BLASTX nr result

ID: Coptis23_contig00002083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002083
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC83076.1| hypothetical protein OsI_28199 [Oryza sativa Indi...    89   4e-16
ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
gb|EEC83074.1| hypothetical protein OsI_28197 [Oryza sativa Indi...    78   8e-13
ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine...    74   2e-11
ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine...    74   2e-11

>gb|EEC83076.1| hypothetical protein OsI_28199 [Oryza sativa Indica Group]
          Length = 233

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
 Frame = +2

Query: 2   YIDSAGLVGEIPTELANLVNLQTMWASDNPFTGKLPDFIGNWTKLTSL*AICHEFLFGLH 181
           Y DSAGL G  P+ L+ L NL+ + ASDN FTG +PDFIG+ + L  L     ++ F + 
Sbjct: 92  YTDSAGLSGPFPSTLSRLKNLKLLRASDNNFTGTIPDFIGSLSNLEDL--AFQDYSFAVD 149

Query: 182 LIS------TDGTIYEAESSTLGPASYYVEDSTRWAVSNVVLFYQ--NARYIQNTLGQTR 337
             S      +D T+YE +S+ LG +SYYV   TRW VSNV   +Q  N   I ++  + +
Sbjct: 150 CGSNRSIRVSDNTMYELDSTNLGDSSYYVTSQTRWGVSNVGKLFQAPNDSKIIHSGEKIQ 209

Query: 338 GTLDPELFQ 364
             +D ELFQ
Sbjct: 210 NAVDSELFQ 218


>ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|222853580|gb|EEE91127.1|
           predicted protein [Populus trichocarpa]
          Length = 1036

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +2

Query: 2   YIDSAGLVGEIPTELANLVNLQTMWASDNPFTGKLPDFIGNWTKLTSL 145
           Y DS+G+ GEIPT  ANL NL T+WASDN  TG++PDFIGNW+KLTSL
Sbjct: 200 YFDSSGVSGEIPTTFANLQNLATVWASDNELTGRIPDFIGNWSKLTSL 247


>gb|EEC83074.1| hypothetical protein OsI_28197 [Oryza sativa Indica Group]
          Length = 843

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 34/149 (22%)
 Frame = +2

Query: 20  LVGEIPTELANLVNLQTMWASDNPFTGKLPDFIGNWTKLTSL*A---------------- 151
           L G +P EL NL NL ++  S N FTG LP+ +GN TKL  +                  
Sbjct: 168 LSGPLPKELGNLTNLISLGISLNNFTGNLPEELGNLTKLEQMYIDSSGFSGPFPSTISKL 227

Query: 152 ----------ICHEFLFGLHLIST------DGTIYEAESSTLGPASYYVEDSTRWAVSNV 283
                     + H + F +   S       D T+YEA++++LG ASYYV   TRW +SNV
Sbjct: 228 KKLKILYIQELSHNYSFAVDSGSNRSVRGLDNTVYEADATSLGAASYYVTGQTRWGISNV 287

Query: 284 VLFYQ--NARYIQNTLGQTRGTLDPELFQ 364
             F +  N  Y+  +  Q +  LD ELFQ
Sbjct: 288 GKFNEAPNGSYLMYSSQQFQNALDSELFQ 316


>ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Cucumis sativus]
           gi|449493071|ref|XP_004159184.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g56130-like [Cucumis sativus]
          Length = 1122

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = +2

Query: 2   YIDSAGLVGEIPTELANLVNLQTMWASDNPFTGKLPDFIGNWTKLTSL 145
           YIDS+G+ G IP   + L NLQ +WASDN FTG++PDFIGNWT+LTSL
Sbjct: 290 YIDSSGVSGGIPPSFSRLRNLQIVWASDNEFTGRIPDFIGNWTRLTSL 337



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +2

Query: 173 GLHLISTDGTIYEAESSTLGPASYYVEDSTRWAVSNVVLF--YQNARYIQNTLGQTRGTL 346
           G  + S+ G ++E E+  LGPA+Y+V +S RWAVSN   F    N  Y  +T+ Q   TL
Sbjct: 523 GPQIRSSSGVLFERENMALGPATYFVTESQRWAVSNTGYFTGTSNPNYTASTMSQFSNTL 582

Query: 347 DPELFQ 364
           + ELFQ
Sbjct: 583 ESELFQ 588


>ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1037

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +2

Query: 2   YIDSAGLVGEIPTELANLVNLQTMWASDNPFTGKLPDFIGNWTKLTSL 145
           YI+S G+ GEIP+  ANL N+Q M ASD PF+GK+PDFIGNWTKLTSL
Sbjct: 161 YINSLGVGGEIPSTFANLENMQVMRASDCPFSGKIPDFIGNWTKLTSL 208



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = +2

Query: 173 GLHLISTDGTIYEAESSTLGPASYYVEDSTRWAVSNVVLF--YQNARYIQNTLGQTRGTL 346
           G  + + +G +YEAE+STLG ASYYV  + +WAVSNV LF    N  Y+ N L Q  GT 
Sbjct: 392 GSEMRNAEGIVYEAENSTLGAASYYVTSTEKWAVSNVGLFSDRSNPSYVDNNLMQVTGTN 451

Query: 347 DPELFQ 364
            PELFQ
Sbjct: 452 TPELFQ 457


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