BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002161
         (1525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [R...   106   2e-20
ref|XP_001764413.1| predicted protein [Physcomitrella patens sub...   102   2e-19
ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...   100   1e-18
ref|XP_001771167.1| predicted protein [Physcomitrella patens sub...    99   2e-18
ref|XP_001757597.1| predicted protein [Physcomitrella patens sub...    99   3e-18

>ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223545551|gb|EEF47055.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 113

 Score =  106 bits (264), Expect = 2e-20
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = +3

Query: 33  TAGELACSYACMLLHDDGIPITADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 212
           + GELACSYA M+LHDDGIPITA+KIA LVKAANVQ+E+YWP LFAKL EKRNIEDL+MN
Sbjct: 2   SVGELACSYAVMVLHDDGIPITAEKIAQLVKAANVQIESYWPSLFAKLAEKRNIEDLVMN 61


>ref|XP_001764413.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684277|gb|EDQ70680.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 109

 Score =  102 bits (255), Expect = 2e-19
 Identities = 56/110 (50%), Positives = 64/110 (58%)
 Frame = +3

Query: 33  TAGELACSYACMLLHDDGIPITADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 212
           +  ELAC+YAC++LHDDGI ITADKIAALVKAANVQVE YWPGLFAKL EKR+++DLI N
Sbjct: 2   SVSELACTYACLILHDDGIAITADKIAALVKAANVQVEGYWPGLFAKLCEKRSVDDLITN 61

Query: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDMGFSLFD 362
                                                   D+DMGFSLFD
Sbjct: 62  VGGGGGGAVAVSAAPAASAAAEAAPKEEEKKEEPKEES--DDDMGFSLFD 109


>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score =  100 bits (248), Expect = 1e-18
 Identities = 53/109 (48%), Positives = 64/109 (58%)
 Frame = +3

Query: 36  AGELACSYACMLLHDDGIPITADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMNX 215
           AGELAC+YA ++LHDDGIP+T++KIA LVKAANV VE+YWP LFAKL EK+NI+DL+MN 
Sbjct: 3   AGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVMNV 62

Query: 216 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDMGFSLFD 362
                                                  D+DMGFSLFD
Sbjct: 63  GSGGGAAPVAVSAPAAGAGAAAAAPAVEEKKEEPKEES-DDDMGFSLFD 110


>ref|XP_001771167.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162677547|gb|EDQ64016.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 110

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 55/107 (51%), Positives = 61/107 (57%)
 Frame = +3

Query: 42  ELACSYACMLLHDDGIPITADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMNXXX 221
           E+AC+YAC++LHDDGI ITADKIAALVKAANV VE YWP LFAKL EKR++EDLI N   
Sbjct: 5   EVACTYACLILHDDGIAITADKIAALVKAANVSVEGYWPSLFAKLCEKRSVEDLITN-VG 63

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDMGFSLFD 362
                                                DEDMGFSLFD
Sbjct: 64  GGGGGAVAMSAAPAAGGAAAAVEAPKEVEKEEPKEESDEDMGFSLFD 110


>ref|XP_001757597.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162691291|gb|EDQ77654.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 109

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 55/110 (50%), Positives = 63/110 (57%)
 Frame = +3

Query: 33  TAGELACSYACMLLHDDGIPITADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 212
           +  ELAC+YA ++LHDDGI ITADKIAALVKAANVQVE YWPGLFAKL EKR+++DLI N
Sbjct: 2   SVSELACTYASLILHDDGIAITADKIAALVKAANVQVEGYWPGLFAKLCEKRSVDDLITN 61

Query: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDMGFSLFD 362
                                                   D+DMGFSLFD
Sbjct: 62  VGGGGGGAVAVSAAPAASAAAEAAPKEEEKKEEPKEES--DDDMGFSLFD 109