BLASTX nr result

ID: Coptis23_contig00002126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002126
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine...   124   6e-27
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine...   124   6e-27
ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|22353...   122   3e-26
ref|XP_002283521.1| PREDICTED: probable LRR receptor-like serine...   119   2e-25

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/110 (56%), Positives = 76/110 (69%)
 Frame = -2

Query: 330 TRWASLPLVILSLLGNLINGTIPREIGSIATLEELVLQDXXXXXXXXXXXXXXXXXRKAL 151
           T  A +PLV LS LGN ++G+IP+EIG IATLEELVL+D                  + L
Sbjct: 295 TSLAQIPLVTLSALGNRLSGSIPKEIGDIATLEELVLEDNQLEGSLPENLGNLSSLSRLL 354

Query: 150 LGGNNFTGVLPETFGGLTNLTEFRIDGSGITGRIPDFIGNWTRLDRLDMQ 1
           L  NNFTG +PETFG L NLT+ R+DG+  +G+IPDFIGNWT+LDRLDMQ
Sbjct: 355 LTANNFTGTIPETFGNLKNLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQ 404


>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like, partial [Cucumis sativus]
          Length = 993

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/107 (56%), Positives = 77/107 (71%)
 Frame = -2

Query: 321 ASLPLVILSLLGNLINGTIPREIGSIATLEELVLQDXXXXXXXXXXXXXXXXXRKALLGG 142
           A+ PLV LSLLGN +NG+IP+EIG I TLEEL+L+D                 R+ LL  
Sbjct: 96  ANAPLVKLSLLGNRLNGSIPKEIGEIGTLEELILEDNQLTGSLPASLGNLNSLRRLLLSA 155

Query: 141 NNFTGVLPETFGGLTNLTEFRIDGSGITGRIPDFIGNWTRLDRLDMQ 1
           NNFTG +P++FG LTNL +FR+DG+G++G+IP+FIGNW  LDRLDMQ
Sbjct: 156 NNFTGKIPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQ 202


>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Cucumis sativus]
          Length = 1030

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/107 (56%), Positives = 77/107 (71%)
 Frame = -2

Query: 321 ASLPLVILSLLGNLINGTIPREIGSIATLEELVLQDXXXXXXXXXXXXXXXXXRKALLGG 142
           A+ PLV LSLLGN +NG+IP+EIG I TLEEL+L+D                 R+ LL  
Sbjct: 133 ANAPLVKLSLLGNRLNGSIPKEIGEIGTLEELILEDNQLTGSLPASLGNLNSLRRLLLSA 192

Query: 141 NNFTGVLPETFGGLTNLTEFRIDGSGITGRIPDFIGNWTRLDRLDMQ 1
           NNFTG +P++FG LTNL +FR+DG+G++G+IP+FIGNW  LDRLDMQ
Sbjct: 193 NNFTGKIPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQ 239


>ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|223536184|gb|EEF37837.1|
           kinase, putative [Ricinus communis]
          Length = 897

 Score =  122 bits (306), Expect = 3e-26
 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = -2

Query: 330 TRWASLP-LVILSLLGNLINGTIPREIGSIATLEELVLQDXXXXXXXXXXXXXXXXXRKA 154
           TR A LP L ILS LGN +NG+IP EIG+IATLEELVL+D                 R+ 
Sbjct: 135 TRLAQLPNLRILSFLGNRLNGSIPPEIGNIATLEELVLEDNLLGGPLPPSLGNLRNLRRL 194

Query: 153 LLGGNNFTGVLPETFGGLTNLTEFRIDGSGITGRIPDFIGNWTRLDRLDMQ 1
           LL  NNFTG +P+TFG L NLT+FRIDGS ++G+IP+FIGNWT LDRLD+Q
Sbjct: 195 LLSANNFTGTIPDTFGNL-NLTDFRIDGSALSGKIPEFIGNWTTLDRLDLQ 244


>ref|XP_002283521.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Vitis vinifera]
          Length = 1023

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/110 (53%), Positives = 77/110 (70%)
 Frame = -2

Query: 330 TRWASLPLVILSLLGNLINGTIPREIGSIATLEELVLQDXXXXXXXXXXXXXXXXXRKAL 151
           T ++ LPLV LSLLGN ++G+IP+EIG IATLEEL+L+D                 R+ L
Sbjct: 132 TSFSRLPLVNLSLLGNRLSGSIPKEIGGIATLEELILEDNQLEGPLNENLGNLGRLRRLL 191

Query: 150 LGGNNFTGVLPETFGGLTNLTEFRIDGSGITGRIPDFIGNWTRLDRLDMQ 1
           L GNNFTG +P+ F  L NLT+FRIDG+ + G+IPD IGNWT+LD+L +Q
Sbjct: 192 LSGNNFTGTIPQNFRNLKNLTDFRIDGNNLFGKIPDLIGNWTKLDKLFLQ 241


Top