BLASTX nr result

ID: Coptis23_contig00002050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002050
         (1686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519023.1| zinc finger protein, putative [Ricinus commu...   162   2e-37
ref|XP_002316631.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-34
ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246...   150   1e-33
ref|XP_002305681.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-33
ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-li...   149   2e-33

>ref|XP_002519023.1| zinc finger protein, putative [Ricinus communis]
            gi|223541686|gb|EEF43234.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 307

 Score =  162 bits (411), Expect = 2e-37
 Identities = 110/296 (37%), Positives = 135/296 (45%), Gaps = 29/296 (9%)
 Frame = +1

Query: 409  MGLSSKQVSGDEFDWAKNLMQNG-ALELPNVTPIRQQQQP----VPTLKCPRCESTNTKF 573
            MGLSSKQVS D  DW+K L+Q    LELP     R+QQQ        LKCPRC+S NTKF
Sbjct: 1    MGLSSKQVSSDGLDWSKTLLQQAQTLELPKPATGRRQQQQNQQQSEPLKCPRCDSINTKF 60

Query: 574  CYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRXXXXXXXXXXXXXXXXXXXXXXX 753
            CYYNNYN+SQPRHFCKSC+RHWTKGGTLRNVPVGGGR                       
Sbjct: 61   CYYNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGRKNKRLKTSKTTAKTAATTTTCTT 120

Query: 754  HGSKIT--------KDLIXXXXXXXXXXXXXXXDERKFSEILYQSLLQSTTSPLVPXXXX 909
              S I+          ++               D++  SEI+ QSL+ S  S ++     
Sbjct: 121  STSNISGKILNTVNPQMVIQAQKQKQNLPLGLGDQKSTSEIMRQSLI-SQPSSVLQQNSI 179

Query: 910  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFNNPTSMSSPFNA-------GFQSPNVLNY 1068
                                           N P   SS F+         FQ+ NV NY
Sbjct: 180  SCSNFVSKSFNTGNNGIFLGTTLSLPQNQELNFPYLNSSSFDTNPSSISNSFQASNVYNY 239

Query: 1069 SGEAKCSEDFSTSATITPMPV--------QL-QIPSTNSEVDSSSYWNWDDLNILI 1209
            S      E    S   T MP         QL Q+P+ +  +D +SYWNWDD++ L+
Sbjct: 240  S----TGETMDDSVITTVMPTASSCITHHQLWQVPNASRGMDITSYWNWDDIDNLV 291


>ref|XP_002316631.1| predicted protein [Populus trichocarpa] gi|222859696|gb|EEE97243.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  152 bits (383), Expect = 3e-34
 Identities = 70/96 (72%), Positives = 77/96 (80%), Gaps = 4/96 (4%)
 Frame = +1

Query: 409 MGLSSKQVSGDEFDWAKNLMQNGALELPNVTPIRQQQQP----VPTLKCPRCESTNTKFC 576
           MGLSSKQV+GD  DW++ L+Q   LELP    IR+QQQ        LKCPRCESTNTKFC
Sbjct: 1   MGLSSKQVTGDGLDWSQTLLQAHTLELPKPPVIRRQQQQNQLQFEPLKCPRCESTNTKFC 60

Query: 577 YYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 684
           YYNNYN+SQPRHFCKSC+RHWTKGG LRNVPVGGGR
Sbjct: 61  YYNNYNKSQPRHFCKSCKRHWTKGGNLRNVPVGGGR 96


>ref|XP_002268276.2| PREDICTED: uncharacterized protein LOC100246521 [Vitis vinifera]
          Length = 295

 Score =  150 bits (378), Expect = 1e-33
 Identities = 69/97 (71%), Positives = 78/97 (80%), Gaps = 5/97 (5%)
 Frame = +1

Query: 409 MGLSSKQVSGDEFDWAKNLMQNGALELPNVTPIR-----QQQQPVPTLKCPRCESTNTKF 573
           M LSSKQVSGD  DW + L+Q G+LEL     +R     QQQQ +  LKCPRC+STNTKF
Sbjct: 1   MVLSSKQVSGDGIDWGQTLLQGGSLELHKPPMMRRQQQQQQQQQLEPLKCPRCDSTNTKF 60

Query: 574 CYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 684
           CY+NNYN+SQPRHFCKSC+RHWTKGGTLRNVPVGGGR
Sbjct: 61  CYFNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGR 97


>ref|XP_002305681.1| predicted protein [Populus trichocarpa] gi|222848645|gb|EEE86192.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  150 bits (378), Expect = 1e-33
 Identities = 68/96 (70%), Positives = 78/96 (81%), Gaps = 4/96 (4%)
 Frame = +1

Query: 409 MGLSSKQVSGDEFDWAKNLMQNGALELPNVTPIRQQQQP----VPTLKCPRCESTNTKFC 576
           MGLSSKQV+ +  DW++ L+Q   LELP    IR+QQQ       +LKCPRCESTNTKFC
Sbjct: 1   MGLSSKQVTSNGLDWSQTLLQERTLELPKPPAIRRQQQQNQLQSESLKCPRCESTNTKFC 60

Query: 577 YYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 684
           YYNNYN+SQPRHFCK+C+RHWTKGGTLRNVPVGGGR
Sbjct: 61  YYNNYNKSQPRHFCKTCKRHWTKGGTLRNVPVGGGR 96


>ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-like [Glycine max]
          Length = 285

 Score =  149 bits (377), Expect = 2e-33
 Identities = 67/94 (71%), Positives = 78/94 (82%), Gaps = 2/94 (2%)
 Frame = +1

Query: 409 MGLSSKQVSGDEFDWAKNLMQNGALELPNVTPIRQQQQPVPT--LKCPRCESTNTKFCYY 582
           MGLSSKQVS    DW + L+Q   LELPN  P+R+QQQ  P+  LKCPRC+S NTKFCYY
Sbjct: 1   MGLSSKQVSNRGLDWNQTLLQAQNLELPNPPPMRKQQQTQPSEPLKCPRCDSINTKFCYY 60

Query: 583 NNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGR 684
           NNYN+SQPRH+C++C+RHWTKGGTLRNVPVGGGR
Sbjct: 61  NNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGGR 94


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