BLASTX nr result
ID: Coptis23_contig00002074
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00002074 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Rici... 120 1e-25 ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein ... 120 2e-25 ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycin... 119 2e-25 ref|XP_003629287.1| hypothetical protein MTR_8g075400 [Medicago ... 117 1e-24 ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|2... 114 6e-24 >ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Ricinus communis] gi|223534220|gb|EEF35935.1| rRNA-processing protein EBP2, putative [Ricinus communis] Length = 307 Score = 120 bits (301), Expect = 1e-25 Identities = 54/73 (73%), Positives = 64/73 (87%) Frame = +3 Query: 48 VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227 V+L EPSK ++YN+D L +K +DISWP+NV WIHKL+VD+ QEQ+VDVNDDLAREL FYT Sbjct: 46 VKLSEPSKNAVYNRDALNDKLQDISWPENVSWIHKLSVDIEQEQEVDVNDDLARELAFYT 105 Query: 228 QGLEGTRKAFEKL 266 Q LEGTRKAFEKL Sbjct: 106 QALEGTRKAFEKL 118 >ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Glycine max] Length = 287 Score = 120 bits (300), Expect = 2e-25 Identities = 55/73 (75%), Positives = 65/73 (89%) Frame = +3 Query: 48 VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227 VRL EPSK ++YN+D LL+K DISWP NVEWIHKL++DV+QEQ+VDVNDDLAREL FYT Sbjct: 33 VRLAEPSKNAVYNRDALLDKLGDISWPANVEWIHKLSIDVDQEQEVDVNDDLARELAFYT 92 Query: 228 QGLEGTRKAFEKL 266 Q LEGT++AFEKL Sbjct: 93 QALEGTKEAFEKL 105 >ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycine max] gi|255634741|gb|ACU17732.1| unknown [Glycine max] Length = 287 Score = 119 bits (299), Expect = 2e-25 Identities = 54/72 (75%), Positives = 65/72 (90%) Frame = +3 Query: 48 VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227 V+L EPSK ++YN+D LL+K DISWP+NVEWIHKL+VDV+QEQ+VDVNDDLAREL FYT Sbjct: 33 VKLTEPSKNAVYNRDALLDKLGDISWPENVEWIHKLSVDVDQEQEVDVNDDLARELAFYT 92 Query: 228 QGLEGTRKAFEK 263 Q LEGT++AFEK Sbjct: 93 QALEGTKEAFEK 104 >ref|XP_003629287.1| hypothetical protein MTR_8g075400 [Medicago truncatula] gi|355523309|gb|AET03763.1| hypothetical protein MTR_8g075400 [Medicago truncatula] Length = 469 Score = 117 bits (293), Expect = 1e-24 Identities = 53/73 (72%), Positives = 65/73 (89%) Frame = +3 Query: 48 VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227 V+L EPSK ++ N+D LL+K DISWP+NVEWIHKL++D++QEQ+VDVNDDLAREL FYT Sbjct: 98 VKLAEPSKTAVNNRDALLDKLGDISWPENVEWIHKLSIDIDQEQEVDVNDDLARELAFYT 157 Query: 228 QGLEGTRKAFEKL 266 Q LEGTR+AFEKL Sbjct: 158 QALEGTRQAFEKL 170 >ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|222868843|gb|EEF05974.1| predicted protein [Populus trichocarpa] Length = 300 Score = 114 bits (286), Expect = 6e-24 Identities = 51/73 (69%), Positives = 62/73 (84%) Frame = +3 Query: 48 VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227 V+L EPSK +I+N+DGL +K +DISWP+NV WIHKL +D NQEQ+VDVNDDL REL FYT Sbjct: 40 VKLPEPSKNAIFNRDGLADKLQDISWPENVGWIHKLVIDFNQEQEVDVNDDLTRELAFYT 99 Query: 228 QGLEGTRKAFEKL 266 Q LEGTR+A+ KL Sbjct: 100 QALEGTRQAYAKL 112