ AE   Q+L+ +R+E+
Sbjct: 766  KEELDAYEEAEGELMKIEKDLQSAETEKAHYEGVMTNKVLPDIEAAEAHYQELEENRKES 825

Query: 183  CKKASIICSESEVETLGGCTGSTPEQLTAQINRLKQRLQQESRRHADSIDDLRELYEKKY 362
            C+KASIIC ES++E LGG   STPEQL+AQ+NRL QRLQ ES+R++DSIDDLR LYEKK 
Sbjct: 826  CRKASIICPESDIEALGGRDRSTPEQLSAQLNRLNQRLQHESQRYSDSIDDLRMLYEKKQ 885

Query: 363  CKIIRKQKTYKAFREKLEVCQNALALRLSKLQRNATFLRRQLTWQFNGHLGKKGISGHTK 542
             KI++KQ+ YK FREKLE C+ AL LR +K QRN+T L+RQLTW FNGHLGKKGISG+ K
Sbjct: 886  RKILKKQQMYKGFREKLEACKRALDLRWNKFQRNSTLLKRQLTWNFNGHLGKKGISGNIK 945

Query: 543  VNYEHRTLSVEVKMPQDASSSIVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD 722
            V+YE +TL VEVKMPQDASSS VRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD
Sbjct: 946  VSYEEKTLRVEVKMPQDASSSTVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD 1005

Query: 723  VFMDAVSRKISLDTLVDFALAHGSQWIFITPHDISMVKPSTRVKKQQMAAPRS 881
            VFMDAVSRKISLDTLVDFALA GSQWIFITPHDISMVK   R+KKQQMAAPRS
Sbjct: 1006 VFMDAVSRKISLDTLVDFALAQGSQWIFITPHDISMVKQGERIKKQQMAAPRS 1058


>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
            [Cucumis sativus]
          Length = 1052

 Score =  408 bits (1049), Expect = e-111
 Identities = 209/293 (71%), Positives = 241/293 (82%)
 Frame = +3

Query: 3    KVDIDAFEEAEQELTVTEDAFVEAEKGKSHYEQVMQEKVVPAIKKAETQLQKLQVDRQEN 182
            K +IDAFEE E+++   E     AEK K HYE +M  KV+  IK+AE Q Q+L+  R+E+
Sbjct: 760  KGEIDAFEEVERDMLQLERKLHSAEKEKDHYEGIMTNKVLFDIKEAERQHQELERHRKES 819

Query: 183  CKKASIICSESEVETLGGCTGSTPEQLTAQINRLKQRLQQESRRHADSIDDLRELYEKKY 362
              KASIIC ESE+E LG   GSTPEQL+AQ+ RL QRL  E+RR ++S++DLR +YEKK 
Sbjct: 820  YSKASIICPESEIEALGDWDGSTPEQLSAQLTRLNQRLNNETRRCSESLEDLRMMYEKKE 879

Query: 363  CKIIRKQKTYKAFREKLEVCQNALALRLSKLQRNATFLRRQLTWQFNGHLGKKGISGHTK 542
              IIRK++TYK+FREKL+ CQ AL LR +K +RNA+ L+RQLTWQFNGHL KKGISG+ K
Sbjct: 880  RTIIRKRQTYKSFREKLDACQKALQLRWNKFERNASLLKRQLTWQFNGHLRKKGISGNIK 939

Query: 543  VNYEHRTLSVEVKMPQDASSSIVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD 722
            VNYE +TLSVEVKMPQDASSS VRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD
Sbjct: 940  VNYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD 999

Query: 723  VFMDAVSRKISLDTLVDFALAHGSQWIFITPHDISMVKPSTRVKKQQMAAPRS 881
            VFMDAVSRKISLDTLVDFALA GSQWIFITPHDI +VK   R+KKQQMAAPRS
Sbjct: 1000 VFMDAVSRKISLDTLVDFALAQGSQWIFITPHDIGVVKQGERIKKQQMAAPRS 1052


>ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|222840926|gb|EEE78473.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  401 bits (1030), Expect = e-109
 Identities = 202/293 (68%), Positives = 239/293 (81%)
 Frame = +3

Query: 3    KVDIDAFEEAEQELTVTEDAFVEAEKGKSHYEQVMQEKVVPAIKKAETQLQKLQVDRQEN 182
            K +I+A E+AE EL   E     AE  K+ YE VM  +V+P I+ AE Q ++L+ +R+E+
Sbjct: 754  KEEINAIEKAESELVKIEKDLQFAEAEKARYEGVMTTRVLPDIEMAEAQYRELEENRKES 813

Query: 183  CKKASIICSESEVETLGGCTGSTPEQLTAQINRLKQRLQQESRRHADSIDDLRELYEKKY 362
            C+KASIIC ESE+E LGGC GSTPEQL+  +N+L QRLQ E ++H+DSIDDLR  Y+KK 
Sbjct: 814  CRKASIICPESEIEALGGCDGSTPEQLSVHLNKLNQRLQNECQQHSDSIDDLRMFYQKKE 873

Query: 363  CKIIRKQKTYKAFREKLEVCQNALALRLSKLQRNATFLRRQLTWQFNGHLGKKGISGHTK 542
             KI+RK++TY+AFREKL+ C+ AL LR SK QRNA+ L+RQLTW FNGHLG+KGISG  K
Sbjct: 874  RKILRKRQTYRAFREKLKTCEEALNLRWSKFQRNASDLKRQLTWNFNGHLGEKGISGSIK 933

Query: 543  VNYEHRTLSVEVKMPQDASSSIVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFD 722
            ++YE +TL VEVKMPQDAS S VRDTRGLSGGERSFSTLCFALALH+MTEA FRAMDEFD
Sbjct: 934  ISYEEKTLKVEVKMPQDASCSSVRDTRGLSGGERSFSTLCFALALHQMTEASFRAMDEFD 993

Query: 723  VFMDAVSRKISLDTLVDFALAHGSQWIFITPHDISMVKPSTRVKKQQMAAPRS 881
            VFMDAVSRKISLDTLV FALA GSQWIFITPHDIS VK   R+KKQQ+AAPRS
Sbjct: 994  VFMDAVSRKISLDTLVKFALAQGSQWIFITPHDISGVKHHERIKKQQLAAPRS 1046