BLASTX nr result
ID: Coptis23_contig00002166
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00002166 (590 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated... 280 1e-73 ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817... 276 1e-72 gb|ACU17953.1| unknown [Glycine max] 275 4e-72 ref|XP_002307426.1| predicted protein [Populus trichocarpa] gi|2... 269 3e-70 emb|CAN68007.1| hypothetical protein VITISV_014949 [Vitis vinifera] 268 4e-70 >ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [Vitis vinifera] gi|302141840|emb|CBI19043.3| unnamed protein product [Vitis vinifera] Length = 320 Score = 280 bits (716), Expect = 1e-73 Identities = 135/183 (73%), Positives = 158/183 (86%) Frame = -2 Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389 SKDQLL L+E+ I++T+Y+HP VLTVE Q KY+GHL GG+SKNL LKDKKHR+Y+VSAL Sbjct: 4 SKDQLLARLQELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIVSAL 63 Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209 T VDLKVLSQRLG+GK GLR AP+EAL +ILQV LGCVTPFAL+N+SAR+VSL LDQG Sbjct: 64 KDTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFLDQG 123 Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29 FK ++ CFFHPLSND++I++KACDLDKFL SI KDPSYVDLEAN +GKDQPPDLA VP Sbjct: 124 FKTKDFCFFHPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAGLVP 183 Query: 28 SSA 20 S A Sbjct: 184 SDA 186 >ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817904 [Glycine max] Length = 322 Score = 276 bits (707), Expect = 1e-72 Identities = 133/183 (72%), Positives = 161/183 (87%) Frame = -2 Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389 SK+QLL LKE+ + +++Y+HPVVLTV+ QA+Y+GHL GG+SKNL LKDKK R Y+VSAL Sbjct: 4 SKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIVSAL 63 Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209 +GT VDLKVLSQRLG+GK GLR AP+EAL ++LQVPLGCVTPFAL+N+SAR+VSLLLDQG Sbjct: 64 AGTKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQG 123 Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29 FK+Q+ CFFHPLSND++ISL ACDLDKFL SI ++PSYVDLE N +GKDQPPDLAA VP Sbjct: 124 FKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAALVP 183 Query: 28 SSA 20 S + Sbjct: 184 SGS 186 >gb|ACU17953.1| unknown [Glycine max] Length = 230 Score = 275 bits (703), Expect = 4e-72 Identities = 132/183 (72%), Positives = 161/183 (87%) Frame = -2 Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389 SK+QLL LKE+ + +++Y+HPVVLTV+ QA+Y+GHL GG+SKNL LKDKK R Y+VSAL Sbjct: 4 SKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIVSAL 63 Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209 +GT V+LKVLSQRLG+GK GLR AP+EAL ++LQVPLGCVTPFAL+N+SAR+VSLLLDQG Sbjct: 64 AGTKVELKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQG 123 Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29 FK+Q+ CFFHPLSND++ISL ACDLDKFL SI ++PSYVDLE N +GKDQPPDLAA VP Sbjct: 124 FKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAALVP 183 Query: 28 SSA 20 S + Sbjct: 184 SGS 186 >ref|XP_002307426.1| predicted protein [Populus trichocarpa] gi|222856875|gb|EEE94422.1| predicted protein [Populus trichocarpa] Length = 287 Score = 269 bits (687), Expect = 3e-70 Identities = 128/184 (69%), Positives = 159/184 (86%) Frame = -2 Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389 +K QLL LKE+ I +++Y+HP VLTVE QAKY+G GG+SKNL LKDKK R+Y+VSAL Sbjct: 4 TKQQLLARLKELQINFSQYEHPTVLTVEAQAKYVGDKGGGLSKNLFLKDKKSRFYIVSAL 63 Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209 + T VD+KVLSQRLG+GK G+R AP+EAL +ILQVPLGCVTPFAL+N+SAR+VSLLLD+G Sbjct: 64 ADTKVDMKVLSQRLGLGKGGIRMAPEEALGEILQVPLGCVTPFALVNESARHVSLLLDKG 123 Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29 F++QE CFFHPLSND++I+L ACDLDKFL SI +DPSY+DLEAN +GKDQPPDLA+ VP Sbjct: 124 FQSQEHCFFHPLSNDMSIALNACDLDKFLKSIGRDPSYIDLEANPTVGKDQPPDLASFVP 183 Query: 28 SSAS 17 S ++ Sbjct: 184 SGST 187 >emb|CAN68007.1| hypothetical protein VITISV_014949 [Vitis vinifera] Length = 610 Score = 268 bits (686), Expect = 4e-70 Identities = 128/174 (73%), Positives = 151/174 (86%) Frame = -2 Query: 541 KEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSALSGTNVDLKV 362 +E+ I++T+Y+HP VLTVE Q KY+GHL GG+SKNL LKDKKHR+Y+VSAL T VDLKV Sbjct: 258 QELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIVSALKDTKVDLKV 317 Query: 361 LSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQGFKAQECCFF 182 LSQRLG+GK GLR AP+EAL +ILQV LGCVTPFAL+N+SAR+VSL LDQGFK ++ CFF Sbjct: 318 LSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFLDQGFKXKDFCFF 377 Query: 181 HPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVPSSA 20 HPLSND++I++KACDLDKFL SI KDPSYVDLEAN +GKDQPPDLA VPS A Sbjct: 378 HPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAGLVPSDA 431