BLASTX nr result

ID: Coptis23_contig00002074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002074
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Rici...   120   1e-25
ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein ...   120   2e-25
ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycin...   119   2e-25
ref|XP_003629287.1| hypothetical protein MTR_8g075400 [Medicago ...   117   1e-24
ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24

>ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Ricinus communis]
           gi|223534220|gb|EEF35935.1| rRNA-processing protein
           EBP2, putative [Ricinus communis]
          Length = 307

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = +3

Query: 48  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227
           V+L EPSK ++YN+D L +K +DISWP+NV WIHKL+VD+ QEQ+VDVNDDLAREL FYT
Sbjct: 46  VKLSEPSKNAVYNRDALNDKLQDISWPENVSWIHKLSVDIEQEQEVDVNDDLARELAFYT 105

Query: 228 QGLEGTRKAFEKL 266
           Q LEGTRKAFEKL
Sbjct: 106 QALEGTRKAFEKL 118


>ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Glycine
           max]
          Length = 287

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = +3

Query: 48  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227
           VRL EPSK ++YN+D LL+K  DISWP NVEWIHKL++DV+QEQ+VDVNDDLAREL FYT
Sbjct: 33  VRLAEPSKNAVYNRDALLDKLGDISWPANVEWIHKLSIDVDQEQEVDVNDDLARELAFYT 92

Query: 228 QGLEGTRKAFEKL 266
           Q LEGT++AFEKL
Sbjct: 93  QALEGTKEAFEKL 105


>ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycine max]
           gi|255634741|gb|ACU17732.1| unknown [Glycine max]
          Length = 287

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/72 (75%), Positives = 65/72 (90%)
 Frame = +3

Query: 48  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227
           V+L EPSK ++YN+D LL+K  DISWP+NVEWIHKL+VDV+QEQ+VDVNDDLAREL FYT
Sbjct: 33  VKLTEPSKNAVYNRDALLDKLGDISWPENVEWIHKLSVDVDQEQEVDVNDDLARELAFYT 92

Query: 228 QGLEGTRKAFEK 263
           Q LEGT++AFEK
Sbjct: 93  QALEGTKEAFEK 104


>ref|XP_003629287.1| hypothetical protein MTR_8g075400 [Medicago truncatula]
           gi|355523309|gb|AET03763.1| hypothetical protein
           MTR_8g075400 [Medicago truncatula]
          Length = 469

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = +3

Query: 48  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227
           V+L EPSK ++ N+D LL+K  DISWP+NVEWIHKL++D++QEQ+VDVNDDLAREL FYT
Sbjct: 98  VKLAEPSKTAVNNRDALLDKLGDISWPENVEWIHKLSIDIDQEQEVDVNDDLARELAFYT 157

Query: 228 QGLEGTRKAFEKL 266
           Q LEGTR+AFEKL
Sbjct: 158 QALEGTRQAFEKL 170


>ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|222868843|gb|EEF05974.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/73 (69%), Positives = 62/73 (84%)
 Frame = +3

Query: 48  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 227
           V+L EPSK +I+N+DGL +K +DISWP+NV WIHKL +D NQEQ+VDVNDDL REL FYT
Sbjct: 40  VKLPEPSKNAIFNRDGLADKLQDISWPENVGWIHKLVIDFNQEQEVDVNDDLTRELAFYT 99

Query: 228 QGLEGTRKAFEKL 266
           Q LEGTR+A+ KL
Sbjct: 100 QALEGTRQAYAKL 112


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