BLASTX nr result

ID: Coptis23_contig00002077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002077
         (1445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284962.1| PREDICTED: uncharacterized protein LOC100252...   605   e-170
ref|XP_002515557.1| conserved hypothetical protein [Ricinus comm...   587   e-165
ref|XP_002308647.1| predicted protein [Populus trichocarpa] gi|2...   575   e-161
gb|ABK94923.1| unknown [Populus trichocarpa]                          574   e-161
gb|ACJ84308.1| unknown [Medicago truncatula]                          573   e-161

>ref|XP_002284962.1| PREDICTED: uncharacterized protein LOC100252479 [Vitis vinifera]
          Length = 368

 Score =  605 bits (1559), Expect = e-170
 Identities = 289/364 (79%), Positives = 328/364 (90%), Gaps = 2/364 (0%)
 Frame = -3

Query: 1383 LKQLILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFV 1204
            ++ +  L +LLC TCH+ L+FT GLLPNG+FELGPK S+MKGT VIG +A+PEWE SGF+
Sbjct: 1    MRAVAFLLLLLCATCHIALSFTDGLLPNGNFELGPKPSDMKGTEVIGPHAIPEWETSGFI 60

Query: 1203 EYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFCAARTCAQEERLN 1024
            EYIK+GQKQGDMLLVVPEGAFAVRLGNEASIKQR KV+KGMYY++TF AARTCAQEERLN
Sbjct: 61   EYIKAGQKQGDMLLVVPEGAFAVRLGNEASIKQRVKVIKGMYYSITFSAARTCAQEERLN 120

Query: 1023 VSVAPDSGVLPIQTMYSSNGWDCYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMK 844
            +SVAPD GVLP+QT+YSSNGWD YAWA++A  DV EIVIHNPGVEED ACGPLID++A +
Sbjct: 121  ISVAPDWGVLPMQTLYSSNGWDSYAWAFQADYDVIEIVIHNPGVEEDPACGPLIDSVAFR 180

Query: 843  ALYPPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYID 664
            ALYPPR ++KNLLKNG FEEGPYVFPN SWGVLIPPNIEDDHSPLPGWMVESLKAVKYID
Sbjct: 181  ALYPPRPSSKNLLKNGGFEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMVESLKAVKYID 240

Query: 663  AAHFTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGR 484
            + HF+VPQ +RAVELVAGKESAIAQV RT PG+ YAL+F+VGDASN+CEGSM+VEAFAGR
Sbjct: 241  SDHFSVPQEKRAVELVAGKESAIAQVARTIPGKTYALSFSVGDASNSCEGSMVVEAFAGR 300

Query: 483  DTIKVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKLLS 310
            DTIKVPYES GKGGFKRA+L+F A S RTRIMFLSTFYTM+ D  ASLCGPV+DD+KLLS
Sbjct: 301  DTIKVPYESKGKGGFKRAVLRFVAVSNRTRIMFLSTFYTMRSDDYASLCGPVLDDVKLLS 360

Query: 309  VRNP 298
            +R P
Sbjct: 361  LRTP 364


>ref|XP_002515557.1| conserved hypothetical protein [Ricinus communis]
            gi|1621268|emb|CAB02653.1| unknown [Ricinus communis]
            gi|223545501|gb|EEF47006.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 364

 Score =  587 bits (1512), Expect = e-165
 Identities = 281/360 (78%), Positives = 320/360 (88%), Gaps = 2/360 (0%)
 Frame = -3

Query: 1371 ILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFVEYIK 1192
            ILLSVLL  TC  +L+   GL+ NG+FEL PK S+MKGT VIG+NA+PEWEISGFVEYIK
Sbjct: 5    ILLSVLLLATCQFSLSIRDGLVKNGNFELAPKPSDMKGTQVIGKNAIPEWEISGFVEYIK 64

Query: 1191 SGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFCAARTCAQEERLNVSVA 1012
            SGQKQGDMLLVVPEGA+AVRLGNEASIKQR +V+KGMYY++TF AARTCAQEE+LNVSV+
Sbjct: 65   SGQKQGDMLLVVPEGAYAVRLGNEASIKQRMRVIKGMYYSITFSAARTCAQEEKLNVSVS 124

Query: 1011 PDSGVLPIQTMYSSNGWDCYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMKALYP 832
            PD GVLP+QTMYSSNGWD YAWA++A     ++VIHNPGVEED ACGPLID++A++ALYP
Sbjct: 125  PDWGVLPMQTMYSSNGWDSYAWAFQAEFQYVDLVIHNPGVEEDPACGPLIDSVAIRALYP 184

Query: 831  PRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDAAHF 652
            PR TNKN+LKNG FEEGPYVFPN SWGVLIPPNIEDDHSPLPGWMVESLKAVKYID  HF
Sbjct: 185  PRPTNKNILKNGGFEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDVDHF 244

Query: 651  TVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGRDTIK 472
            +VPQGRRA+ELVAGKESAIAQV RT  G+ Y L+FAVGDASN+CEGSM+VEAFAG+DT+K
Sbjct: 245  SVPQGRRAIELVAGKESAIAQVARTVIGKTYTLSFAVGDASNSCEGSMVVEAFAGKDTLK 304

Query: 471  VPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKLLSVRNP 298
            VPYES GKGGFKRA+L+F A + RTRIMF STFYTM+ D  +SLCGPV+DD+KLLSVR P
Sbjct: 305  VPYESKGKGGFKRAVLRFVAVANRTRIMFYSTFYTMRSDDFSSLCGPVLDDVKLLSVRKP 364


>ref|XP_002308647.1| predicted protein [Populus trichocarpa] gi|222854623|gb|EEE92170.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  575 bits (1482), Expect = e-161
 Identities = 273/359 (76%), Positives = 318/359 (88%), Gaps = 2/359 (0%)
 Frame = -3

Query: 1374 LILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFVEYI 1195
            ++ LSVLL  TCH   +   GL+ NG+FE+GPK SE+KGT +IGR A+P+WEISGFVEYI
Sbjct: 5    MLPLSVLLLATCHFAFSIRDGLVENGNFEVGPKPSELKGTEMIGRYALPKWEISGFVEYI 64

Query: 1194 KSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFCAARTCAQEERLNVSV 1015
            K+GQKQGDMLLVVPEGA+AVRLGNEASIKQ   V KGMYY++TF AARTCAQEE LN+S+
Sbjct: 65   KAGQKQGDMLLVVPEGAYAVRLGNEASIKQVLNVTKGMYYSITFSAARTCAQEEELNISI 124

Query: 1014 APDSGVLPIQTMYSSNGWDCYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMKALY 835
            +P+ GVLP+QTMYSSNGWD YAWA+KA+ D+ E+V+HNPGVEED ACGPLID++A+KALY
Sbjct: 125  SPEWGVLPMQTMYSSNGWDSYAWAFKALLDIVELVVHNPGVEEDPACGPLIDSVAIKALY 184

Query: 834  PPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDAAH 655
            PPR TNKNL+KNG FEEGPY+ PN SWGVLIPPNIED HSPLPGWMVESLKAVK+ID  H
Sbjct: 185  PPRPTNKNLVKNGGFEEGPYLLPNTSWGVLIPPNIEDKHSPLPGWMVESLKAVKFIDVEH 244

Query: 654  FTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGRDTI 475
            F+VPQGRRA+ELVAGKESAIAQVVRT  G+ Y L+FAVGDASN+CEGSM+VEAFAG+DT+
Sbjct: 245  FSVPQGRRAIELVAGKESAIAQVVRTIIGKTYTLSFAVGDASNSCEGSMVVEAFAGKDTV 304

Query: 474  KVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKLLSVR 304
            KVPYES GKGGFKRA+LKF AAS+RTRIMF STFYTM+ D  +SLCGPV+DD+KLLS+R
Sbjct: 305  KVPYESKGKGGFKRAVLKFVAASSRTRIMFYSTFYTMRSDDFSSLCGPVVDDVKLLSLR 363


>gb|ABK94923.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  574 bits (1479), Expect = e-161
 Identities = 272/359 (75%), Positives = 318/359 (88%), Gaps = 2/359 (0%)
 Frame = -3

Query: 1374 LILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFVEYI 1195
            ++ LSVLL  TCH   +   GL+ NG+FE+GPK SE+KGT +IGR A+P+WEISGFVEYI
Sbjct: 5    MLPLSVLLLATCHFAFSIRDGLVENGNFEVGPKPSELKGTEMIGRYALPKWEISGFVEYI 64

Query: 1194 KSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFCAARTCAQEERLNVSV 1015
            K+GQKQGDMLLVVPEGA+AVRLGNEASIKQ   V KGMYY++TF AARTCAQEE LN+S+
Sbjct: 65   KAGQKQGDMLLVVPEGAYAVRLGNEASIKQVLNVTKGMYYSITFSAARTCAQEEELNISI 124

Query: 1014 APDSGVLPIQTMYSSNGWDCYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMKALY 835
            +P+ GVLP+QTMYSSNGWD YAWA+KA+ D+ E+V+HNPGVEED ACGPLID++A+KALY
Sbjct: 125  SPEWGVLPMQTMYSSNGWDSYAWAFKALLDIVELVVHNPGVEEDPACGPLIDSVAIKALY 184

Query: 834  PPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDAAH 655
            PPR TNKNL+KNG FEEGPY+ PN SWGVLIPPNIED HSPLPGWMVESLKAVK+ID  H
Sbjct: 185  PPRPTNKNLVKNGGFEEGPYLLPNTSWGVLIPPNIEDKHSPLPGWMVESLKAVKFIDVEH 244

Query: 654  FTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGRDTI 475
            F+VPQGRRA+ELVAGKESAIAQVVRT  G+ Y L+FAVGDASN+C+GSM+VEAFAG+DT+
Sbjct: 245  FSVPQGRRAIELVAGKESAIAQVVRTIIGKTYTLSFAVGDASNSCQGSMVVEAFAGKDTV 304

Query: 474  KVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKLLSVR 304
            KVPYES GKGGFKRA+LKF AAS+RTRIMF STFYTM+ D  +SLCGPV+DD+KLLS+R
Sbjct: 305  KVPYESKGKGGFKRAVLKFVAASSRTRIMFYSTFYTMRSDDFSSLCGPVVDDVKLLSLR 363


>gb|ACJ84308.1| unknown [Medicago truncatula]
          Length = 376

 Score =  573 bits (1478), Expect = e-161
 Identities = 274/372 (73%), Positives = 326/372 (87%), Gaps = 3/372 (0%)
 Frame = -3

Query: 1404 NTTTATMLKQLILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIG-RNAVP 1228
            N  ++T +   + LS+LLC+T HV+ +   GL+ NG+FELGPK +E+KGTVV G +N++P
Sbjct: 5    NFHSSTTMNVFLFLSLLLCSTFHVSQSLIDGLVANGNFELGPKPTELKGTVVTGGKNSIP 64

Query: 1227 EWEISGFVEYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFCAART 1048
            EWEISG VEY+KSGQKQGDMLLVVPEGA+AVRLGNEASIKQR KV+KGMYY++TF  ART
Sbjct: 65   EWEISGLVEYVKSGQKQGDMLLVVPEGAYAVRLGNEASIKQRIKVIKGMYYSITFMVART 124

Query: 1047 CAQEERLNVSVAPDSGVLPIQTMYSSNGWDCYAWAYKAMSDVAEIVIHNPGVEEDAACGP 868
            CAQEER+N+SVAPD GV+PIQT+Y+S+GWD  A+ +KA  DV E+VIHNPGVEED ACGP
Sbjct: 125  CAQEERINISVAPDFGVIPIQTLYTSSGWDPIAYGFKAEYDVVEMVIHNPGVEEDPACGP 184

Query: 867  LIDAIAMKALYPPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVES 688
            LID++A++ LYPP+A+NKN+LKNG FEEGPY+FPN S+GV+IPPNIEDDHSPLPGWMVES
Sbjct: 185  LIDSVALRTLYPPKASNKNILKNGGFEEGPYIFPNTSYGVIIPPNIEDDHSPLPGWMVES 244

Query: 687  LKAVKYIDAAHFTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSM 508
            LKAVKY+D+AHF+VPQG RAVELVAGKESAIAQV RT PG+ Y L+F+VGDASN+CEGSM
Sbjct: 245  LKAVKYLDSAHFSVPQGTRAVELVAGKESAIAQVARTIPGKTYVLSFSVGDASNSCEGSM 304

Query: 507  IVEAFAGRDTIKVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPV 334
            IVEAFAG+DTIKVPY S GKGGFKRA LKF A  TRTR+MFLSTFY+M+ D  +SLCGPV
Sbjct: 305  IVEAFAGKDTIKVPYTSKGKGGFKRAALKFVAVGTRTRVMFLSTFYSMRSDDLSSLCGPV 364

Query: 333  IDDIKLLSVRNP 298
            IDD+KLLSVR P
Sbjct: 365  IDDVKLLSVRKP 376


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