BLASTX nr result
ID: Coptis23_contig00002171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002171
(1879 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285267.1| PREDICTED: glutamate decarboxylase 1 [Vitis ... 884 0.0
ref|XP_002528515.1| glutamate decarboxylase, putative [Ricinus c... 881 0.0
ref|XP_002871761.1| hypothetical protein ARALYDRAFT_488599 [Arab... 877 0.0
ref|NP_197235.1| glutamate decarboxylase 1 [Arabidopsis thaliana... 870 0.0
gb|AAZ05070.1| glutamate decarboxylase [Citrus sinensis] 869 0.0
>ref|XP_002285267.1| PREDICTED: glutamate decarboxylase 1 [Vitis vinifera]
Length = 495
Score = 884 bits (2283), Expect = 0.0
Identities = 436/498 (87%), Positives = 466/498 (93%)
Frame = -3
Query: 1682 MVLSKAASESDVSIHSTFASRYVRTSLPRYKMPDNSIPKEAAYQIINDELMLDGNPRLNL 1503
MVLSK ASESDVS+HSTFASRYV+ SLPR+K+P+NSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1 MVLSKTASESDVSVHSTFASRYVKASLPRFKLPENSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 1502 ASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG 1323
ASFVTTWMEPECDKLMM++INKNYVDMDEYPVTTELQNRCVN+IAHLFNAPL DSE AVG
Sbjct: 61 ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPLEDSEAAVG 120
Query: 1322 VGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 1143
VGTVGSSEAIMLAGLAFKRKWQNKR+AEGKP DKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 1142 VKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIEKNKETGWDTP 963
VKLRD YYVMDP KAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL+EKNK+TGWDTP
Sbjct: 181 VKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKQTGWDTP 240
Query: 962 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPDEL 783
IHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV+WR+KEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRSKEDLPEEL 300
Query: 782 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCRENAMVLRKGLEK 603
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGYRN+MENC+ENAM L++GLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCQENAMALKEGLEK 360
Query: 602 TGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMPADAQHVTVLRVV 423
TGRFNI+SKD GVPLVAFSLKD+S HDEFEVADMLRRFGWIVPAYTMP DAQHVTVLRVV
Sbjct: 361 TGRFNIISKDNGVPLVAFSLKDNSCHDEFEVADMLRRFGWIVPAYTMPPDAQHVTVLRVV 420
Query: 422 IREDFSHTLAERLVNDIEKVLLELDHHPAKIQPAAIFSDEKIGGNGTTVKKTALETQKEI 243
+REDFS TLAERLV DI KVL ELD PAK+ +A S E+ NGT +KK+ +ETQ+EI
Sbjct: 421 VREDFSRTLAERLVFDITKVLHELDMLPAKL--SAKISVEEKKQNGTILKKSVIETQREI 478
Query: 242 TDAWKKFVMDRKKTTKAC 189
TDAWKKFVM KKT C
Sbjct: 479 TDAWKKFVM-AKKTNGVC 495
>ref|XP_002528515.1| glutamate decarboxylase, putative [Ricinus communis]
gi|223532075|gb|EEF33884.1| glutamate decarboxylase,
putative [Ricinus communis]
Length = 498
Score = 881 bits (2276), Expect = 0.0
Identities = 430/498 (86%), Positives = 460/498 (92%)
Frame = -3
Query: 1682 MVLSKAASESDVSIHSTFASRYVRTSLPRYKMPDNSIPKEAAYQIINDELMLDGNPRLNL 1503
MVLSK ASESDVS+HSTFASRYVR SLPR+KMP++SIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1 MVLSKTASESDVSVHSTFASRYVRASLPRFKMPESSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 1502 ASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG 1323
ASFVTTWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG 120
Query: 1322 VGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 1143
VGTVGSSEAIMLAGLAFKRKWQNKR+AEGKP DKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 1142 VKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIEKNKETGWDTP 963
VKLRD YYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL EKNK+TGWDTP
Sbjct: 181 VKLRDGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKQTGWDTP 240
Query: 962 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPDEL 783
IHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNK+DLPDEL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKDDLPDEL 300
Query: 782 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCRENAMVLRKGLEK 603
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR+N +VL+ GLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCRDNMLVLKDGLEK 360
Query: 602 TGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMPADAQHVTVLRVV 423
TGRF IVSKD GVPLVAFSLKD+S H+EFE++++LRRFGWIVPAYTMP DAQHVTVLRVV
Sbjct: 361 TGRFTIVSKDNGVPLVAFSLKDNSSHNEFEISELLRRFGWIVPAYTMPPDAQHVTVLRVV 420
Query: 422 IREDFSHTLAERLVNDIEKVLLELDHHPAKIQPAAIFSDEKIGGNGTTVKKTALETQKEI 243
IREDFS T AERLV DIEKVL ELD P++++ +EK KK+ +ETQ+EI
Sbjct: 421 IREDFSRTFAERLVLDIEKVLHELDTLPSRLREKIAIVEEKEKNGTKAAKKSVIETQREI 480
Query: 242 TDAWKKFVMDRKKTTKAC 189
T WKKFV+++KK C
Sbjct: 481 TTIWKKFVLEKKKMNGVC 498
>ref|XP_002871761.1| hypothetical protein ARALYDRAFT_488599 [Arabidopsis lyrata subsp.
lyrata] gi|297317598|gb|EFH48020.1| hypothetical protein
ARALYDRAFT_488599 [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 877 bits (2265), Expect = 0.0
Identities = 432/502 (86%), Positives = 462/502 (92%), Gaps = 4/502 (0%)
Frame = -3
Query: 1682 MVLSKAASESDVSIHSTFASRYVRTSLPRYKMPDNSIPKEAAYQIINDELMLDGNPRLNL 1503
MVLS AASESDVS+HSTFASRYVRTSLPR+KMP+NSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1 MVLSHAASESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 1502 ASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG 1323
ASFVTTWMEPECDKL+MSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLG++ETAVG
Sbjct: 61 ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVG 120
Query: 1322 VGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 1143
VGTVGSSEAIMLAGLAFKRKWQNKR+AEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 1142 VKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIEKNKETGWDTP 963
VKL + YYVMDP KAV+MVDENTICVAAILGSTLNGEFEDVKLLNDLL+EKNKETGWDTP
Sbjct: 181 VKLSEGYYVMDPQKAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTP 240
Query: 962 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPDEL 783
IHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEEL 300
Query: 782 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCRENAMVLRKGLEK 603
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGY N+MENCREN +VLRKGLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYTNVMENCRENMIVLRKGLEK 360
Query: 602 TGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMPADAQHVTVLRVV 423
T RFNIVSKDEGVPLVAFSLKD+S H EFE++DMLRR+GWIVPAYTMP +AQH+TVLRVV
Sbjct: 361 TERFNIVSKDEGVPLVAFSLKDNSSHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVV 420
Query: 422 IREDFSHTLAERLVNDIEKVLLELDHHPAKIQPAAIFSDEKIGGNG----TTVKKTALET 255
IREDFS TLAERLV DIEKV+ ELD P+++ EK N TVKK+ +E
Sbjct: 421 IREDFSRTLAERLVIDIEKVMRELDELPSRVIHKISLGQEKSEANSDNVMVTVKKSDVEK 480
Query: 254 QKEITDAWKKFVMDRKKTTKAC 189
Q++I WKKFV DRKKT+ C
Sbjct: 481 QRDIIIGWKKFVADRKKTSGIC 502
>ref|NP_197235.1| glutamate decarboxylase 1 [Arabidopsis thaliana]
gi|21264439|sp|Q42521.2|DCE1_ARATH RecName:
Full=Glutamate decarboxylase 1; Short=GAD 1
gi|10177078|dbj|BAB10520.1| glutamate decarboxylase 1
(GAD 1) [Arabidopsis thaliana] gi|20453187|gb|AAM19834.1|
AT5g17330/MKP11_18 [Arabidopsis thaliana]
gi|24111355|gb|AAN46801.1| At5g17330/MKP11_18
[Arabidopsis thaliana] gi|332005031|gb|AED92414.1|
glutamate decarboxylase 1 [Arabidopsis thaliana]
Length = 502
Score = 870 bits (2247), Expect = 0.0
Identities = 428/502 (85%), Positives = 460/502 (91%), Gaps = 4/502 (0%)
Frame = -3
Query: 1682 MVLSKAASESDVSIHSTFASRYVRTSLPRYKMPDNSIPKEAAYQIINDELMLDGNPRLNL 1503
MVLS A SESDVS+HSTFASRYVRTSLPR+KMP+NSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1 MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 1502 ASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG 1323
ASFVTTWMEPECDKL+MSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL ++ETAVG
Sbjct: 61 ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVG 120
Query: 1322 VGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 1143
VGTVGSSEAIMLAGLAFKRKWQNKR+AEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 1142 VKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIEKNKETGWDTP 963
VKL + YYVMDP +AV+MVDENTICVAAILGSTLNGEFEDVKLLNDLL+EKNKETGWDTP
Sbjct: 181 VKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTP 240
Query: 962 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPDEL 783
IHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEEL 300
Query: 782 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCRENAMVLRKGLEK 603
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGYRN+MENCREN +VLR+GLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEK 360
Query: 602 TGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMPADAQHVTVLRVV 423
T RFNIVSKDEGVPLVAFSLKD S H EFE++DMLRR+GWIVPAYTMP +AQH+TVLRVV
Sbjct: 361 TERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVV 420
Query: 422 IREDFSHTLAERLVNDIEKVLLELDHHPAKIQPAAIFSDEKIGGNG----TTVKKTALET 255
IREDFS TLAERLV DIEKV+ ELD P+++ EK N TVKK+ ++
Sbjct: 421 IREDFSRTLAERLVIDIEKVMRELDELPSRVIHKISLGQEKSESNSDNLMVTVKKSDIDK 480
Query: 254 QKEITDAWKKFVMDRKKTTKAC 189
Q++I WKKFV DRKKT+ C
Sbjct: 481 QRDIITGWKKFVADRKKTSGIC 502
>gb|AAZ05070.1| glutamate decarboxylase [Citrus sinensis]
Length = 494
Score = 869 bits (2246), Expect = 0.0
Identities = 430/496 (86%), Positives = 458/496 (92%)
Frame = -3
Query: 1682 MVLSKAASESDVSIHSTFASRYVRTSLPRYKMPDNSIPKEAAYQIINDELMLDGNPRLNL 1503
MVLSK SESD SIHSTFASRYVR SLPR+ MP+NSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1 MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 1502 ASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG 1323
ASFVTTWMEPECDKLMM++INKNYVDMDEYPVTTELQNRCVN+IA LFNAPL DSETAVG
Sbjct: 61 ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVG 120
Query: 1322 VGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKE 1143
VGTVGSSEAIMLAGLAFKRKWQNKR+AEGKP DKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 1142 VKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIEKNKETGWDTP 963
VKL + YYVMDP KAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL EKNKETGWDTP
Sbjct: 181 VKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTP 240
Query: 962 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPDEL 783
IHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV+WRNKEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEEL 300
Query: 782 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCRENAMVLRKGLEK 603
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGYRN+MENC ENAMVL++GLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK 360
Query: 602 TGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMPADAQHVTVLRVV 423
TGRFNIVSKDEGVPLVAFSLKD+ RHDEFEVA++LRRFGWIVPAYTMPADAQH+TVLRVV
Sbjct: 361 TGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVV 420
Query: 422 IREDFSHTLAERLVNDIEKVLLELDHHPAKIQPAAIFSDEKIGGNGTTVKKTALETQKEI 243
IREDFS TLAERLV DI KVL ELD P+K+ + + E+ G NG KKT +ETQ+E+
Sbjct: 421 IREDFSRTLAERLVLDITKVLHELDSLPSKV---LVPASEQNGRNG---KKTEIETQREV 474
Query: 242 TDAWKKFVMDRKKTTK 195
T W+KFV +RK K
Sbjct: 475 TTYWRKFVSERKANNK 490