BLASTX nr result

ID: Coptis23_contig00002113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002113
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263193.1| PREDICTED: homeobox-leucine zipper protein H...   308   1e-81
ref|XP_003549927.1| PREDICTED: homeobox-leucine zipper protein H...   303   4e-80
ref|XP_002303365.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80
gb|ADN88093.1| homeodomain-leucine zipper protein HD2 [Gossypium...   303   6e-80
ref|XP_003524058.1| PREDICTED: homeobox-leucine zipper protein H...   302   1e-79

>ref|XP_002263193.1| PREDICTED: homeobox-leucine zipper protein HAT4-like isoform 1
           [Vitis vinifera] gi|296085703|emb|CBI29502.3| unnamed
           protein product [Vitis vinifera]
          Length = 297

 Score =  308 bits (789), Expect = 1e-81
 Identities = 168/251 (66%), Positives = 187/251 (74%), Gaps = 4/251 (1%)
 Frame = +3

Query: 3   FASSDRNSEMYKNETRSFLKGIDVNRMPSSIIDCEEEAGVXXXXXXXXXXXGKRSERETT 182
           F SSDR SE  + + RSFL+GIDVNR+PS+  DCEEEAGV           GKRSERE  
Sbjct: 56  FPSSDRTSETCRGDARSFLRGIDVNRLPSTA-DCEEEAGVSSPNSTISSVSGKRSERE-- 112

Query: 183 ANGEDNDLDERACSRGNNSDEEDGDNCRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXX 362
           ANG+++++ ERACSRG  SDEEDGD  RKKLRLSKDQSAILEE+FKEHNTLNP       
Sbjct: 113 ANGDEHEM-ERACSRGI-SDEEDGDTSRKKLRLSKDQSAILEENFKEHNTLNPKQKLALA 170

Query: 363 XXXSLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLS 542
              +LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LT+ENRRLQKEV ELRALKLS
Sbjct: 171 KQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVNELRALKLS 230

Query: 543 PQFYMHMTPPTTLTMCPSCERVAVSQSSNGSAAPSTAAPLGPQQHRGL---PWA-PNPVH 710
           PQFYM MTPPTTLTMCPSCERVAV   S+ + +   A       HR +   PWA   P+ 
Sbjct: 231 PQFYMQMTPPTTLTMCPSCERVAVPPPSSEARSHQMAT----THHRPIPINPWATATPIP 286

Query: 711 HRPFDLLRPRS 743
           HRPFD L PRS
Sbjct: 287 HRPFDALHPRS 297


>ref|XP_003549927.1| PREDICTED: homeobox-leucine zipper protein HAT4-like [Glycine max]
          Length = 299

 Score =  303 bits (776), Expect = 4e-80
 Identities = 168/248 (67%), Positives = 186/248 (75%), Gaps = 6/248 (2%)
 Frame = +3

Query: 3   FASSDRNSEMYKNETRSFLKGIDVNRMPSSIIDCEEEAGVXXXXXXXXXXXGKRSERETT 182
           F SSDRNS+  + ETRSFL+GIDVNR+PS++ D EEE GV           GKRSERE  
Sbjct: 53  FTSSDRNSDTCRGETRSFLRGIDVNRLPSAV-DTEEETGVSSPNSTVSSVSGKRSEREEP 111

Query: 183 ANGEDNDLDERACSRGNNSDEEDGDNCRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXX 362
            NGE++D+D RACSRG  SDEED +  RKKLRLSKDQSAILEESFKEHNTLNP       
Sbjct: 112 -NGEEHDMD-RACSRGI-SDEEDAETARKKLRLSKDQSAILEESFKEHNTLNPKQKLALA 168

Query: 363 XXXSLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLS 542
               LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT+ENRRLQKEVQELRALKLS
Sbjct: 169 KQLGLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELRALKLS 228

Query: 543 PQFYMHMTPPTTLTMCPSCERVAVSQSSNGSAA---PSTAAPLGPQ-QHRGL-PWA-PNP 704
           PQFYM MTPPTTLTMCPSCERVAV  S+  +A    P   A    Q +HR + PWA  +P
Sbjct: 229 PQFYMQMTPPTTLTMCPSCERVAVPSSAVDAATRHHPMAQAQAQAQIRHRPIGPWASASP 288

Query: 705 VHHRPFDL 728
           + HRPFD+
Sbjct: 289 ITHRPFDV 296


>ref|XP_002303365.1| predicted protein [Populus trichocarpa] gi|222840797|gb|EEE78344.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  303 bits (776), Expect = 4e-80
 Identities = 169/255 (66%), Positives = 188/255 (73%), Gaps = 8/255 (3%)
 Frame = +3

Query: 3   FASSDRNSEMYKNETRSFLKGIDVNRMPSSIIDCEEEAGVXXXXXXXXXXXGKRSERETT 182
           F  SD+NS+ Y+ ETRSFL+GIDVNR+PS+  DCEEEAGV           GKRSERE  
Sbjct: 53  FPPSDQNSDPYRAETRSFLRGIDVNRLPSTA-DCEEEAGVSSPNSTISSISGKRSEREGI 111

Query: 183 ANGEDNDLDERACSRGNNSDEEDGDNCRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXX 362
            NGE++++ ER  SRG  SDEEDGD  RKKLRLSKDQ+AILEESFKEHNTLNP       
Sbjct: 112 -NGEEHEM-ERDYSRGI-SDEEDGDTSRKKLRLSKDQAAILEESFKEHNTLNPKQKMALA 168

Query: 363 XXXSLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLS 542
               LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LT ENRRLQKEVQELRALKLS
Sbjct: 169 KQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTAENRRLQKEVQELRALKLS 228

Query: 543 PQFYMHMTPPTTLTMCPSCERVAVSQSSNGSAAPSTAAPLG--PQQHRGL---PWAPNPV 707
           PQFYM MTPPTTLTMCPSCERVAV  S++ +    +   +G  P  HR +   PWAP   
Sbjct: 229 PQFYMQMTPPTTLTMCPSCERVAVPPSASSTVDARSHPHMGPTPPHHRPIPINPWAPAAP 288

Query: 708 HHR---PFDLLRPRS 743
             R   PFD+LRPRS
Sbjct: 289 ITRGPTPFDVLRPRS 303


>gb|ADN88093.1| homeodomain-leucine zipper protein HD2 [Gossypium hirsutum]
          Length = 300

 Score =  303 bits (775), Expect = 6e-80
 Identities = 167/251 (66%), Positives = 185/251 (73%), Gaps = 5/251 (1%)
 Frame = +3

Query: 6   ASSDRNSEMYKNETRSFLKGIDVNRMPSSIIDCEEEAGVXXXXXXXXXXXGKRSERETTA 185
           A SD N+E ++ ETRSFL+GIDVNR+PS++ DCEE AGV           GKRSERE T 
Sbjct: 58  APSDPNAESFRGETRSFLRGIDVNRLPSTV-DCEEAAGVSSPNSTISSVSGKRSEREGT- 115

Query: 186 NGEDNDLDERACSRGNNSDEEDGDNCRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXX 365
           NG++ D+ ERACSRG  SDEEDGD  RKKLRLSKDQSAILEESFKE+NTLNP        
Sbjct: 116 NGDELDI-ERACSRGI-SDEEDGDASRKKLRLSKDQSAILEESFKENNTLNPKQKMALAK 173

Query: 366 XXSLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLSP 545
              LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LT+ENRRLQKEVQELRALKLSP
Sbjct: 174 QLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 233

Query: 546 QFYMHMTPPTTLTMCPSCERVAVSQSSNGSAAPSTAAPLGPQQHRGL---PWAP--NPVH 710
           QFYM MTPPTTLTMCPSCERV  S + +    P +   L    HR +   PWAP   P+ 
Sbjct: 234 QFYMQMTPPTTLTMCPSCERVGASSTVD----PRSHHQLPQNHHRAIPINPWAPAAAPIP 289

Query: 711 HRPFDLLRPRS 743
           H P D LR RS
Sbjct: 290 HGPLDALRLRS 300


>ref|XP_003524058.1| PREDICTED: homeobox-leucine zipper protein HAT4-like [Glycine max]
          Length = 298

 Score =  302 bits (773), Expect = 1e-79
 Identities = 169/247 (68%), Positives = 184/247 (74%), Gaps = 6/247 (2%)
 Frame = +3

Query: 3   FASSD--RNSEMYKNETRSFLKGIDVNRMPSSIIDCEEEAGVXXXXXXXXXXXGKRSERE 176
           FASSD  RNS+  + ETRSFL+GIDVNR+PS++ D EEEAGV           GKRSERE
Sbjct: 53  FASSDPDRNSDTCRGETRSFLRGIDVNRLPSAV-DAEEEAGVSSPNSTVSCVSGKRSERE 111

Query: 177 TTANGEDNDLDERACSRGNNSDEEDGDNCRKKLRLSKDQSAILEESFKEHNTLNPXXXXX 356
              NGE++D+D RACSRG  SDEED +  RKKLRLSKDQSAILEESFKEHNTLNP     
Sbjct: 112 P--NGEEHDMD-RACSRGI-SDEEDAETSRKKLRLSKDQSAILEESFKEHNTLNPKQKLA 167

Query: 357 XXXXXSLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALK 536
                 LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT+ENRRLQKEVQELRALK
Sbjct: 168 LAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELRALK 227

Query: 537 LSPQFYMHMTPPTTLTMCPSCERVAVSQSSNGSAA---PSTAAPLGPQQHRGLPWA-PNP 704
           LSPQFYM M+PPTTLTMCPSCERVAVS S+ GSA    P   A    +     PWA   P
Sbjct: 228 LSPQFYMQMSPPTTLTMCPSCERVAVSSSAVGSATRHHPMAHAHAHARPMPNGPWASAAP 287

Query: 705 VHHRPFD 725
           + HRPFD
Sbjct: 288 IPHRPFD 294


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