BLASTX nr result

ID: Coptis23_contig00002143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002143
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518136.1| 3-ketoacyl-CoA thiolase B, putative [Ricinus...   484   e-135
pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor...   477   e-132
dbj|BAD95031.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana]        476   e-132
pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From A...   476   e-132
ref|XP_002299284.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132

>ref|XP_002518136.1| 3-ketoacyl-CoA thiolase B, putative [Ricinus communis]
            gi|223542732|gb|EEF44269.1| 3-ketoacyl-CoA thiolase B,
            putative [Ricinus communis]
          Length = 460

 Score =  484 bits (1247), Expect = e-135
 Identities = 239/276 (86%), Positives = 260/276 (94%)
 Frame = -3

Query: 926  FQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVESHRKXXXXXXAGKFRDEIIPVATKI 747
            F+QAQNCLLPMGVTSENVA R+GVTRQEQDQAAV+SHRK      AGKF+DEI+PVATKI
Sbjct: 184  FEQAQNCLLPMGVTSENVAHRFGVTRQEQDQAAVDSHRKAAAATAAGKFKDEIVPVATKI 243

Query: 746  VDPKTGEEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMK 567
            VDPKT EEKPITV+VDDGIRP+T+VSDLGKLKPVFKKDG+TTAGNSSQVSDGAGAVLLMK
Sbjct: 244  VDPKTREEKPITVSVDDGIRPNTSVSDLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 303

Query: 566  RSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEINEAFA 387
            R +AM KGLPILGVFRSFAAVGVDPA+MGIGPAVAIPAAVK+AGLEL+DIDLFEINEAFA
Sbjct: 304  RCVAMHKGLPILGVFRSFAAVGVDPAIMGIGPAVAIPAAVKAAGLELNDIDLFEINEAFA 363

Query: 386  SQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMC 207
            SQFVYCRKKLE+DP ++NVNGGA+AIGHPLGATGARCVATLLHEMKRRG+DCRFGV+SMC
Sbjct: 364  SQFVYCRKKLELDPERINVNGGAMAIGHPLGATGARCVATLLHEMKRRGRDCRFGVVSMC 423

Query: 206  IGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDA 99
            IGTGMGAAAV ERGD  DDLCNARK+E +N LSKDA
Sbjct: 424  IGTGMGAAAVFERGDACDDLCNARKVETSNLLSKDA 459


>pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit
            gi|1694621|dbj|BAA11117.1| 3-ketoacyl-CoA thiolase
            [Cucurbita cv. Kurokawa Amakuri]
          Length = 461

 Score =  477 bits (1227), Expect = e-132
 Identities = 231/279 (82%), Positives = 260/279 (93%)
 Frame = -3

Query: 932  QDFQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVESHRKXXXXXXAGKFRDEIIPVAT 753
            +  + AQNCLLPMGVTSENVAQR+GV+R+EQD+AAVESHRK      +GKF+DEIIPV+T
Sbjct: 183  KSMENAQNCLLPMGVTSENVAQRFGVSREEQDKAAVESHRKAAAATASGKFKDEIIPVST 242

Query: 752  KIVDPKTGEEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAVLL 573
            KI+DPKTGEE+P+T++VDDGIRP+TT +DLGKLKPVFKKDG+TTAGNSSQVSDGAGAVLL
Sbjct: 243  KIIDPKTGEERPVTISVDDGIRPNTTQADLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLL 302

Query: 572  MKRSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEINEA 393
            MKRS+AMQKGLPILGVFR+F AVGVDPA+MG+GPAVAIPAAVK+AGLEL+DIDLFEINEA
Sbjct: 303  MKRSVAMQKGLPILGVFRTFTAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEINEA 362

Query: 392  FASQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGVIS 213
            FASQFVYCR KL +DP K+NVNGGA+AIGHPLG TGARCVATLLHEMKRRGKDCRFGVIS
Sbjct: 363  FASQFVYCRNKLGLDPEKINVNGGAIAIGHPLGTTGARCVATLLHEMKRRGKDCRFGVIS 422

Query: 212  MCIGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDAR 96
            MCIGTGMGAAAV ERGDCVD+LCNA+K+E  N LSKDAR
Sbjct: 423  MCIGTGMGAAAVFERGDCVDELCNAKKVEGINLLSKDAR 461


>dbj|BAD95031.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana]
          Length = 343

 Score =  476 bits (1225), Expect = e-132
 Identities = 236/277 (85%), Positives = 258/277 (93%)
 Frame = -3

Query: 926 FQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVESHRKXXXXXXAGKFRDEIIPVATKI 747
           F QAQNCLLPMGVTSENVAQR+GV+RQEQDQAAV+SHRK      AGKF+DEIIPV TK+
Sbjct: 67  FAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKL 126

Query: 746 VDPKTGEEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMK 567
           VDPKTG+EKPITV+VDDGIRP+TT++ LGKLKPVFKKDG+TTAGNSSQVSDGAGAVLLMK
Sbjct: 127 VDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 186

Query: 566 RSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEINEAFA 387
           RS+AMQKGLP+LGVFR+FAAVGVDPA+MGIGPAVAIPAAVK+AGLELDDIDLFEINEAFA
Sbjct: 187 RSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFA 246

Query: 386 SQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMC 207
           SQFVYCR KL +DP K+NVNGGA+AIGHPLGATGARCVATLLHEMKRRGKDCRFGV+SMC
Sbjct: 247 SQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMC 306

Query: 206 IGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDAR 96
           IGTGMGAAAV ERGD VD+L NARK+E    LSKDAR
Sbjct: 307 IGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKDAR 343


>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis
           Thaliana gi|295982058|pdb|2WU9|B Chain B, Crystal
           Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana
          Length = 442

 Score =  476 bits (1225), Expect = e-132
 Identities = 236/277 (85%), Positives = 258/277 (93%)
 Frame = -3

Query: 926 FQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVESHRKXXXXXXAGKFRDEIIPVATKI 747
           F QAQNCLLPMGVTSENVAQR+GV+RQEQDQAAV+SHRK      AGKF+DEIIPV TK+
Sbjct: 166 FAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKL 225

Query: 746 VDPKTGEEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMK 567
           VDPKTG+EKPITV+VDDGIRP+TT++ LGKLKPVFKKDG+TTAGNSSQVSDGAGAVLLMK
Sbjct: 226 VDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 285

Query: 566 RSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEINEAFA 387
           RS+AMQKGLP+LGVFR+FAAVGVDPA+MGIGPAVAIPAAVK+AGLELDDIDLFEINEAFA
Sbjct: 286 RSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFA 345

Query: 386 SQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMC 207
           SQFVYCR KL +DP K+NVNGGA+AIGHPLGATGARCVATLLHEMKRRGKDCRFGV+SMC
Sbjct: 346 SQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMC 405

Query: 206 IGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDAR 96
           IGTGMGAAAV ERGD VD+L NARK+E    LSKDAR
Sbjct: 406 IGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKDAR 442


>ref|XP_002299284.1| predicted protein [Populus trichocarpa] gi|222846542|gb|EEE84089.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  476 bits (1225), Expect = e-132
 Identities = 231/279 (82%), Positives = 262/279 (93%)
 Frame = -3

Query: 932  QDFQQAQNCLLPMGVTSENVAQRYGVTRQEQDQAAVESHRKXXXXXXAGKFRDEIIPVAT 753
            ++FQ+AQ+CLLPMG+TSENVA R+GVTRQEQDQAAV+SHRK      +G+F+DEIIPVAT
Sbjct: 182  KNFQKAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGRFKDEIIPVAT 241

Query: 752  KIVDPKTGEEKPITVAVDDGIRPSTTVSDLGKLKPVFKKDGSTTAGNSSQVSDGAGAVLL 573
            KIVDPKTG+EKPI V+VDDGIRP T+V+ LGKLK VFKKDG+TTAGNSSQ+SDGAGAVLL
Sbjct: 242  KIVDPKTGDEKPIVVSVDDGIRPETSVAGLGKLKTVFKKDGTTTAGNSSQISDGAGAVLL 301

Query: 572  MKRSLAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEINEA 393
            MKRS+A+QKGLPILGVFR+FAAVGVDPA+MG+GPAVAIPAAVK+AGLEL+DIDLFEINEA
Sbjct: 302  MKRSVAVQKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKAAGLELEDIDLFEINEA 361

Query: 392  FASQFVYCRKKLEIDPAKVNVNGGALAIGHPLGATGARCVATLLHEMKRRGKDCRFGVIS 213
            FASQFVYCRKKLE+DP K+NVNGGA+AIGHPLGATGARCVATLLHEMKRRG+DCRFGV+S
Sbjct: 362  FASQFVYCRKKLELDPQKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGRDCRFGVVS 421

Query: 212  MCIGTGMGAAAVLERGDCVDDLCNARKIEINNFLSKDAR 96
            MCIGTGMGAAAV ERGD  D+LCNARK+E NN LSKD+R
Sbjct: 422  MCIGTGMGAAAVFERGDGCDELCNARKVESNNLLSKDSR 460


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