BLASTX nr result

ID: Coptis23_contig00002058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002058
         (2001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285569.1| PREDICTED: beta-amylase 1, chloroplastic iso...   876   0.0  
emb|CAN71375.1| hypothetical protein VITISV_002992 [Vitis vinifera]   876   0.0  
ref|XP_002518196.1| Beta-amylase, putative [Ricinus communis] gi...   873   0.0  
ref|XP_003534086.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   870   0.0  
ref|XP_004166730.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   869   0.0  

>ref|XP_002285569.1| PREDICTED: beta-amylase 1, chloroplastic isoform 1 [Vitis vinifera]
          Length = 573

 Score =  876 bits (2263), Expect = 0.0
 Identities = 429/576 (74%), Positives = 478/576 (82%), Gaps = 5/576 (0%)
 Frame = +2

Query: 2    GSLSGKPITSSE---TADPTASLNAAAIWKPPTSSNLRCRV--QKQGGXXXXXXXXXXXX 166
            G++SG P+ S     TA+ TA+L+AAA+WK P  + +RCR   + +G             
Sbjct: 11   GAISGTPVVSESGNGTAESTAALSAAAVWKLPLPA-IRCRAGAEIEGLSPPVSPCLSPVM 69

Query: 167  XXXXXXLNVACQALVAERTEFETSWEEKMTTIXXXXXXXXXXXXXXXXVPVYVMMPLDSV 346
                  L+VACQA     TE E +  E+   +                VPVYVMMPLDSV
Sbjct: 70   GGMRADLSVACQAFA---TEIEAAPAEREYRVGGTKAKGKG-------VPVYVMMPLDSV 119

Query: 347  TMGNGVNRKKAMNASLQALKSAGVQGIMMDVWWGLVERDGPGVYNWGGYNELMEMAKKHG 526
            TMGNGVNR+KAM AS+QALKSAGV+G+MMDVWWGLVERD PG YNWGGY EL+EMAK+HG
Sbjct: 120  TMGNGVNRRKAMKASMQALKSAGVEGVMMDVWWGLVERDSPGTYNWGGYAELLEMAKQHG 179

Query: 527  LKVQAVMSFHQCGGNVGDSVSIPLPKWATEEIDKDPDLAYTDQWGRRNYEYISLGCDTLP 706
            LKVQAVMSFHQCGGNVGDS +IPLP W  EEI+KDPDLAYTDQWGRRNYEY+SLG DTLP
Sbjct: 180  LKVQAVMSFHQCGGNVGDSCTIPLPNWVVEEINKDPDLAYTDQWGRRNYEYVSLGSDTLP 239

Query: 707  VLKGRTPVQCYADFMRSFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGI 886
            VLKGRTPVQCYADFMR+F+DNFKHLLGDTIVEIQVGMGPAGE RYPSYPEQ+GTWKFPGI
Sbjct: 240  VLKGRTPVQCYADFMRAFKDNFKHLLGDTIVEIQVGMGPAGEFRYPSYPEQDGTWKFPGI 299

Query: 887  GAFQCYDKYMRSSLKAAAEASGNPKWGSSGPTDAGHYNNWPEDTQFFRRENGGWDSPYGK 1066
            GAFQCYDKYM SSLKAAAEA+G P+WGS+GPTDAGHYNNWPED +FFRRE GGW SPYG+
Sbjct: 300  GAFQCYDKYMLSSLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDARFFRREGGGWTSPYGE 359

Query: 1067 FFLSWYSQMLLDHGERILSSVQSIFEATGVKISVKVAGIHWHYGTRSHAPELTAGYYNTR 1246
            FFL+WYSQMLLDHGERILSS +SIF+  GVKISVKV+GIHWHYGT+SHAPELTAGYYNTR
Sbjct: 360  FFLNWYSQMLLDHGERILSSAKSIFQDMGVKISVKVSGIHWHYGTQSHAPELTAGYYNTR 419

Query: 1247 NHDGYIPIAEMLARYGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATRKVGVPLAGE 1426
              DGYIPIA+MLAR+GAI NFTCIEMRDHEQPQDALCAPEKLVRQVALATR+  VPLAGE
Sbjct: 420  FRDGYIPIAQMLARHGAILNFTCIEMRDHEQPQDALCAPEKLVRQVALATREAQVPLAGE 479

Query: 1427 NALPRYDETAHEQILNASSLNLEEIEQENEMCAFTYLRMNPDLFQADNWRKFVSFVKRMK 1606
            NALPRYDETAHEQIL ASSLN++   +E++MCAFTYLRMNPDLFQ DNWR+FV+FVK+MK
Sbjct: 480  NALPRYDETAHEQILGASSLNID--GEESDMCAFTYLRMNPDLFQPDNWRRFVAFVKKMK 537

Query: 1607 EGKGEKKCWEQVEREAEQFVHITRPLVQEAAVALMH 1714
            EGK   KC E VEREAE  VH+TRPLVQEAAVALMH
Sbjct: 538  EGKDSHKCRELVEREAEHSVHVTRPLVQEAAVALMH 573


>emb|CAN71375.1| hypothetical protein VITISV_002992 [Vitis vinifera]
          Length = 570

 Score =  876 bits (2263), Expect = 0.0
 Identities = 429/576 (74%), Positives = 478/576 (82%), Gaps = 5/576 (0%)
 Frame = +2

Query: 2    GSLSGKPITSSE---TADPTASLNAAAIWKPPTSSNLRCRV--QKQGGXXXXXXXXXXXX 166
            G++SG P+ S     TA+ TA+L+AAA+WK P  + +RCR   + +G             
Sbjct: 8    GAISGTPVVSESGNGTAESTAALSAAAVWKLPLPA-IRCRAGAEIEGLSPPVSPCLSPVM 66

Query: 167  XXXXXXLNVACQALVAERTEFETSWEEKMTTIXXXXXXXXXXXXXXXXVPVYVMMPLDSV 346
                  L+VACQA     TE E +  E+   +                VPVYVMMPLDSV
Sbjct: 67   GGMRADLSVACQAFA---TEIEAAPAEREYRVGGTKAKGKG-------VPVYVMMPLDSV 116

Query: 347  TMGNGVNRKKAMNASLQALKSAGVQGIMMDVWWGLVERDGPGVYNWGGYNELMEMAKKHG 526
            TMGNGVNR+KAM AS+QALKSAGV+G+MMDVWWGLVERD PG YNWGGY EL+EMAK+HG
Sbjct: 117  TMGNGVNRRKAMKASMQALKSAGVEGVMMDVWWGLVERDSPGAYNWGGYAELLEMAKQHG 176

Query: 527  LKVQAVMSFHQCGGNVGDSVSIPLPKWATEEIDKDPDLAYTDQWGRRNYEYISLGCDTLP 706
            LKVQAVMSFHQCGGNVGDS +IPLP W  EEI+KDPDLAYTDQWGRRNYEY+SLG DTLP
Sbjct: 177  LKVQAVMSFHQCGGNVGDSCTIPLPNWVVEEINKDPDLAYTDQWGRRNYEYVSLGSDTLP 236

Query: 707  VLKGRTPVQCYADFMRSFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGI 886
            VLKGRTPVQCYADFMR+F+DNFKHLLGDTIVEIQVGMGPAGE RYPSYPEQ+GTWKFPGI
Sbjct: 237  VLKGRTPVQCYADFMRAFKDNFKHLLGDTIVEIQVGMGPAGEFRYPSYPEQDGTWKFPGI 296

Query: 887  GAFQCYDKYMRSSLKAAAEASGNPKWGSSGPTDAGHYNNWPEDTQFFRRENGGWDSPYGK 1066
            GAFQCYDKYM SSLKAAAEA+G P+WGS+GPTDAGHYNNWPED +FFRRE GGW SPYG+
Sbjct: 297  GAFQCYDKYMLSSLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDARFFRREGGGWTSPYGE 356

Query: 1067 FFLSWYSQMLLDHGERILSSVQSIFEATGVKISVKVAGIHWHYGTRSHAPELTAGYYNTR 1246
            FFL+WYSQMLLDHGERILSS +SIF+  GVKISVKV+GIHWHYGT+SHAPELTAGYYNTR
Sbjct: 357  FFLNWYSQMLLDHGERILSSAKSIFQDMGVKISVKVSGIHWHYGTQSHAPELTAGYYNTR 416

Query: 1247 NHDGYIPIAEMLARYGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATRKVGVPLAGE 1426
              DGYIPIA+MLAR+GAI NFTCIEMRDHEQPQDALCAPEKLVRQVALATR+  VPLAGE
Sbjct: 417  FRDGYIPIAQMLARHGAILNFTCIEMRDHEQPQDALCAPEKLVRQVALATREAQVPLAGE 476

Query: 1427 NALPRYDETAHEQILNASSLNLEEIEQENEMCAFTYLRMNPDLFQADNWRKFVSFVKRMK 1606
            NALPRYDETAHEQIL ASSLN++   +E++MCAFTYLRMNPDLFQ DNWR+FV+FVK+MK
Sbjct: 477  NALPRYDETAHEQILGASSLNID--GEESDMCAFTYLRMNPDLFQPDNWRRFVAFVKKMK 534

Query: 1607 EGKGEKKCWEQVEREAEQFVHITRPLVQEAAVALMH 1714
            EGK   KC E VEREAE  VH+TRPLVQEAAVALMH
Sbjct: 535  EGKDSHKCRELVEREAEHSVHVTRPLVQEAAVALMH 570


>ref|XP_002518196.1| Beta-amylase, putative [Ricinus communis] gi|223542792|gb|EEF44329.1|
            Beta-amylase, putative [Ricinus communis]
          Length = 574

 Score =  873 bits (2255), Expect = 0.0
 Identities = 426/575 (74%), Positives = 475/575 (82%), Gaps = 4/575 (0%)
 Frame = +2

Query: 2    GSLSGKPITSSETADPTASLNAAAIWKPPTSSNLRCRVQK----QGGXXXXXXXXXXXXX 169
            G+L+G PI S+E     ++   +A+WK PT  N RC++QK    +               
Sbjct: 10   GALAGTPI-STEPIPSESTATVSAVWKTPTP-NARCKIQKADTTEQKSQPTSPCMSPILS 67

Query: 170  XXXXXLNVACQALVAERTEFETSWEEKMTTIXXXXXXXXXXXXXXXXVPVYVMMPLDSVT 349
                 L+VAC+A  A+    E S EE+M                   VPVYVMMPLDSVT
Sbjct: 68   GMRADLSVACRAF-ADVATLEPSIEERM-------YRDGGGKEEGKGVPVYVMMPLDSVT 119

Query: 350  MGNGVNRKKAMNASLQALKSAGVQGIMMDVWWGLVERDGPGVYNWGGYNELMEMAKKHGL 529
            M NGVNR+KAMNASLQALKSAGV+GIMMDVWWGLVER+GPGVYNWGGY EL+EMAK+HGL
Sbjct: 120  MNNGVNRRKAMNASLQALKSAGVEGIMMDVWWGLVEREGPGVYNWGGYIELLEMAKRHGL 179

Query: 530  KVQAVMSFHQCGGNVGDSVSIPLPKWATEEIDKDPDLAYTDQWGRRNYEYISLGCDTLPV 709
            KVQAVMSFHQCGGNVGDS +IPLPKW  EEID+D DLAYTDQWGRRNYEY+SLGCDTLPV
Sbjct: 180  KVQAVMSFHQCGGNVGDSCTIPLPKWVVEEIDRDVDLAYTDQWGRRNYEYLSLGCDTLPV 239

Query: 710  LKGRTPVQCYADFMRSFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIG 889
            LKGRTPVQCY+DFMR+FRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTW+FPGIG
Sbjct: 240  LKGRTPVQCYSDFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWRFPGIG 299

Query: 890  AFQCYDKYMRSSLKAAAEASGNPKWGSSGPTDAGHYNNWPEDTQFFRRENGGWDSPYGKF 1069
            AFQCYDKYM SSLKAAAEA+G P+WGS+GPTDAGHYNNWPEDT FF+++ GGW+S YG+F
Sbjct: 300  AFQCYDKYMLSSLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDTPFFKKDGGGWNSIYGEF 359

Query: 1070 FLSWYSQMLLDHGERILSSVQSIFEATGVKISVKVAGIHWHYGTRSHAPELTAGYYNTRN 1249
            FL WYSQMLLDHGERILSS  +IFE TGVKISVKVAGIHWHYGTRSHAPELTAGYYNTR 
Sbjct: 360  FLGWYSQMLLDHGERILSSATAIFENTGVKISVKVAGIHWHYGTRSHAPELTAGYYNTRF 419

Query: 1250 HDGYIPIAEMLARYGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATRKVGVPLAGEN 1429
             DGY+PIA+ML R+GAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALAT++  VPLAGEN
Sbjct: 420  RDGYLPIAQMLGRHGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATQEAQVPLAGEN 479

Query: 1430 ALPRYDETAHEQILNASSLNLEEIEQENEMCAFTYLRMNPDLFQADNWRKFVSFVKRMKE 1609
            ALPRYD+ AHEQIL ASSL++     + EMCAFTYLRMNP LFQ DNWR+FV+FVK+MKE
Sbjct: 480  ALPRYDDFAHEQILQASSLSINGDSDDREMCAFTYLRMNPHLFQEDNWRRFVAFVKKMKE 539

Query: 1610 GKGEKKCWEQVEREAEQFVHITRPLVQEAAVALMH 1714
            GK   +C EQVEREAE FVH++RPLVQEAAVALMH
Sbjct: 540  GKNVDRCREQVEREAEHFVHVSRPLVQEAAVALMH 574


>ref|XP_003534086.1| PREDICTED: beta-amylase 1, chloroplastic-like [Glycine max]
          Length = 569

 Score =  870 bits (2248), Expect = 0.0
 Identities = 424/576 (73%), Positives = 471/576 (81%), Gaps = 5/576 (0%)
 Frame = +2

Query: 2    GSLSGKPITSSETADPTASLNAAAIWKPPTSSNLRCRVQKQGGXXXXXXXXXXXXXXXXX 181
            G+L+G  +  S   + TA+++AAA+WK PT+S L+C+V +  G                 
Sbjct: 10   GTLAGATVPDSSAGESTAAVSAAAVWKSPTAS-LKCKVMRTDGCAEGLSPPLSPCRSPVL 68

Query: 182  X--LNVACQALVAERTEFET---SWEEKMTTIXXXXXXXXXXXXXXXXVPVYVMMPLDSV 346
               L+ ACQA  AE  E E      EEK                    VPV+VMMPLDSV
Sbjct: 69   RADLSAACQAFTAEVAEEEYVAGGKEEK--------------GKGKEGVPVFVMMPLDSV 114

Query: 347  TMGNGVNRKKAMNASLQALKSAGVQGIMMDVWWGLVERDGPGVYNWGGYNELMEMAKKHG 526
            T GN VNRKKAMNA++ ALKSAGV+G+MMDVWWGLVER+ PG YNWGGY ELMEMAKKHG
Sbjct: 115  TAGNAVNRKKAMNAAMAALKSAGVEGVMMDVWWGLVEREKPGEYNWGGYVELMEMAKKHG 174

Query: 527  LKVQAVMSFHQCGGNVGDSVSIPLPKWATEEIDKDPDLAYTDQWGRRNYEYISLGCDTLP 706
            LKVQAVMSFHQCGGNVGDS +IPLPKW  EEID D DLAYTDQWGRRNYEYISLGCDTLP
Sbjct: 175  LKVQAVMSFHQCGGNVGDSCTIPLPKWVVEEIDNDHDLAYTDQWGRRNYEYISLGCDTLP 234

Query: 707  VLKGRTPVQCYADFMRSFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGI 886
            VLKGR+PVQCYADFMR+FRD FKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGI
Sbjct: 235  VLKGRSPVQCYADFMRAFRDTFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGI 294

Query: 887  GAFQCYDKYMRSSLKAAAEASGNPKWGSSGPTDAGHYNNWPEDTQFFRRENGGWDSPYGK 1066
            GAFQCYDKYM SSLKAAAEA G P+WGS+GPTDAGHYNNWPEDTQFFR+E GGWD PYG+
Sbjct: 295  GAFQCYDKYMLSSLKAAAEAHGKPEWGSTGPTDAGHYNNWPEDTQFFRKEGGGWDGPYGE 354

Query: 1067 FFLSWYSQMLLDHGERILSSVQSIFEATGVKISVKVAGIHWHYGTRSHAPELTAGYYNTR 1246
            FFL+WYSQMLL+HG+RILSS  SIF+ TGVKISVKVAGIHWHYGTRSHAPELTAGYYNTR
Sbjct: 355  FFLTWYSQMLLEHGDRILSSATSIFDNTGVKISVKVAGIHWHYGTRSHAPELTAGYYNTR 414

Query: 1247 NHDGYIPIAEMLARYGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATRKVGVPLAGE 1426
              DGY+PIA+MLAR+GAIFNFTCIEMRDHEQPQ+ALCAPEKLV+QVALAT+K  VPLAGE
Sbjct: 415  FRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQEALCAPEKLVKQVALATQKAQVPLAGE 474

Query: 1427 NALPRYDETAHEQILNASSLNLEEIEQENEMCAFTYLRMNPDLFQADNWRKFVSFVKRMK 1606
            NALPRYDE AHEQI+ AS L+++    + EMCAFTYLRMNP LF+ +NWRKFV FVK+MK
Sbjct: 475  NALPRYDEYAHEQIIRASQLDVDGESGDREMCAFTYLRMNPHLFEPNNWRKFVGFVKKMK 534

Query: 1607 EGKGEKKCWEQVEREAEQFVHITRPLVQEAAVALMH 1714
            EGK   KCWE+VEREAE FVH+T+PLVQEAAV LMH
Sbjct: 535  EGKSAHKCWEEVEREAEHFVHVTQPLVQEAAV-LMH 569


>ref|XP_004166730.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 577

 Score =  869 bits (2246), Expect = 0.0
 Identities = 428/579 (73%), Positives = 474/579 (81%), Gaps = 8/579 (1%)
 Frame = +2

Query: 2    GSLSGKPITSSET----ADPTASLNAAAIWKPPTSSNLRCRVQKQGGXXXXXXXXXXXXX 169
            G+L+G P+TS  +     + + ++N A + K  ++S LRCRVQ+  G             
Sbjct: 10   GALAGTPVTSEASNISAGEASLAVNTAMLRKS-SASPLRCRVQRTDGVDALSPPLSPCRS 68

Query: 170  XXXXX----LNVACQALVAERTEFETSWEEKMTTIXXXXXXXXXXXXXXXXVPVYVMMPL 337
                     L+VACQA     TE E   E +                    VPVYVMMPL
Sbjct: 69   PVLGGIRPDLSVACQAFA---TEVEAPTEVR-------EYKEEGEKGKEKGVPVYVMMPL 118

Query: 338  DSVTMGNGVNRKKAMNASLQALKSAGVQGIMMDVWWGLVERDGPGVYNWGGYNELMEMAK 517
            DSVTMGN VNR+KAMNASLQALKSAGV+GIMMDVWWGLVERD PG YNWGGY EL+EMAK
Sbjct: 119  DSVTMGNTVNRRKAMNASLQALKSAGVEGIMMDVWWGLVERDSPGSYNWGGYTELLEMAK 178

Query: 518  KHGLKVQAVMSFHQCGGNVGDSVSIPLPKWATEEIDKDPDLAYTDQWGRRNYEYISLGCD 697
            KHGLKVQAVMSFHQCGGNVGDSV+IPLPKWA EE+DKDPDLAYTDQWGRRNYEYISLGCD
Sbjct: 179  KHGLKVQAVMSFHQCGGNVGDSVTIPLPKWAVEEMDKDPDLAYTDQWGRRNYEYISLGCD 238

Query: 698  TLPVLKGRTPVQCYADFMRSFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKF 877
            TLPVLKGRTPVQCYADFMR+F+DNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKF
Sbjct: 239  TLPVLKGRTPVQCYADFMRAFKDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKF 298

Query: 878  PGIGAFQCYDKYMRSSLKAAAEASGNPKWGSSGPTDAGHYNNWPEDTQFFRRENGGWDSP 1057
            PGIGAFQC+DKYM SSLKAAAEASG P+WGS+GPTDAG Y++WPED  FFR+E GGW+S 
Sbjct: 299  PGIGAFQCFDKYMLSSLKAAAEASGKPEWGSTGPTDAGGYHSWPEDNPFFRKEGGGWNST 358

Query: 1058 YGKFFLSWYSQMLLDHGERILSSVQSIFEATGVKISVKVAGIHWHYGTRSHAPELTAGYY 1237
            YG+FFL+WYSQMLLDHG+RIL++  SIFE TGVKISVK+AGIHWHYG RSHAPELTAGYY
Sbjct: 359  YGEFFLTWYSQMLLDHGDRILTAATSIFEKTGVKISVKIAGIHWHYGHRSHAPELTAGYY 418

Query: 1238 NTRNHDGYIPIAEMLARYGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATRKVGVPL 1417
            NTR  DGY+PIA MLAR+GAIFNFTCIEMRDHEQPQDALCAPEKLVRQVA AT K  VPL
Sbjct: 419  NTRYRDGYLPIARMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVAQATHKAQVPL 478

Query: 1418 AGENALPRYDETAHEQILNASSLNLEEIEQENEMCAFTYLRMNPDLFQADNWRKFVSFVK 1597
            AGENALPRYDE AHEQIL ASS   +E  +E+EMCAFTYLRMNP LF+A+NWR+FV+FVK
Sbjct: 479  AGENALPRYDEFAHEQILQASSFVGDEDSKESEMCAFTYLRMNPHLFEAENWRRFVAFVK 538

Query: 1598 RMKEGKGEKKCWEQVEREAEQFVHITRPLVQEAAVALMH 1714
            +MKEGK   KCWEQVEREAE FVH+T+PLVQEAAVALMH
Sbjct: 539  KMKEGKNPDKCWEQVEREAEHFVHVTQPLVQEAAVALMH 577


Top