BLASTX nr result

ID: Coptis23_contig00002166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002166
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated...   280   1e-73
ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817...   276   1e-72
gb|ACU17953.1| unknown [Glycine max]                                  275   4e-72
ref|XP_002307426.1| predicted protein [Populus trichocarpa] gi|2...   269   3e-70
emb|CAN68007.1| hypothetical protein VITISV_014949 [Vitis vinifera]   268   4e-70

>ref|XP_002284446.2| PREDICTED: prolyl-tRNA synthetase associated domain-containing
           protein 1-like [Vitis vinifera]
           gi|302141840|emb|CBI19043.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  280 bits (716), Expect = 1e-73
 Identities = 135/183 (73%), Positives = 158/183 (86%)
 Frame = -2

Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389
           SKDQLL  L+E+ I++T+Y+HP VLTVE Q KY+GHL GG+SKNL LKDKKHR+Y+VSAL
Sbjct: 4   SKDQLLARLQELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIVSAL 63

Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209
             T VDLKVLSQRLG+GK GLR AP+EAL +ILQV LGCVTPFAL+N+SAR+VSL LDQG
Sbjct: 64  KDTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFLDQG 123

Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29
           FK ++ CFFHPLSND++I++KACDLDKFL SI KDPSYVDLEAN  +GKDQPPDLA  VP
Sbjct: 124 FKTKDFCFFHPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAGLVP 183

Query: 28  SSA 20
           S A
Sbjct: 184 SDA 186


>ref|XP_003526618.1| PREDICTED: uncharacterized protein LOC100817904 [Glycine max]
          Length = 322

 Score =  276 bits (707), Expect = 1e-72
 Identities = 133/183 (72%), Positives = 161/183 (87%)
 Frame = -2

Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389
           SK+QLL  LKE+ + +++Y+HPVVLTV+ QA+Y+GHL GG+SKNL LKDKK R Y+VSAL
Sbjct: 4   SKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIVSAL 63

Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209
           +GT VDLKVLSQRLG+GK GLR AP+EAL ++LQVPLGCVTPFAL+N+SAR+VSLLLDQG
Sbjct: 64  AGTKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQG 123

Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29
           FK+Q+ CFFHPLSND++ISL ACDLDKFL SI ++PSYVDLE N  +GKDQPPDLAA VP
Sbjct: 124 FKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAALVP 183

Query: 28  SSA 20
           S +
Sbjct: 184 SGS 186


>gb|ACU17953.1| unknown [Glycine max]
          Length = 230

 Score =  275 bits (703), Expect = 4e-72
 Identities = 132/183 (72%), Positives = 161/183 (87%)
 Frame = -2

Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389
           SK+QLL  LKE+ + +++Y+HPVVLTV+ QA+Y+GHL GG+SKNL LKDKK R Y+VSAL
Sbjct: 4   SKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIVSAL 63

Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209
           +GT V+LKVLSQRLG+GK GLR AP+EAL ++LQVPLGCVTPFAL+N+SAR+VSLLLDQG
Sbjct: 64  AGTKVELKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQG 123

Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29
           FK+Q+ CFFHPLSND++ISL ACDLDKFL SI ++PSYVDLE N  +GKDQPPDLAA VP
Sbjct: 124 FKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAALVP 183

Query: 28  SSA 20
           S +
Sbjct: 184 SGS 186


>ref|XP_002307426.1| predicted protein [Populus trichocarpa] gi|222856875|gb|EEE94422.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  269 bits (687), Expect = 3e-70
 Identities = 128/184 (69%), Positives = 159/184 (86%)
 Frame = -2

Query: 568 SKDQLLTCLKEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSAL 389
           +K QLL  LKE+ I +++Y+HP VLTVE QAKY+G   GG+SKNL LKDKK R+Y+VSAL
Sbjct: 4   TKQQLLARLKELQINFSQYEHPTVLTVEAQAKYVGDKGGGLSKNLFLKDKKSRFYIVSAL 63

Query: 388 SGTNVDLKVLSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQG 209
           + T VD+KVLSQRLG+GK G+R AP+EAL +ILQVPLGCVTPFAL+N+SAR+VSLLLD+G
Sbjct: 64  ADTKVDMKVLSQRLGLGKGGIRMAPEEALGEILQVPLGCVTPFALVNESARHVSLLLDKG 123

Query: 208 FKAQECCFFHPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVP 29
           F++QE CFFHPLSND++I+L ACDLDKFL SI +DPSY+DLEAN  +GKDQPPDLA+ VP
Sbjct: 124 FQSQEHCFFHPLSNDMSIALNACDLDKFLKSIGRDPSYIDLEANPTVGKDQPPDLASFVP 183

Query: 28  SSAS 17
           S ++
Sbjct: 184 SGST 187


>emb|CAN68007.1| hypothetical protein VITISV_014949 [Vitis vinifera]
          Length = 610

 Score =  268 bits (686), Expect = 4e-70
 Identities = 128/174 (73%), Positives = 151/174 (86%)
 Frame = -2

Query: 541 KEIGIEYTRYDHPVVLTVEEQAKYIGHLKGGISKNLLLKDKKHRYYLVSALSGTNVDLKV 362
           +E+ I++T+Y+HP VLTVE Q KY+GHL GG+SKNL LKDKKHR+Y+VSAL  T VDLKV
Sbjct: 258 QELQIDFTKYEHPAVLTVEAQEKYVGHLGGGLSKNLFLKDKKHRFYIVSALKDTKVDLKV 317

Query: 361 LSQRLGVGKSGLRKAPQEALQDILQVPLGCVTPFALINDSARNVSLLLDQGFKAQECCFF 182
           LSQRLG+GK GLR AP+EAL +ILQV LGCVTPFAL+N+SAR+VSL LDQGFK ++ CFF
Sbjct: 318 LSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARHVSLFLDQGFKXKDFCFF 377

Query: 181 HPLSNDVTISLKACDLDKFLVSIDKDPSYVDLEANVVIGKDQPPDLAAHVPSSA 20
           HPLSND++I++KACDLDKFL SI KDPSYVDLEAN  +GKDQPPDLA  VPS A
Sbjct: 378 HPLSNDMSIAIKACDLDKFLKSIGKDPSYVDLEANPTVGKDQPPDLAGLVPSDA 431


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