BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002149
         (1527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   351   3e-94
ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   351   3e-94
emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]   351   3e-94
ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ric...   347   6e-93
ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|2...   346   1e-92

>ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 1 [Vitis vinifera]
            gi|297744598|emb|CBI37860.3| unnamed protein product
            [Vitis vinifera]
          Length = 313

 Score =  351 bits (901), Expect = 3e-94
 Identities = 175/218 (80%), Positives = 191/218 (87%)
 Frame = +3

Query: 558  SKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQETRGISKQKFNEDRKKKIGRL 737
            ++LTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAP E+RGISKQK+ E+RKKKIG+L
Sbjct: 96   TQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKL 155

Query: 738  LDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXXFGWDVFNQKTLYDAYKKRTKNIVCDIE 917
            LD NGLDMKKAYMLDT                 FGWDVFNQKTLY+AYKKRTKNI  DI+
Sbjct: 156  LDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNIEVDID 215

Query: 918  EYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELHDRDDNRKAFSRRRKFHEEKD 1097
            EYNKMKEADPEFYR+ASSLQYGK+PK SE KIDKMVKEL DRD+ R++FSRRRKFHEEKD
Sbjct: 216  EYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKELKDRDEKRQSFSRRRKFHEEKD 275

Query: 1098 IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 1211
            IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 276  IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 313


>ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 2 [Vitis vinifera]
          Length = 295

 Score =  351 bits (901), Expect = 3e-94
 Identities = 175/218 (80%), Positives = 191/218 (87%)
 Frame = +3

Query: 558  SKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQETRGISKQKFNEDRKKKIGRL 737
            ++LTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAP E+RGISKQK+ E+RKKKIG+L
Sbjct: 78   TQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKL 137

Query: 738  LDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXXFGWDVFNQKTLYDAYKKRTKNIVCDIE 917
            LD NGLDMKKAYMLDT                 FGWDVFNQKTLY+AYKKRTKNI  DI+
Sbjct: 138  LDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNIEVDID 197

Query: 918  EYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELHDRDDNRKAFSRRRKFHEEKD 1097
            EYNKMKEADPEFYR+ASSLQYGK+PK SE KIDKMVKEL DRD+ R++FSRRRKFHEEKD
Sbjct: 198  EYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKELKDRDEKRQSFSRRRKFHEEKD 257

Query: 1098 IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 1211
            IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 258  IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 295


>emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]
          Length = 295

 Score =  351 bits (901), Expect = 3e-94
 Identities = 175/218 (80%), Positives = 191/218 (87%)
 Frame = +3

Query: 558  SKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQETRGISKQKFNEDRKKKIGRL 737
            ++LTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAP E+RGISKQK+ E+RKKKIG+L
Sbjct: 78   TQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKL 137

Query: 738  LDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXXFGWDVFNQKTLYDAYKKRTKNIVCDIE 917
            LD NGLDMKKAYMLDT                 FGWDVFNQKTLY+AYKKRTKNI  DI+
Sbjct: 138  LDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNIEVDID 197

Query: 918  EYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELHDRDDNRKAFSRRRKFHEEKD 1097
            EYNKMKEADPEFYR+ASSLQYGK+PK SE KIDKMVKEL DRD+ R++FSRRRKFHEEKD
Sbjct: 198  EYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKELKDRDEKRQSFSRRRKFHEEKD 257

Query: 1098 IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 1211
            IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 258  IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 295


>ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ricinus communis]
            gi|223539559|gb|EEF41147.1| Pre-mRNA-splicing factor
            syf2, putative [Ricinus communis]
          Length = 308

 Score =  347 bits (889), Expect = 6e-93
 Identities = 171/218 (78%), Positives = 190/218 (87%)
 Frame = +3

Query: 558  SKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQETRGISKQKFNEDRKKKIGRL 737
            +KLTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAPQE+RGISKQK+ E+RKKKIG+L
Sbjct: 91   TKLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAPQESRGISKQKWLEERKKKIGKL 150

Query: 738  LDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXXFGWDVFNQKTLYDAYKKRTKNIVCDIE 917
            LDANGLDM KAYMLDT                 FGWDVFNQKTLY+AYKKRT NI  D+E
Sbjct: 151  LDANGLDMTKAYMLDTQEAAEVKYKKWEKGPAPFGWDVFNQKTLYNAYKKRTMNIEVDLE 210

Query: 918  EYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELHDRDDNRKAFSRRRKFHEEKD 1097
            EYNKMKE+DPEFYR+ASSLQYGK+PK+SE K+D+MVKEL DR++ R +FSRRRKF EEKD
Sbjct: 211  EYNKMKESDPEFYREASSLQYGKAPKISEEKVDRMVKELKDREEKRNSFSRRRKFREEKD 270

Query: 1098 IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 1211
            IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 271  IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 308



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 26/35 (74%)
 Frame = +1

Query: 268 EEGRVHPKCINASNPYHECTDYCFLKIAQQPSSAG 372
           EE RVHP CINASNPYHEC +YCF KIA+     G
Sbjct: 3   EERRVHPDCINASNPYHECVEYCFRKIAEAKVRTG 37


>ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|222848492|gb|EEE86039.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  346 bits (887), Expect = 1e-92
 Identities = 170/218 (77%), Positives = 191/218 (87%)
 Frame = +3

Query: 558  SKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQETRGISKQKFNEDRKKKIGRL 737
            ++LTGR+KKLF+LRLKMNEARKANQ AMV+EKK++EAP E+RGISKQK+ EDRKKKIG+L
Sbjct: 91   TQLTGRKKKLFELRLKMNEARKANQTAMVSEKKKMEAPSESRGISKQKWLEDRKKKIGKL 150

Query: 738  LDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXXFGWDVFNQKTLYDAYKKRTKNIVCDIE 917
            LDANGLDM KAYMLDT                 FGWDVFNQKTLY+AYKKRTKN+  D+E
Sbjct: 151  LDANGLDMTKAYMLDTQEAAEVKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNVDVDLE 210

Query: 918  EYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELHDRDDNRKAFSRRRKFHEEKD 1097
            EYNKMKEADPEFYR+ASSLQYGK+PK SE KI++MVKEL DRD+NRK+FSRRR+F +EKD
Sbjct: 211  EYNKMKEADPEFYREASSLQYGKAPKTSEEKIERMVKELKDRDENRKSFSRRRRFRDEKD 270

Query: 1098 IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 1211
            IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 271  IDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 308



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +1

Query: 268 EEGRVHPKCINASNPYHECTDYCFLKIAQQPSSA 369
           +E RVHP CINASNPYHEC +YCF+KIA+  + A
Sbjct: 3   DERRVHPDCINASNPYHECVEYCFIKIAEAKARA 36