BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002088
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242432.1| uncharacterized protein LOC100800393 [Glycin...   144   1e-32
emb|CBI17455.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002275719.1| PREDICTED: uncharacterized WD repeat-contain...   142   4e-32
ref|XP_003544096.1| PREDICTED: uncharacterized WD repeat-contain...   141   9e-32
ref|XP_002521518.1| WD-repeat protein, putative [Ricinus communi...   139   3e-31

>ref|NP_001242432.1| uncharacterized protein LOC100800393 [Glycine max]
           gi|255642317|gb|ACU21423.1| unknown [Glycine max]
          Length = 477

 Score =  144 bits (363), Expect = 1e-32
 Identities = 74/188 (39%), Positives = 104/188 (55%)
 Frame = +1

Query: 7   MISSLSWVPKGVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTKKINDV 186
           MIS++SWVPKGVSK                                      N + +   
Sbjct: 1   MISAISWVPKGVSKSEPVVADPPPEEEIQEIIASHTTKSGDSDNEVAN----NDEVVAQA 56

Query: 187 SQXXXXXXXXTSFATHDVTDALRELNMDNYDEEEDGVELFGAGIGDTYYASNDMDPFIKK 366
                     ++ +  ++T AL++L+MD YD+E++G+E+F +GIGD YY SNDMDP+IK 
Sbjct: 57  LNVADAVGKASTGSCDEITLALKDLDMDRYDDEDEGIEVFSSGIGDLYYPSNDMDPYIKD 116

Query: 367 GXXXXXXXXXXMIIKPTDAVIVSASHEDDVSQLQVCILEELENGELNFYPHHDIILPAFP 546
                      MII PTD+VIV A  ED+VS L+V ++E+ ++ E+N YPHH+II+PAFP
Sbjct: 117 KNDDDSDELEDMIINPTDSVIVYACTEDEVSYLEVLVIEDADSSEMNVYPHHNIIIPAFP 176

Query: 547 LCTEWFDC 570
           LCT W DC
Sbjct: 177 LCTAWLDC 184


>emb|CBI17455.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  142 bits (358), Expect = 4e-32
 Identities = 65/118 (55%), Positives = 84/118 (71%)
 Frame = +1

Query: 217 TSFATHDVTDALRELNMDNYDEEEDGVELFGAGIGDTYYASNDMDPFIKKGXXXXXXXXX 396
           TSF   D+TD L+EL+MD+YD+E+DG+E+F  G+GDTYY SNDMDP++K           
Sbjct: 82  TSFL--DITDGLKELDMDHYDDEDDGIEVFSKGLGDTYYPSNDMDPYLKDNNDDDSEEVE 139

Query: 397 XMIIKPTDAVIVSASHEDDVSQLQVCILEELENGELNFYPHHDIILPAFPLCTEWFDC 570
            M IK  D+VIV A + DD+S L+V I EE E+G+ N Y HHD+I+PAFPLCT W DC
Sbjct: 140 DMTIKAEDSVIVCARNADDLSHLEVWIFEESEDGDSNMYVHHDVIIPAFPLCTAWLDC 197


>ref|XP_002275719.1| PREDICTED: uncharacterized WD repeat-containing protein
           C17D11.16-like [Vitis vinifera]
          Length = 493

 Score =  142 bits (358), Expect = 4e-32
 Identities = 65/118 (55%), Positives = 84/118 (71%)
 Frame = +1

Query: 217 TSFATHDVTDALRELNMDNYDEEEDGVELFGAGIGDTYYASNDMDPFIKKGXXXXXXXXX 396
           TSF   D+TD L+EL+MD+YD+E+DG+E+F  G+GDTYY SNDMDP++K           
Sbjct: 82  TSFL--DITDGLKELDMDHYDDEDDGIEVFSKGLGDTYYPSNDMDPYLKDNNDDDSEEVE 139

Query: 397 XMIIKPTDAVIVSASHEDDVSQLQVCILEELENGELNFYPHHDIILPAFPLCTEWFDC 570
            M IK  D+VIV A + DD+S L+V I EE E+G+ N Y HHD+I+PAFPLCT W DC
Sbjct: 140 DMTIKAEDSVIVCARNADDLSHLEVWIFEESEDGDSNMYVHHDVIIPAFPLCTAWLDC 197


>ref|XP_003544096.1| PREDICTED: uncharacterized WD repeat-containing protein
           C17D11.16-like [Glycine max]
          Length = 478

 Score =  141 bits (355), Expect = 9e-32
 Identities = 73/188 (38%), Positives = 102/188 (54%)
 Frame = +1

Query: 7   MISSLSWVPKGVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTKKINDV 186
           MIS++SWVPKGVSK                                      N   +   
Sbjct: 1   MISAISWVPKGVSKSELVVAEPPPEEEIQEIIANHATKSGDSDNEDAN----NDDVVAQA 56

Query: 187 SQXXXXXXXXTSFATHDVTDALRELNMDNYDEEEDGVELFGAGIGDTYYASNDMDPFIKK 366
                     ++    ++T AL++L+MD YD+E++G+E+F +GIGD YY SNDMDP+IK 
Sbjct: 57  LTVADAVGKASTGTCDEITLALKDLDMDLYDDEDEGIEVFSSGIGDLYYPSNDMDPYIKD 116

Query: 367 GXXXXXXXXXXMIIKPTDAVIVSASHEDDVSQLQVCILEELENGELNFYPHHDIILPAFP 546
                      MII PTD+V+V A  ED+VS L+V ++E+ ++ E+N YPHH+II+PAFP
Sbjct: 117 KNDDDSEELEDMIINPTDSVVVYACTEDEVSYLEVWVIEDADSSEMNMYPHHNIIIPAFP 176

Query: 547 LCTEWFDC 570
           LCT W DC
Sbjct: 177 LCTAWLDC 184


>ref|XP_002521518.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539196|gb|EEF40789.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 493

 Score =  139 bits (351), Expect = 3e-31
 Identities = 76/196 (38%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
 Frame = +1

Query: 7   MISSLSWVPKGVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NTKKI 177
           MI+++SWVPKGVSK                                         N+K+ 
Sbjct: 1   MIAAVSWVPKGVSKSVPAVAEPPSKEEIEEMINSGALDRGEDSGSEKDDENMEIDNSKQN 60

Query: 178 NDVSQXXXXXXXX-----TSFATHDVTDALRELNMDNYDEEEDGVELFGAGIGDTYYASN 342
           N+V Q             ++    D+T+ L+EL+MDNYDEE++G+ELF  G+GD YY SN
Sbjct: 61  NEVDQALAVADALGRAPKSTIKFDDITEGLKELDMDNYDEEDEGIELFSTGLGDLYYPSN 120

Query: 343 DMDPFIKKGXXXXXXXXXXMIIKPTDAVIVSASHEDDVSQLQVCILEELENGELNFYPHH 522
           + DP++             M I P DAVIV A +ED+ S L+V I+EE ++G+ N Y HH
Sbjct: 121 EADPYLNDNDDEDSEDLEDMTINPKDAVIVCARNEDEFSHLEVWIIEESDDGDSNMYVHH 180

Query: 523 DIILPAFPLCTEWFDC 570
           DIIL AFPLCT W DC
Sbjct: 181 DIILSAFPLCTAWLDC 196